EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000001561 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-244b2.4
Alias: -
Full Name: uncharacterized LOC103459202
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2467 bases
Position: chrLG23:3170134-3172600
Accession: 103459202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002134	zf-CCCH	PF00642.24	5.2e-10	1	2
ENSPREP00000002134	zf-CCCH	PF00642.24	5.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002179	-	921	XM_008400572	ENSPREP00000002134	306 (aa)	XP_008398794	-

Gene Model

Click here to download ENSPREG00000001561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001561	si:ch211-244b2.4	100	55.932	ENSAPEG00000007620	si:ch211-244b2.4	90	57.099	Amphiprion_percula
ENSPREG00000001561	si:ch211-244b2.4	99	53.258	ENSACLG00000022403	si:ch211-244b2.4	88	56.962	Astatotilapia_calliptera
ENSPREG00000001561	si:ch211-244b2.4	100	64.035	ENSFHEG00000004642	si:ch211-244b2.4	90	64.465	Fundulus_heteroclitus
ENSPREG00000001561	si:ch211-244b2.4	99	53.868	ENSHBUG00000019440	si:ch211-244b2.4	89	56.962	Haplochromis_burtoni
ENSPREG00000001561	si:ch211-244b2.4	66	62.946	ENSKMAG00000009331	si:ch211-244b2.4	71	65.000	Kryptolebias_marmoratus
ENSPREG00000001561	si:ch211-244b2.4	96	60.714	ENSLBEG00000016973	si:ch211-244b2.4	89	55.205	Labrus_bergylta
ENSPREG00000001561	si:ch211-244b2.4	90	38.558	ENSLACG00000012806	-	100	38.871	Latimeria_chalumnae
ENSPREG00000001561	si:ch211-244b2.4	91	56.962	ENSMZEG00005005397	si:ch211-244b2.4	87	56.962	Maylandia_zebra
ENSPREG00000001561	si:ch211-244b2.4	84	54.122	ENSNBRG00000007103	si:ch211-244b2.4	82	54.839	Neolamprologus_brichardi
ENSPREG00000001561	si:ch211-244b2.4	94	55.077	ENSORLG00000015345	si:ch211-244b2.4	87	55.732	Oryzias_latipes
ENSPREG00000001561	si:ch211-244b2.4	94	55.385	ENSORLG00020013462	si:ch211-244b2.4	87	56.051	Oryzias_latipes_hni
ENSPREG00000001561	si:ch211-244b2.4	94	54.769	ENSORLG00015011985	si:ch211-244b2.4	87	55.414	Oryzias_latipes_hsok
ENSPREG00000001561	si:ch211-244b2.4	99	55.821	ENSOMEG00000006058	si:ch211-244b2.4	89	57.190	Oryzias_melastigma
ENSPREG00000001561	si:ch211-244b2.4	92	78.882	ENSPFOG00000008262	si:ch211-244b2.4	93	80.597	Poecilia_formosa
ENSPREG00000001561	si:ch211-244b2.4	92	78.261	ENSPLAG00000010029	si:ch211-244b2.4	93	80.000	Poecilia_latipinna
ENSPREG00000001561	si:ch211-244b2.4	92	77.950	ENSPMEG00000020729	si:ch211-244b2.4	92	79.394	Poecilia_mexicana
ENSPREG00000001561	si:ch211-244b2.4	99	53.090	ENSPNYG00000001424	si:ch211-244b2.4	87	56.962	Pundamilia_nyererei
ENSPREG00000001561	si:ch211-244b2.4	92	52.648	ENSSMAG00000002425	si:ch211-244b2.4	88	53.165	Scophthalmus_maximus