EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000001848 (Gene tree)
Gene ID: 103474685
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 18233 bases
Position: chrLG13:18553776-18572008
Accession: 103474685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002533	NMD3	PF04981.13	3.8e-82	1	1
ENSPREP00000002548	NMD3	PF04981.13	4.1e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002581	-	5944	XM_008425814	ENSPREP00000002533	504 (aa)	XP_008424036	UPI0004A4CC99
ENSPRET00000002596	-	5945	-	ENSPREP00000002548	517 (aa)	-	-

Gene Model

Click here to download ENSPREG00000001848's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001848	nmd3	99	76.984	ENSG00000169251	NMD3	100	79.358	Homo_sapiens
ENSPREG00000001848	nmd3	100	96.230	ENSAPOG00000022912	nmd3	100	96.230	Acanthochromis_polyacanthus
ENSPREG00000001848	nmd3	99	77.822	ENSAMEG00000001584	NMD3	99	77.822	Ailuropoda_melanoleuca
ENSPREG00000001848	nmd3	100	89.484	ENSACIG00000015196	nmd3	100	89.484	Amphilophus_citrinellus
ENSPREG00000001848	nmd3	100	96.429	ENSAOCG00000009086	nmd3	100	96.429	Amphiprion_ocellaris
ENSPREG00000001848	nmd3	100	96.429	ENSAPEG00000000329	nmd3	100	96.429	Amphiprion_percula
ENSPREG00000001848	nmd3	100	95.437	ENSATEG00000014351	nmd3	100	95.437	Anabas_testudineus
ENSPREG00000001848	nmd3	100	77.030	ENSAPLG00000014786	NMD3	100	77.030	Anas_platyrhynchos
ENSPREG00000001848	nmd3	100	80.198	ENSACAG00000007349	NMD3	100	80.198	Anolis_carolinensis
ENSPREG00000001848	nmd3	99	77.355	ENSANAG00000026434	NMD3	99	77.355	Aotus_nancymaae
ENSPREG00000001848	nmd3	100	95.040	ENSACLG00000015520	nmd3	100	95.040	Astatotilapia_calliptera
ENSPREG00000001848	nmd3	100	90.079	ENSAMXG00000014415	nmd3	100	90.079	Astyanax_mexicanus
ENSPREG00000001848	nmd3	99	76.984	ENSBTAG00000016228	NMD3	100	76.984	Bos_taurus
ENSPREG00000001848	nmd3	96	50.000	WBGene00012030	T25G3.3	96	50.000	Caenorhabditis_elegans
ENSPREG00000001848	nmd3	99	77.711	ENSCJAG00000002900	NMD3	97	77.711	Callithrix_jacchus
ENSPREG00000001848	nmd3	99	76.707	ENSCAFG00000014352	NMD3	97	76.707	Canis_familiaris
ENSPREG00000001848	nmd3	99	76.389	ENSCAFG00020021145	NMD3	99	76.389	Canis_lupus_dingo
ENSPREG00000001848	nmd3	99	77.183	ENSCHIG00000016015	NMD3	100	77.183	Capra_hircus
ENSPREG00000001848	nmd3	99	76.984	ENSTSYG00000002155	NMD3	99	76.984	Carlito_syrichta
ENSPREG00000001848	nmd3	79	75.750	ENSCAPG00000017861	NMD3	93	75.750	Cavia_aperea
ENSPREG00000001848	nmd3	87	76.430	ENSCPOG00000005953	NMD3	94	76.430	Cavia_porcellus
ENSPREG00000001848	nmd3	99	76.984	ENSCCAG00000037460	NMD3	100	76.984	Cebus_capucinus
ENSPREG00000001848	nmd3	99	77.579	ENSCATG00000030022	NMD3	100	77.579	Cercocebus_atys
ENSPREG00000001848	nmd3	99	77.579	ENSCLAG00000003155	NMD3	100	77.579	Chinchilla_lanigera
ENSPREG00000001848	nmd3	99	77.579	ENSCSAG00000012333	NMD3	100	77.579	Chlorocebus_sabaeus
ENSPREG00000001848	nmd3	80	75.704	ENSCHOG00000001240	NMD3	80	75.704	Choloepus_hoffmanni
ENSPREG00000001848	nmd3	99	81.944	ENSCPBG00000018318	NMD3	99	82.278	Chrysemys_picta_bellii
ENSPREG00000001848	nmd3	97	54.082	ENSCING00000002129	-	97	54.082	Ciona_intestinalis
ENSPREG00000001848	nmd3	87	54.318	ENSCSAVG00000001120	-	97	54.318	Ciona_savignyi
ENSPREG00000001848	nmd3	99	71.968	ENSCANG00000042939	NMD3	95	71.571	Colobus_angolensis_palliatus
ENSPREG00000001848	nmd3	91	67.896	ENSCGRG00001001792	Nmd3	97	67.896	Cricetulus_griseus_chok1gshd
ENSPREG00000001848	nmd3	97	77.189	ENSCGRG00000007947	Nmd3	98	77.505	Cricetulus_griseus_crigri
ENSPREG00000001848	nmd3	100	92.857	ENSCSEG00000017954	nmd3	100	92.857	Cynoglossus_semilaevis
ENSPREG00000001848	nmd3	100	86.706	ENSCVAG00000004672	nmd3	100	86.706	Cyprinodon_variegatus
ENSPREG00000001848	nmd3	100	86.733	ENSDARG00000015676	nmd3	100	86.733	Danio_rerio
ENSPREG00000001848	nmd3	99	75.992	ENSDNOG00000045222	NMD3	100	75.992	Dasypus_novemcinctus
ENSPREG00000001848	nmd3	97	70.143	ENSDORG00000005716	Nmd3	100	71.053	Dipodomys_ordii
ENSPREG00000001848	nmd3	98	55.289	FBgn0023542	Nmd3	96	55.090	Drosophila_melanogaster
ENSPREG00000001848	nmd3	99	67.460	ENSETEG00000003168	NMD3	99	67.460	Echinops_telfairi
ENSPREG00000001848	nmd3	89	59.911	ENSEBUG00000014316	nmd3	97	59.911	Eptatretus_burgeri
ENSPREG00000001848	nmd3	99	76.984	ENSEASG00005018672	NMD3	100	76.984	Equus_asinus_asinus
ENSPREG00000001848	nmd3	99	77.309	ENSECAG00000000188	NMD3	97	77.309	Equus_caballus
ENSPREG00000001848	nmd3	94	56.992	ENSEEUG00000010642	-	100	56.992	Erinaceus_europaeus
ENSPREG00000001848	nmd3	100	89.683	ENSELUG00000024123	nmd3	100	89.683	Esox_lucius
ENSPREG00000001848	nmd3	99	77.711	ENSFCAG00000022867	NMD3	99	77.579	Felis_catus
ENSPREG00000001848	nmd3	94	80.000	ENSFALG00000008711	NMD3	100	80.000	Ficedula_albicollis
ENSPREG00000001848	nmd3	97	65.314	ENSFDAG00000012197	-	98	65.503	Fukomys_damarensis
ENSPREG00000001848	nmd3	99	75.842	ENSFDAG00000013724	-	100	75.842	Fukomys_damarensis
ENSPREG00000001848	nmd3	100	95.635	ENSFHEG00000000415	nmd3	100	95.635	Fundulus_heteroclitus
ENSPREG00000001848	nmd3	97	87.526	ENSGMOG00000009675	nmd3	100	87.526	Gadus_morhua
ENSPREG00000001848	nmd3	100	78.812	ENSGALG00000009533	NMD3	100	78.812	Gallus_gallus
ENSPREG00000001848	nmd3	99	97.988	ENSGAFG00000012798	nmd3	94	97.988	Gambusia_affinis
ENSPREG00000001848	nmd3	100	91.468	ENSGACG00000010028	nmd3	100	91.468	Gasterosteus_aculeatus
ENSPREG00000001848	nmd3	99	81.548	ENSGAGG00000006556	NMD3	99	81.548	Gopherus_agassizii
ENSPREG00000001848	nmd3	99	77.381	ENSGGOG00000007157	NMD3	100	77.381	Gorilla_gorilla
ENSPREG00000001848	nmd3	99	62.624	ENSGGOG00000028590	-	99	62.624	Gorilla_gorilla
ENSPREG00000001848	nmd3	100	95.040	ENSHBUG00000001781	nmd3	100	95.040	Haplochromis_burtoni
ENSPREG00000001848	nmd3	99	76.984	ENSHGLG00000014451	-	100	76.984	Heterocephalus_glaber_female
ENSPREG00000001848	nmd3	99	62.500	ENSHGLG00000010477	-	100	62.500	Heterocephalus_glaber_female
ENSPREG00000001848	nmd3	99	76.984	ENSHGLG00100006613	-	100	76.984	Heterocephalus_glaber_male
ENSPREG00000001848	nmd3	99	62.698	ENSHGLG00100001042	-	100	62.698	Heterocephalus_glaber_male
ENSPREG00000001848	nmd3	99	90.837	ENSHCOG00000004292	nmd3	92	90.837	Hippocampus_comes
ENSPREG00000001848	nmd3	100	86.905	ENSIPUG00000005073	nmd3	100	86.905	Ictalurus_punctatus
ENSPREG00000001848	nmd3	99	77.778	ENSSTOG00000001899	NMD3	100	77.778	Ictidomys_tridecemlineatus
ENSPREG00000001848	nmd3	97	78.323	ENSJJAG00000019759	Nmd3	99	78.323	Jaculus_jaculus
ENSPREG00000001848	nmd3	100	95.040	ENSKMAG00000020427	nmd3	100	95.040	Kryptolebias_marmoratus
ENSPREG00000001848	nmd3	100	91.700	ENSLBEG00000022216	nmd3	100	91.700	Labrus_bergylta
ENSPREG00000001848	nmd3	99	77.956	ENSLACG00000005731	NMD3	99	81.693	Latimeria_chalumnae
ENSPREG00000001848	nmd3	100	87.525	ENSLOCG00000003561	nmd3	100	87.525	Lepisosteus_oculatus
ENSPREG00000001848	nmd3	99	74.851	ENSLAFG00000007231	NMD3	100	74.851	Loxodonta_africana
ENSPREG00000001848	nmd3	99	77.579	ENSMFAG00000040934	NMD3	100	77.579	Macaca_fascicularis
ENSPREG00000001848	nmd3	99	76.740	ENSMMUG00000009564	NMD3	99	76.603	Macaca_mulatta
ENSPREG00000001848	nmd3	99	77.579	ENSMNEG00000034626	NMD3	100	77.579	Macaca_nemestrina
ENSPREG00000001848	nmd3	88	78.153	ENSMLEG00000002741	NMD3	100	78.153	Mandrillus_leucophaeus
ENSPREG00000001848	nmd3	100	93.452	ENSMAMG00000012427	nmd3	100	93.452	Mastacembelus_armatus
ENSPREG00000001848	nmd3	100	95.040	ENSMZEG00005016888	nmd3	100	95.040	Maylandia_zebra
ENSPREG00000001848	nmd3	100	78.812	ENSMGAG00000010498	NMD3	100	78.812	Meleagris_gallopavo
ENSPREG00000001848	nmd3	99	76.389	ENSMAUG00000000633	Nmd3	100	76.389	Mesocricetus_auratus
ENSPREG00000001848	nmd3	99	76.984	ENSMICG00000049196	NMD3	100	76.984	Microcebus_murinus
ENSPREG00000001848	nmd3	99	76.143	ENSMOCG00000005180	Nmd3	100	76.143	Microtus_ochrogaster
ENSPREG00000001848	nmd3	100	92.475	ENSMMOG00000012765	nmd3	100	92.475	Mola_mola
ENSPREG00000001848	nmd3	99	63.320	ENSMODG00000016296	NMD3	100	62.692	Monodelphis_domestica
ENSPREG00000001848	nmd3	100	94.246	ENSMALG00000009256	nmd3	100	94.246	Monopterus_albus
ENSPREG00000001848	nmd3	99	76.587	MGP_CAROLIEiJ_G0025069	Nmd3	100	76.587	Mus_caroli
ENSPREG00000001848	nmd3	99	76.389	ENSMUSG00000027787	Nmd3	100	76.389	Mus_musculus
ENSPREG00000001848	nmd3	99	76.389	MGP_PahariEiJ_G0026512	Nmd3	100	76.389	Mus_pahari
ENSPREG00000001848	nmd3	99	76.587	MGP_SPRETEiJ_G0026011	Nmd3	100	76.587	Mus_spretus
ENSPREG00000001848	nmd3	99	77.579	ENSMPUG00000002955	NMD3	99	77.579	Mustela_putorius_furo
ENSPREG00000001848	nmd3	97	74.593	ENSMLUG00000000701	NMD3	97	74.593	Myotis_lucifugus
ENSPREG00000001848	nmd3	99	76.938	ENSNGAG00000012307	Nmd3	99	76.938	Nannospalax_galili
ENSPREG00000001848	nmd3	100	94.048	ENSNBRG00000003324	nmd3	100	94.048	Neolamprologus_brichardi
ENSPREG00000001848	nmd3	99	77.183	ENSNLEG00000004655	NMD3	100	77.183	Nomascus_leucogenys
ENSPREG00000001848	nmd3	73	69.298	ENSOPRG00000007690	-	73	69.298	Ochotona_princeps
ENSPREG00000001848	nmd3	99	77.381	ENSODEG00000006270	NMD3	100	77.381	Octodon_degus
ENSPREG00000001848	nmd3	100	94.841	ENSONIG00000003643	nmd3	100	94.841	Oreochromis_niloticus
ENSPREG00000001848	nmd3	99	76.447	ENSOCUG00000017454	NMD3	100	76.447	Oryctolagus_cuniculus
ENSPREG00000001848	nmd3	100	93.254	ENSORLG00000006279	nmd3	100	93.254	Oryzias_latipes
ENSPREG00000001848	nmd3	100	93.056	ENSORLG00020003843	nmd3	100	93.056	Oryzias_latipes_hni
ENSPREG00000001848	nmd3	100	92.659	ENSORLG00015006379	nmd3	100	92.659	Oryzias_latipes_hsok
ENSPREG00000001848	nmd3	100	94.246	ENSOMEG00000012144	nmd3	100	94.246	Oryzias_melastigma
ENSPREG00000001848	nmd3	99	77.381	ENSOGAG00000014910	NMD3	100	77.381	Otolemur_garnettii
ENSPREG00000001848	nmd3	99	77.400	ENSOARG00000001883	NMD3	97	77.400	Ovis_aries
ENSPREG00000001848	nmd3	99	76.984	ENSPPAG00000043829	NMD3	100	76.984	Pan_paniscus
ENSPREG00000001848	nmd3	99	77.956	ENSPPRG00000000724	NMD3	97	77.956	Panthera_pardus
ENSPREG00000001848	nmd3	99	77.381	ENSPTIG00000016761	NMD3	99	77.381	Panthera_tigris_altaica
ENSPREG00000001848	nmd3	99	76.984	ENSPTRG00000015586	NMD3	100	76.984	Pan_troglodytes
ENSPREG00000001848	nmd3	99	76.740	ENSPANG00000006665	NMD3	95	76.740	Papio_anubis
ENSPREG00000001848	nmd3	100	87.500	ENSPKIG00000009928	nmd3	100	87.500	Paramormyrops_kingsleyae
ENSPREG00000001848	nmd3	100	81.386	ENSPSIG00000007591	NMD3	100	81.386	Pelodiscus_sinensis
ENSPREG00000001848	nmd3	100	88.690	ENSPMGG00000014015	nmd3	100	88.690	Periophthalmus_magnuspinnatus
ENSPREG00000001848	nmd3	99	76.786	ENSPEMG00000021880	Nmd3	100	76.786	Peromyscus_maniculatus_bairdii
ENSPREG00000001848	nmd3	99	79.960	ENSPCIG00000020869	NMD3	100	79.960	Phascolarctos_cinereus
ENSPREG00000001848	nmd3	100	99.405	ENSPFOG00000012103	nmd3	100	99.405	Poecilia_formosa
ENSPREG00000001848	nmd3	100	99.603	ENSPLAG00000008087	nmd3	100	99.603	Poecilia_latipinna
ENSPREG00000001848	nmd3	100	99.405	ENSPMEG00000008506	nmd3	100	99.405	Poecilia_mexicana
ENSPREG00000001848	nmd3	99	77.183	ENSPPYG00000014263	NMD3	100	77.183	Pongo_abelii
ENSPREG00000001848	nmd3	91	63.696	ENSPCAG00000009851	NMD3	100	63.696	Procavia_capensis
ENSPREG00000001848	nmd3	85	73.950	ENSPVAG00000003301	NMD3	82	77.885	Pteropus_vampyrus
ENSPREG00000001848	nmd3	100	95.238	ENSPNYG00000006778	nmd3	100	95.238	Pundamilia_nyererei
ENSPREG00000001848	nmd3	100	88.889	ENSPNAG00000009442	nmd3	100	88.889	Pygocentrus_nattereri
ENSPREG00000001848	nmd3	99	75.992	ENSRNOG00000009310	Nmd3	100	75.992	Rattus_norvegicus
ENSPREG00000001848	nmd3	99	73.214	ENSRBIG00000040379	NMD3	100	73.214	Rhinopithecus_bieti
ENSPREG00000001848	nmd3	99	76.984	ENSRROG00000036181	NMD3	100	76.984	Rhinopithecus_roxellana
ENSPREG00000001848	nmd3	94	44.064	YHR170W	NMD3	94	44.266	Saccharomyces_cerevisiae
ENSPREG00000001848	nmd3	99	76.400	ENSSBOG00000024021	NMD3	99	76.400	Saimiri_boliviensis_boliviensis
ENSPREG00000001848	nmd3	99	74.603	ENSSHAG00000016044	NMD3	100	74.603	Sarcophilus_harrisii
ENSPREG00000001848	nmd3	100	89.286	ENSSFOG00015003609	nmd3	100	89.286	Scleropages_formosus
ENSPREG00000001848	nmd3	100	92.262	ENSSMAG00000012887	nmd3	100	92.262	Scophthalmus_maximus
ENSPREG00000001848	nmd3	100	95.238	ENSSDUG00000023721	nmd3	100	95.238	Seriola_dumerili
ENSPREG00000001848	nmd3	100	94.643	ENSSLDG00000006565	nmd3	100	94.643	Seriola_lalandi_dorsalis
ENSPREG00000001848	nmd3	97	77.914	ENSSARG00000010402	NMD3	99	77.914	Sorex_araneus
ENSPREG00000001848	nmd3	99	80.000	ENSSPUG00000018791	NMD3	100	80.000	Sphenodon_punctatus
ENSPREG00000001848	nmd3	100	95.635	ENSSPAG00000014328	nmd3	100	95.635	Stegastes_partitus
ENSPREG00000001848	nmd3	99	76.707	ENSSSCG00000022952	NMD3	100	76.587	Sus_scrofa
ENSPREG00000001848	nmd3	91	78.308	ENSTGUG00000015141	-	100	78.308	Taeniopygia_guttata
ENSPREG00000001848	nmd3	99	79.960	ENSTGUG00000011140	-	100	79.960	Taeniopygia_guttata
ENSPREG00000001848	nmd3	100	92.857	ENSTRUG00000005958	nmd3	100	92.857	Takifugu_rubripes
ENSPREG00000001848	nmd3	99	55.952	ENSTBEG00000011783	-	100	55.952	Tupaia_belangeri
ENSPREG00000001848	nmd3	99	72.421	ENSTTRG00000012938	NMD3	100	72.421	Tursiops_truncatus
ENSPREG00000001848	nmd3	82	76.642	ENSUAMG00000009305	-	99	77.861	Ursus_americanus
ENSPREG00000001848	nmd3	99	77.956	ENSUMAG00000011070	NMD3	99	77.912	Ursus_maritimus
ENSPREG00000001848	nmd3	99	76.190	ENSVPAG00000008779	NMD3	100	76.190	Vicugna_pacos
ENSPREG00000001848	nmd3	99	76.908	ENSVVUG00000023055	NMD3	99	76.908	Vulpes_vulpes
ENSPREG00000001848	nmd3	100	81.188	ENSXETG00000027727	nmd3	100	81.188	Xenopus_tropicalis
ENSPREG00000001848	nmd3	71	99.034	ENSXCOG00000012490	nmd3	85	99.065	Xiphophorus_couchianus
ENSPREG00000001848	nmd3	100	99.008	ENSXMAG00000018406	nmd3	100	99.008	Xiphophorus_maculatus