EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000001647 (Gene tree)
Gene ID: 103475870
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6010 bases
Position: chrLG14:13275230-13281239
Accession: 103475870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002220	Nucleoplasmin	PF03066.15	1.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002266	-	2478	XM_008427803	ENSPREP00000002220	299 (aa)	XP_008426025	UPI0004A35869

Gene Model

Click here to download ENSPREG00000001647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001647	npm1a	100	67.333	ENSAPOG00000002813	npm1a	100	68.333	Acanthochromis_polyacanthus
ENSPREG00000001647	npm1a	94	72.085	ENSACIG00000014201	npm1a	100	72.438	Amphilophus_citrinellus
ENSPREG00000001647	npm1a	89	63.158	ENSAOCG00000004978	npm1a	100	61.278	Amphiprion_ocellaris
ENSPREG00000001647	npm1a	100	68.647	ENSAPEG00000008594	npm1a	100	68.977	Amphiprion_percula
ENSPREG00000001647	npm1a	100	70.645	ENSATEG00000008885	npm1a	99	71.242	Anabas_testudineus
ENSPREG00000001647	npm1a	95	67.719	ENSACLG00000008376	npm1a	94	67.719	Astatotilapia_calliptera
ENSPREG00000001647	npm1a	99	52.365	ENSAMXG00000010155	npm1a	99	54.237	Astyanax_mexicanus
ENSPREG00000001647	npm1a	100	56.522	ENSCSEG00000011165	npm1a	83	81.148	Cynoglossus_semilaevis
ENSPREG00000001647	npm1a	100	71.192	ENSCVAG00000008960	npm1a	100	71.523	Cyprinodon_variegatus
ENSPREG00000001647	npm1a	98	62.457	ENSDARG00000014329	npm1a	94	71.053	Danio_rerio
ENSPREG00000001647	npm1a	95	35.913	ENSEBUG00000012753	npm1a	87	36.393	Eptatretus_burgeri
ENSPREG00000001647	npm1a	100	65.232	ENSELUG00000013705	npm1a	100	66.556	Esox_lucius
ENSPREG00000001647	npm1a	100	73.179	ENSFHEG00000012496	npm1a	100	72.848	Fundulus_heteroclitus
ENSPREG00000001647	npm1a	100	86.424	ENSGAFG00000013059	npm1a	100	86.755	Gambusia_affinis
ENSPREG00000001647	npm1a	99	66.443	ENSGACG00000020319	npm1a	99	65.772	Gasterosteus_aculeatus
ENSPREG00000001647	npm1a	99	68.038	ENSHBUG00000000776	npm1a	100	69.304	Haplochromis_burtoni
ENSPREG00000001647	npm1a	100	52.427	ENSHCOG00000001059	npm1a	98	53.115	Hippocampus_comes
ENSPREG00000001647	npm1a	98	61.589	ENSIPUG00000019452	npm1	99	61.258	Ictalurus_punctatus
ENSPREG00000001647	npm1a	100	72.757	ENSKMAG00000010709	npm1a	100	72.425	Kryptolebias_marmoratus
ENSPREG00000001647	npm1a	100	69.079	ENSLBEG00000008793	npm1a	99	68.667	Labrus_bergylta
ENSPREG00000001647	npm1a	85	52.000	ENSLOCG00000009683	npm1a	100	51.636	Lepisosteus_oculatus
ENSPREG00000001647	npm1a	100	69.103	ENSMAMG00000009344	npm1a	82	69.360	Mastacembelus_armatus
ENSPREG00000001647	npm1a	99	70.064	ENSMZEG00005013717	npm1a	100	70.382	Maylandia_zebra
ENSPREG00000001647	npm1a	95	66.667	ENSMMOG00000007980	npm1a	100	66.316	Mola_mola
ENSPREG00000001647	npm1a	100	67.320	ENSMALG00000001146	npm1a	100	68.627	Monopterus_albus
ENSPREG00000001647	npm1a	99	64.984	ENSNBRG00000013172	npm1a	100	65.931	Neolamprologus_brichardi
ENSPREG00000001647	npm1a	99	65.781	ENSONIG00000001860	npm1a	99	68.092	Oreochromis_niloticus
ENSPREG00000001647	npm1a	100	68.000	ENSORLG00000010179	npm1a	100	68.333	Oryzias_latipes
ENSPREG00000001647	npm1a	100	67.667	ENSORLG00020020817	npm1a	100	68.333	Oryzias_latipes_hni
ENSPREG00000001647	npm1a	100	68.000	ENSORLG00015003439	npm1a	100	68.333	Oryzias_latipes_hsok
ENSPREG00000001647	npm1a	100	70.667	ENSOMEG00000007083	npm1a	100	70.333	Oryzias_melastigma
ENSPREG00000001647	npm1a	100	54.870	ENSPKIG00000023943	npm1a	100	52.961	Paramormyrops_kingsleyae
ENSPREG00000001647	npm1a	100	56.908	ENSPMGG00000011716	npm1a	100	57.237	Periophthalmus_magnuspinnatus
ENSPREG00000001647	npm1a	100	90.698	ENSPFOG00000019173	npm1a	100	91.362	Poecilia_formosa
ENSPREG00000001647	npm1a	100	87.789	ENSPLAG00000001093	npm1a	100	88.119	Poecilia_latipinna
ENSPREG00000001647	npm1a	100	90.698	ENSPMEG00000012523	npm1a	100	91.362	Poecilia_mexicana
ENSPREG00000001647	npm1a	99	70.740	ENSPNYG00000019321	npm1a	100	72.026	Pundamilia_nyererei
ENSPREG00000001647	npm1a	99	57.426	ENSPNAG00000026891	npm1a	99	57.947	Pygocentrus_nattereri
ENSPREG00000001647	npm1a	100	56.908	ENSSFOG00015007074	npm1a	100	56.908	Scleropages_formosus
ENSPREG00000001647	npm1a	100	68.977	ENSSMAG00000019090	npm1a	100	68.977	Scophthalmus_maximus
ENSPREG00000001647	npm1a	100	68.977	ENSSDUG00000015609	npm1a	100	69.307	Seriola_dumerili
ENSPREG00000001647	npm1a	100	70.530	ENSSLDG00000017849	npm1a	100	70.530	Seriola_lalandi_dorsalis
ENSPREG00000001647	npm1a	100	58.528	ENSSPAG00000021660	npm1a	100	60.000	Stegastes_partitus
ENSPREG00000001647	npm1a	100	67.857	ENSTRUG00000024003	npm1a	100	68.317	Takifugu_rubripes
ENSPREG00000001647	npm1a	100	68.106	ENSTNIG00000010773	npm1a	100	68.439	Tetraodon_nigroviridis
ENSPREG00000001647	npm1a	99	76.254	ENSXCOG00000005958	npm1a	100	80.702	Xiphophorus_couchianus
ENSPREG00000001647	npm1a	100	88.449	ENSXMAG00000000396	npm1a	100	88.449	Xiphophorus_maculatus