EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000001843 (Gene tree)
Gene ID: 103468870
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7235 bases
Position: chrLG8:11698005-11705239
Accession: 103468870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002540	RRM_1	PF00076.22	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002588	RNPS1-201	4934	XM_008416248	ENSPREP00000002540	280 (aa)	XP_008414470	UPI0004440683

Gene Model

Click here to download ENSPREG00000001843's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001843	RNPS1	75	63.889	ENSG00000205937	RNPS1	86	63.699	Homo_sapiens
ENSPREG00000001843	RNPS1	77	80.930	ENSAPOG00000017310	RNPS1	69	78.037	Acanthochromis_polyacanthus
ENSPREG00000001843	RNPS1	76	70.561	ENSACIG00000014367	-	77	70.561	Amphilophus_citrinellus
ENSPREG00000001843	RNPS1	77	75.463	ENSAOCG00000002404	RNPS1	77	77.315	Amphiprion_ocellaris
ENSPREG00000001843	RNPS1	76	75.349	ENSAPEG00000006497	RNPS1	74	77.209	Amphiprion_percula
ENSPREG00000001843	RNPS1	77	79.167	ENSATEG00000024267	RNPS1	77	81.944	Anabas_testudineus
ENSPREG00000001843	RNPS1	70	61.881	ENSANAG00000028802	RNPS1	79	66.010	Aotus_nancymaae
ENSPREG00000001843	RNPS1	75	65.258	ENSACLG00000021537	-	81	68.981	Astatotilapia_calliptera
ENSPREG00000001843	RNPS1	77	80.930	ENSACLG00000025942	RNPS1	77	78.140	Astatotilapia_calliptera
ENSPREG00000001843	RNPS1	77	77.064	ENSAMXG00000006330	-	81	67.327	Astyanax_mexicanus
ENSPREG00000001843	RNPS1	75	63.889	ENSBTAG00000009969	RNPS1	77	67.742	Bos_taurus
ENSPREG00000001843	RNPS1	75	63.889	ENSCJAG00000014969	RNPS1	90	67.442	Callithrix_jacchus
ENSPREG00000001843	RNPS1	75	63.889	ENSTSYG00000001629	RNPS1	77	67.742	Carlito_syrichta
ENSPREG00000001843	RNPS1	75	63.889	ENSCPOG00000002066	RNPS1	77	67.742	Cavia_porcellus
ENSPREG00000001843	RNPS1	75	63.889	ENSCATG00000013756	RNPS1	83	66.502	Cercocebus_atys
ENSPREG00000001843	RNPS1	75	63.889	ENSCLAG00000015546	RNPS1	77	67.742	Chinchilla_lanigera
ENSPREG00000001843	RNPS1	75	68.664	ENSCSAG00000005219	-	72	66.820	Chlorocebus_sabaeus
ENSPREG00000001843	RNPS1	75	49.296	ENSCPBG00000000214	RNPS1	74	52.315	Chrysemys_picta_bellii
ENSPREG00000001843	RNPS1	75	63.889	ENSCANG00000041307	RNPS1	84	69.608	Colobus_angolensis_palliatus
ENSPREG00000001843	RNPS1	75	63.889	ENSCGRG00001020431	Rnps1	77	67.742	Cricetulus_griseus_chok1gshd
ENSPREG00000001843	RNPS1	75	63.889	ENSCGRG00000014021	Rnps1	77	67.742	Cricetulus_griseus_crigri
ENSPREG00000001843	RNPS1	76	77.315	ENSCSEG00000000402	RNPS1	71	68.519	Cynoglossus_semilaevis
ENSPREG00000001843	RNPS1	76	74.419	ENSCSEG00000015997	RNPS1	75	75.349	Cynoglossus_semilaevis
ENSPREG00000001843	RNPS1	100	97.500	ENSCVAG00000010868	RNPS1	100	97.500	Cyprinodon_variegatus
ENSPREG00000001843	RNPS1	77	70.776	ENSDARG00000100188	RNPS1	77	73.516	Danio_rerio
ENSPREG00000001843	RNPS1	77	70.776	ENSDARG00000116743	rnps1	77	73.516	Danio_rerio
ENSPREG00000001843	RNPS1	75	64.352	ENSFCAG00000007690	RNPS1	80	66.505	Felis_catus
ENSPREG00000001843	RNPS1	75	63.426	ENSFDAG00000003386	RNPS1	77	67.281	Fukomys_damarensis
ENSPREG00000001843	RNPS1	100	96.797	ENSFHEG00000011705	RNPS1	100	96.797	Fundulus_heteroclitus
ENSPREG00000001843	RNPS1	100	99.286	ENSGAFG00000005457	RNPS1	100	99.286	Gambusia_affinis
ENSPREG00000001843	RNPS1	77	80.645	ENSGACG00000011261	RNPS1	77	88.940	Gasterosteus_aculeatus
ENSPREG00000001843	RNPS1	77	64.977	ENSGACG00000005641	-	77	65.899	Gasterosteus_aculeatus
ENSPREG00000001843	RNPS1	75	63.889	ENSGGOG00000014275	RNPS1	86	66.341	Gorilla_gorilla
ENSPREG00000001843	RNPS1	75	65.258	ENSHBUG00000017337	-	77	68.981	Haplochromis_burtoni
ENSPREG00000001843	RNPS1	77	80.465	ENSHBUG00000002494	RNPS1	77	77.674	Haplochromis_burtoni
ENSPREG00000001843	RNPS1	75	57.746	ENSHGLG00000013666	-	72	60.563	Heterocephalus_glaber_female
ENSPREG00000001843	RNPS1	75	63.889	ENSHGLG00000013957	RNPS1	77	67.742	Heterocephalus_glaber_female
ENSPREG00000001843	RNPS1	75	65.741	ENSHGLG00100001721	-	69	61.395	Heterocephalus_glaber_male
ENSPREG00000001843	RNPS1	75	57.746	ENSHGLG00100011327	-	72	60.563	Heterocephalus_glaber_male
ENSPREG00000001843	RNPS1	75	63.889	ENSHGLG00100003539	RNPS1	77	67.742	Heterocephalus_glaber_male
ENSPREG00000001843	RNPS1	75	80.645	ENSHCOG00000004424	RNPS1	78	81.900	Hippocampus_comes
ENSPREG00000001843	RNPS1	77	69.231	ENSIPUG00000011746	rnps1	85	70.588	Ictalurus_punctatus
ENSPREG00000001843	RNPS1	75	63.889	ENSJJAG00000015576	-	77	67.742	Jaculus_jaculus
ENSPREG00000001843	RNPS1	76	93.427	ENSKMAG00000009135	RNPS1	77	93.488	Kryptolebias_marmoratus
ENSPREG00000001843	RNPS1	75	74.286	ENSLBEG00000024091	RNPS1	77	74.766	Labrus_bergylta
ENSPREG00000001843	RNPS1	77	66.055	ENSLOCG00000001758	RNPS1	77	66.055	Lepisosteus_oculatus
ENSPREG00000001843	RNPS1	75	63.889	ENSMFAG00000042142	RNPS1	79	66.667	Macaca_fascicularis
ENSPREG00000001843	RNPS1	79	65.351	ENSMFAG00000044121	-	74	61.751	Macaca_fascicularis
ENSPREG00000001843	RNPS1	75	63.889	ENSMLEG00000036928	RNPS1	79	66.667	Mandrillus_leucophaeus
ENSPREG00000001843	RNPS1	72	64.423	ENSMLEG00000040232	-	81	65.385	Mandrillus_leucophaeus
ENSPREG00000001843	RNPS1	75	78.404	ENSMAMG00000021148	-	76	73.148	Mastacembelus_armatus
ENSPREG00000001843	RNPS1	76	81.308	ENSMAMG00000021609	-	77	84.259	Mastacembelus_armatus
ENSPREG00000001843	RNPS1	76	65.421	ENSMZEG00005006256	-	78	69.124	Maylandia_zebra
ENSPREG00000001843	RNPS1	77	80.930	ENSMZEG00005012742	RNPS1	77	78.140	Maylandia_zebra
ENSPREG00000001843	RNPS1	75	63.426	ENSMICG00000031543	RNPS1	77	67.281	Microcebus_murinus
ENSPREG00000001843	RNPS1	75	63.889	ENSMOCG00000003429	Rnps1	77	67.742	Microtus_ochrogaster
ENSPREG00000001843	RNPS1	96	56.884	ENSMOCG00000000276	-	67	54.460	Microtus_ochrogaster
ENSPREG00000001843	RNPS1	76	74.528	ENSMMOG00000010863	RNPS1	77	75.234	Mola_mola
ENSPREG00000001843	RNPS1	76	76.995	ENSMALG00000016619	RNPS1	68	80.465	Monopterus_albus
ENSPREG00000001843	RNPS1	75	63.889	ENSMUSG00000034681	Rnps1	77	67.742	Mus_musculus
ENSPREG00000001843	RNPS1	75	63.889	MGP_PahariEiJ_G0023498	Rnps1	77	67.742	Mus_pahari
ENSPREG00000001843	RNPS1	75	63.889	MGP_SPRETEiJ_G0022092	Rnps1	77	67.742	Mus_spretus
ENSPREG00000001843	RNPS1	75	63.889	ENSNGAG00000023702	Rnps1	77	67.742	Nannospalax_galili
ENSPREG00000001843	RNPS1	76	74.766	ENSNBRG00000023437	RNPS1	77	75.234	Neolamprologus_brichardi
ENSPREG00000001843	RNPS1	76	65.421	ENSNBRG00000014540	-	79	69.124	Neolamprologus_brichardi
ENSPREG00000001843	RNPS1	88	63.600	ENSNLEG00000009243	RNPS1	87	67.281	Nomascus_leucogenys
ENSPREG00000001843	RNPS1	76	65.421	ENSONIG00000019627	-	78	69.124	Oreochromis_niloticus
ENSPREG00000001843	RNPS1	73	77.561	ENSORLG00000008033	RNPS1	94	70.732	Oryzias_latipes
ENSPREG00000001843	RNPS1	76	72.430	ENSORLG00020020207	RNPS1	75	70.755	Oryzias_latipes_hni
ENSPREG00000001843	RNPS1	76	72.897	ENSORLG00015000305	-	75	71.226	Oryzias_latipes_hsok
ENSPREG00000001843	RNPS1	75	62.736	ENSORLG00015011183	RNPS1	67	68.075	Oryzias_latipes_hsok
ENSPREG00000001843	RNPS1	87	59.677	ENSPPAG00000011845	RNPS1	80	62.500	Pan_paniscus
ENSPREG00000001843	RNPS1	75	64.352	ENSPPRG00000011255	RNPS1	80	66.505	Panthera_pardus
ENSPREG00000001843	RNPS1	50	61.871	ENSPTIG00000015643	RNPS1	52	80.000	Panthera_tigris_altaica
ENSPREG00000001843	RNPS1	75	63.889	ENSPTRG00000031310	RNPS1	79	66.667	Pan_troglodytes
ENSPREG00000001843	RNPS1	75	63.889	ENSPANG00000015748	RNPS1	79	66.667	Papio_anubis
ENSPREG00000001843	RNPS1	77	72.273	ENSPKIG00000023465	RNPS1	77	68.636	Paramormyrops_kingsleyae
ENSPREG00000001843	RNPS1	68	72.487	ENSPMGG00000015888	-	77	73.832	Periophthalmus_magnuspinnatus
ENSPREG00000001843	RNPS1	75	63.889	ENSPEMG00000012797	Rnps1	77	67.742	Peromyscus_maniculatus_bairdii
ENSPREG00000001843	RNPS1	75	63.426	ENSPCIG00000025012	RNPS1	77	67.281	Phascolarctos_cinereus
ENSPREG00000001843	RNPS1	100	100.000	ENSPFOG00000009978	RNPS1	100	100.000	Poecilia_formosa
ENSPREG00000001843	RNPS1	100	100.000	ENSPLAG00000009343	RNPS1	100	100.000	Poecilia_latipinna
ENSPREG00000001843	RNPS1	100	100.000	ENSPMEG00000008552	RNPS1	100	100.000	Poecilia_mexicana
ENSPREG00000001843	RNPS1	75	63.426	ENSPCOG00000005478	RNPS1	82	66.176	Propithecus_coquereli
ENSPREG00000001843	RNPS1	77	80.930	ENSPNYG00000000585	RNPS1	77	78.140	Pundamilia_nyererei
ENSPREG00000001843	RNPS1	77	77.064	ENSPNAG00000025479	RNPS1	77	69.725	Pygocentrus_nattereri
ENSPREG00000001843	RNPS1	75	63.889	ENSRROG00000041252	RNPS1	84	69.608	Rhinopithecus_roxellana
ENSPREG00000001843	RNPS1	75	63.889	ENSSBOG00000027927	RNPS1	79	66.502	Saimiri_boliviensis_boliviensis
ENSPREG00000001843	RNPS1	75	78.404	ENSSFOG00015019341	-	73	77.340	Scleropages_formosus
ENSPREG00000001843	RNPS1	78	78.378	ENSSFOG00015022746	RNPS1	80	73.636	Scleropages_formosus
ENSPREG00000001843	RNPS1	77	83.256	ENSSMAG00000016933	RNPS1	77	80.930	Scophthalmus_maximus
ENSPREG00000001843	RNPS1	77	81.019	ENSSDUG00000011453	RNPS1	77	83.796	Seriola_dumerili
ENSPREG00000001843	RNPS1	74	83.654	ENSSLDG00000021341	RNPS1	76	80.769	Seriola_lalandi_dorsalis
ENSPREG00000001843	RNPS1	77	78.241	ENSSPAG00000009383	RNPS1	77	81.019	Stegastes_partitus
ENSPREG00000001843	RNPS1	75	62.791	ENSTGUG00000003237	RNPS1	77	66.210	Taeniopygia_guttata
ENSPREG00000001843	RNPS1	76	75.000	ENSTRUG00000008602	RNPS1	77	77.523	Takifugu_rubripes
ENSPREG00000001843	RNPS1	76	75.814	ENSTNIG00000009753	RNPS1	76	78.341	Tetraodon_nigroviridis
ENSPREG00000001843	RNPS1	84	69.262	ENSXETG00000024439	rnps1	78	66.942	Xenopus_tropicalis
ENSPREG00000001843	RNPS1	100	99.286	ENSXMAG00000004827	RNPS1	100	99.286	Xiphophorus_maculatus