EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPREG00000001470 (Gene tree)
Gene ID: 103460490
Gene Symbol: afg3l2
Alias: si:ch211-12e1.4
Full Name: AFG3 like matrix AAA peptidase subunit 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 15982 bases
Position: chrKK215304.1:272205-288186
Accession: 103460490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002081	RRM_1	PF00076.22	3.2e-29	1	2
ENSPREP00000002081	RRM_1	PF00076.22	3.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002037	-	5770	-	ENSPREP00000001993	919 (aa)	-	-
ENSPRET00000002070	-	5384	-	ENSPREP00000002025	946 (aa)	-	-
ENSPRET00000002051	-	5641	XM_008402683	ENSPREP00000002007	876 (aa)	XP_008400905	UPI0007E9331B
ENSPRET00000002126	-	1632	XM_008402682	ENSPREP00000002081	543 (aa)	XP_008400904	-

Gene Model

Click here to download ENSPREG00000001470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001470	afg3l2	88	76.459	ENSPREG00000005440	puf60b	100	76.258