EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001797 (Gene tree)
Gene ID: 103477144
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12859 bases
Position: chrLG15:21893834-21906692
Accession: 103477144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002442	KH_1	PF00013.29	7.8e-54	1	3
ENSPREP00000002442	KH_1	PF00013.29	7.8e-54	2	3
ENSPREP00000002442	KH_1	PF00013.29	7.8e-54	3	3
ENSPREP00000002450	KH_1	PF00013.29	2.1e-36	1	2
ENSPREP00000002450	KH_1	PF00013.29	2.1e-36	2	2
ENSPREP00000002450	KH_2	PF07650.17	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002498	-	731	-	ENSPREP00000002450	226 (aa)	-	-
ENSPRET00000002490	-	1320	XM_008430061	ENSPREP00000002442	428 (aa)	XP_008428283	UPI0004A3C918

Gene Model

Click here to download ENSPREG00000001797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001797	zgc:110045	82	40.000	ENSPREG00000002843	hnrpkl	63	43.243
ENSPREG00000001797	zgc:110045	76	71.681	ENSPREG00000021498	-	68	71.681
ENSPREG00000001797	zgc:110045	76	32.911	ENSPREG00000001808	igf2bp3	63	32.335
ENSPREG00000001797	zgc:110045	75	40.000	ENSPREG00000018996	hnrnpk	57	42.667
ENSPREG00000001797	zgc:110045	81	30.986	ENSPREG00000015101	FUBP3	69	30.909
ENSPREG00000001797	zgc:110045	71	31.690	ENSPREG00000007009	igf2bp1	60	31.690
ENSPREG00000001797	zgc:110045	68	41.818	ENSPREG00000009440	igf2bp2b	61	35.252
ENSPREG00000001797	zgc:110045	69	39.062	ENSPREG00000018946	-	60	39.062
ENSPREG00000001797	zgc:110045	92	69.856	ENSPREG00000015736	pcbp3	97	69.775
ENSPREG00000001797	zgc:110045	92	72.947	ENSPREG00000007742	PCBP2	95	69.716
ENSPREG00000001797	zgc:110045	68	30.645	ENSPREG00000003168	-	78	30.645
ENSPREG00000001797	zgc:110045	98	50.224	ENSPREG00000017370	-	98	50.673
ENSPREG00000001797	zgc:110045	92	72.464	ENSPREG00000006202	pcbp2	95	69.206
ENSPREG00000001797	zgc:110045	94	76.056	ENSPREG00000020585	-	94	75.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001797	zgc:110045	94	77.358	ENSG00000183570	PCBP3	96	69.855	Homo_sapiens
ENSPREG00000001797	zgc:110045	95	97.674	ENSAPOG00000023735	zgc:110045	97	96.835	Acanthochromis_polyacanthus
ENSPREG00000001797	zgc:110045	97	91.324	ENSACIG00000002577	zgc:110045	99	91.705	Amphilophus_citrinellus
ENSPREG00000001797	zgc:110045	89	93.035	ENSAOCG00000005266	zgc:110045	94	93.035	Amphiprion_ocellaris
ENSPREG00000001797	zgc:110045	100	92.166	ENSAPEG00000000729	zgc:110045	100	92.166	Amphiprion_percula
ENSPREG00000001797	zgc:110045	97	85.507	ENSATEG00000011191	zgc:110045	100	85.507	Anabas_testudineus
ENSPREG00000001797	zgc:110045	100	92.396	ENSACLG00000019285	zgc:110045	100	92.627	Astatotilapia_calliptera
ENSPREG00000001797	zgc:110045	94	77.358	ENSBTAG00000030775	PCBP3	96	69.275	Bos_taurus
ENSPREG00000001797	zgc:110045	94	77.358	ENSCAFG00000011907	PCBP3	88	72.289	Canis_familiaris
ENSPREG00000001797	zgc:110045	94	73.585	ENSCHIG00000015841	PCBP3	87	69.670	Capra_hircus
ENSPREG00000001797	zgc:110045	91	70.536	ENSTSYG00000005254	PCBP3	93	68.067	Carlito_syrichta
ENSPREG00000001797	zgc:110045	94	53.991	ENSCAPG00000006767	PCBP3	81	55.319	Cavia_aperea
ENSPREG00000001797	zgc:110045	94	77.358	ENSCPOG00000003648	PCBP3	87	72.866	Cavia_porcellus
ENSPREG00000001797	zgc:110045	94	77.358	ENSCCAG00000024561	PCBP3	99	65.507	Cebus_capucinus
ENSPREG00000001797	zgc:110045	94	77.358	ENSCATG00000038419	PCBP3	88	76.677	Cercocebus_atys
ENSPREG00000001797	zgc:110045	94	77.358	ENSCLAG00000006667	PCBP3	87	72.866	Chinchilla_lanigera
ENSPREG00000001797	zgc:110045	94	77.358	ENSCANG00000026757	PCBP3	88	76.677	Colobus_angolensis_palliatus
ENSPREG00000001797	zgc:110045	94	77.358	ENSCGRG00001006836	Pcbp3	87	72.866	Cricetulus_griseus_chok1gshd
ENSPREG00000001797	zgc:110045	94	77.358	ENSCGRG00000001837	Pcbp3	87	72.866	Cricetulus_griseus_crigri
ENSPREG00000001797	zgc:110045	95	95.814	ENSCSEG00000010020	zgc:110045	99	92.308	Cynoglossus_semilaevis
ENSPREG00000001797	zgc:110045	92	91.388	ENSCVAG00000004726	zgc:110045	93	91.388	Cyprinodon_variegatus
ENSPREG00000001797	zgc:110045	95	80.465	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSPREG00000001797	zgc:110045	94	77.358	ENSDNOG00000049518	PCBP3	89	72.072	Dasypus_novemcinctus
ENSPREG00000001797	zgc:110045	93	69.869	ENSDORG00000003640	Pcbp3	93	69.130	Dipodomys_ordii
ENSPREG00000001797	zgc:110045	89	75.743	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSPREG00000001797	zgc:110045	94	76.887	ENSEASG00005007068	PCBP3	88	76.358	Equus_asinus_asinus
ENSPREG00000001797	zgc:110045	94	76.887	ENSECAG00000012413	PCBP3	88	76.358	Equus_caballus
ENSPREG00000001797	zgc:110045	100	82.759	ENSELUG00000019784	zgc:110045	100	82.759	Esox_lucius
ENSPREG00000001797	zgc:110045	94	77.358	ENSFCAG00000014812	PCBP3	88	76.358	Felis_catus
ENSPREG00000001797	zgc:110045	94	77.358	ENSFDAG00000009117	PCBP3	86	77.273	Fukomys_damarensis
ENSPREG00000001797	zgc:110045	89	94.030	ENSFHEG00000018838	-	92	94.030	Fundulus_heteroclitus
ENSPREG00000001797	zgc:110045	91	90.000	ENSGMOG00000005953	zgc:110045	95	90.354	Gadus_morhua
ENSPREG00000001797	zgc:110045	98	96.861	ENSGAFG00000017864	zgc:110045	98	96.861	Gambusia_affinis
ENSPREG00000001797	zgc:110045	59	95.337	ENSGAFG00000017860	-	100	95.337	Gambusia_affinis
ENSPREG00000001797	zgc:110045	94	95.305	ENSGACG00000003044	zgc:110045	97	94.904	Gasterosteus_aculeatus
ENSPREG00000001797	zgc:110045	94	77.358	ENSGGOG00000003683	PCBP3	88	76.677	Gorilla_gorilla
ENSPREG00000001797	zgc:110045	95	97.209	ENSHBUG00000012495	zgc:110045	97	96.835	Haplochromis_burtoni
ENSPREG00000001797	zgc:110045	94	77.358	ENSHGLG00000018620	PCBP3	87	72.866	Heterocephalus_glaber_female
ENSPREG00000001797	zgc:110045	94	77.358	ENSHGLG00100013590	PCBP3	87	72.866	Heterocephalus_glaber_male
ENSPREG00000001797	zgc:110045	97	87.727	ENSHCOG00000000818	zgc:110045	99	88.073	Hippocampus_comes
ENSPREG00000001797	zgc:110045	95	77.315	ENSIPUG00000003932	zgc:110045	97	66.160	Ictalurus_punctatus
ENSPREG00000001797	zgc:110045	94	77.358	ENSSTOG00000007178	PCBP3	87	72.866	Ictidomys_tridecemlineatus
ENSPREG00000001797	zgc:110045	92	78.744	ENSJJAG00000021192	Pcbp3	87	73.171	Jaculus_jaculus
ENSPREG00000001797	zgc:110045	86	94.872	ENSKMAG00000016179	-	95	94.872	Kryptolebias_marmoratus
ENSPREG00000001797	zgc:110045	89	96.040	ENSLBEG00000023074	zgc:110045	97	87.688	Labrus_bergylta
ENSPREG00000001797	zgc:110045	94	74.528	ENSLAFG00000020835	PCBP3	96	74.359	Loxodonta_africana
ENSPREG00000001797	zgc:110045	94	77.358	ENSMFAG00000034574	PCBP3	88	76.677	Macaca_fascicularis
ENSPREG00000001797	zgc:110045	94	77.358	ENSMMUG00000003825	PCBP3	99	70.898	Macaca_mulatta
ENSPREG00000001797	zgc:110045	94	77.358	ENSMNEG00000035551	PCBP3	95	77.597	Macaca_nemestrina
ENSPREG00000001797	zgc:110045	94	77.358	ENSMLEG00000038785	PCBP3	97	68.944	Mandrillus_leucophaeus
ENSPREG00000001797	zgc:110045	95	95.349	ENSMAMG00000014389	zgc:110045	99	95.223	Mastacembelus_armatus
ENSPREG00000001797	zgc:110045	100	92.396	ENSMZEG00005011785	zgc:110045	100	92.627	Maylandia_zebra
ENSPREG00000001797	zgc:110045	92	78.744	ENSMAUG00000007036	Pcbp3	87	72.866	Mesocricetus_auratus
ENSPREG00000001797	zgc:110045	94	76.887	ENSMICG00000012679	PCBP3	88	76.358	Microcebus_murinus
ENSPREG00000001797	zgc:110045	94	77.358	ENSMOCG00000016127	Pcbp3	87	72.866	Microtus_ochrogaster
ENSPREG00000001797	zgc:110045	58	83.246	ENSMMOG00000008398	-	100	83.246	Mola_mola
ENSPREG00000001797	zgc:110045	89	90.547	ENSMMOG00000008399	zgc:110045	95	90.547	Mola_mola
ENSPREG00000001797	zgc:110045	88	89.447	ENSMALG00000008763	zgc:110045	96	89.447	Monopterus_albus
ENSPREG00000001797	zgc:110045	94	77.358	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.362	Mus_caroli
ENSPREG00000001797	zgc:110045	94	77.358	ENSMUSG00000001120	Pcbp3	99	73.362	Mus_musculus
ENSPREG00000001797	zgc:110045	94	77.358	MGP_PahariEiJ_G0030889	Pcbp3	99	73.362	Mus_pahari
ENSPREG00000001797	zgc:110045	94	77.358	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.362	Mus_spretus
ENSPREG00000001797	zgc:110045	94	77.358	ENSMLUG00000003074	PCBP3	88	72.072	Myotis_lucifugus
ENSPREG00000001797	zgc:110045	94	77.358	ENSNGAG00000005416	Pcbp3	87	72.866	Nannospalax_galili
ENSPREG00000001797	zgc:110045	100	92.396	ENSNBRG00000017646	zgc:110045	100	92.627	Neolamprologus_brichardi
ENSPREG00000001797	zgc:110045	94	77.358	ENSNLEG00000002639	PCBP3	88	76.677	Nomascus_leucogenys
ENSPREG00000001797	zgc:110045	91	74.107	ENSMEUG00000012960	PCBP3	96	66.667	Notamacropus_eugenii
ENSPREG00000001797	zgc:110045	94	73.585	ENSODEG00000012873	PCBP3	87	70.427	Octodon_degus
ENSPREG00000001797	zgc:110045	95	97.209	ENSONIG00000010370	zgc:110045	100	90.187	Oreochromis_niloticus
ENSPREG00000001797	zgc:110045	92	73.778	ENSOANG00000006265	PCBP3	88	72.908	Ornithorhynchus_anatinus
ENSPREG00000001797	zgc:110045	95	97.209	ENSORLG00000014385	-	100	89.631	Oryzias_latipes
ENSPREG00000001797	zgc:110045	95	96.744	ENSORLG00020003139	zgc:110045	100	88.915	Oryzias_latipes_hni
ENSPREG00000001797	zgc:110045	95	96.744	ENSOMEG00000015459	-	100	91.244	Oryzias_melastigma
ENSPREG00000001797	zgc:110045	94	73.113	ENSOARG00000012704	PCBP3	88	69.789	Ovis_aries
ENSPREG00000001797	zgc:110045	94	77.358	ENSPPAG00000021940	PCBP3	88	76.677	Pan_paniscus
ENSPREG00000001797	zgc:110045	94	77.358	ENSPPRG00000003933	PCBP3	88	76.358	Panthera_pardus
ENSPREG00000001797	zgc:110045	94	56.744	ENSPTIG00000012038	PCBP3	83	73.810	Panthera_tigris_altaica
ENSPREG00000001797	zgc:110045	93	47.393	ENSPTRG00000014010	PCBP3	97	50.852	Pan_troglodytes
ENSPREG00000001797	zgc:110045	94	77.358	ENSPANG00000023631	PCBP3	88	76.677	Papio_anubis
ENSPREG00000001797	zgc:110045	100	75.632	ENSPMGG00000021588	-	99	75.632	Periophthalmus_magnuspinnatus
ENSPREG00000001797	zgc:110045	94	58.605	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSPREG00000001797	zgc:110045	94	77.358	ENSPEMG00000000587	Pcbp3	87	72.866	Peromyscus_maniculatus_bairdii
ENSPREG00000001797	zgc:110045	66	72.269	ENSPMAG00000004719	zgc:110045	93	72.269	Petromyzon_marinus
ENSPREG00000001797	zgc:110045	94	99.528	ENSPFOG00000002348	zgc:110045	100	96.687	Poecilia_formosa
ENSPREG00000001797	zgc:110045	98	93.274	ENSPLAG00000017488	zgc:110045	98	93.274	Poecilia_latipinna
ENSPREG00000001797	zgc:110045	98	96.861	ENSPMEG00000012762	zgc:110045	98	96.861	Poecilia_mexicana
ENSPREG00000001797	zgc:110045	88	77.487	ENSPPYG00000011525	-	94	69.732	Pongo_abelii
ENSPREG00000001797	zgc:110045	90	59.910	ENSPCAG00000001454	PCBP3	98	58.065	Procavia_capensis
ENSPREG00000001797	zgc:110045	94	76.887	ENSPCOG00000013797	PCBP3	88	76.358	Propithecus_coquereli
ENSPREG00000001797	zgc:110045	93	71.179	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSPREG00000001797	zgc:110045	97	91.781	ENSPNYG00000004637	zgc:110045	99	92.166	Pundamilia_nyererei
ENSPREG00000001797	zgc:110045	59	85.204	ENSPNYG00000004656	-	98	85.714	Pundamilia_nyererei
ENSPREG00000001797	zgc:110045	95	80.930	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSPREG00000001797	zgc:110045	94	77.358	ENSRROG00000034567	PCBP3	88	76.677	Rhinopithecus_roxellana
ENSPREG00000001797	zgc:110045	94	77.358	ENSSBOG00000005789	PCBP3	88	76.677	Saimiri_boliviensis_boliviensis
ENSPREG00000001797	zgc:110045	95	96.744	ENSSMAG00000013541	zgc:110045	100	90.509	Scophthalmus_maximus
ENSPREG00000001797	zgc:110045	96	91.594	ENSSDUG00000019371	zgc:110045	100	91.594	Seriola_dumerili
ENSPREG00000001797	zgc:110045	100	92.857	ENSSLDG00000021064	zgc:110045	100	92.857	Seriola_lalandi_dorsalis
ENSPREG00000001797	zgc:110045	61	79.562	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSPREG00000001797	zgc:110045	95	97.674	ENSSPAG00000000563	zgc:110045	97	97.152	Stegastes_partitus
ENSPREG00000001797	zgc:110045	94	77.358	ENSSSCG00000023041	PCBP3	88	76.358	Sus_scrofa
ENSPREG00000001797	zgc:110045	88	92.965	ENSTRUG00000017789	zgc:110045	98	92.965	Takifugu_rubripes
ENSPREG00000001797	zgc:110045	84	85.567	ENSTNIG00000003546	zgc:110045	96	85.567	Tetraodon_nigroviridis
ENSPREG00000001797	zgc:110045	92	57.488	ENSTBEG00000011882	-	71	59.483	Tupaia_belangeri
ENSPREG00000001797	zgc:110045	94	73.585	ENSUAMG00000006491	PCBP3	96	75.725	Ursus_americanus
ENSPREG00000001797	zgc:110045	84	71.574	ENSUMAG00000025403	PCBP3	87	64.371	Ursus_maritimus
ENSPREG00000001797	zgc:110045	94	72.170	ENSVVUG00000023862	PCBP3	95	64.048	Vulpes_vulpes
ENSPREG00000001797	zgc:110045	80	94.737	ENSXCOG00000005968	zgc:110045	96	94.737	Xiphophorus_couchianus
ENSPREG00000001797	zgc:110045	100	98.376	ENSXMAG00000008030	zgc:110045	100	98.376	Xiphophorus_maculatus