EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001918 (Gene tree)
Gene ID: 103471319
Gene Symbol: bicc2
Alias: bicc1a
Full Name: protein bicaudal C homolog 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 13345 bases
Position: chrLG10:25006213-25019557
Accession: 103471319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002635	KH_1	PF00013.29	4.6e-23	1	2
ENSPREP00000002635	KH_1	PF00013.29	4.6e-23	2	2
ENSPREP00000002619	KH_1	PF00013.29	5.1e-23	1	2
ENSPREP00000002619	KH_1	PF00013.29	5.1e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002667	-	2822	XM_008420228	ENSPREP00000002619	916 (aa)	XP_008418450	UPI0004A47A6A
ENSPRET00000002683	-	3071	-	ENSPREP00000002635	895 (aa)	-	UPI0004A4A584

Gene Model

Click here to download ENSPREG00000001918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001918	bicc2	73	55.440	ENSPREG00000010793	bicc1a	68	55.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001918	bicc2	99	77.594	ENSAPOG00000019115	bicc2	99	77.925	Acanthochromis_polyacanthus
ENSPREG00000001918	bicc2	86	82.178	ENSAOCG00000021728	bicc2	96	72.222	Amphiprion_ocellaris
ENSPREG00000001918	bicc2	92	81.188	ENSAPEG00000015354	bicc2	99	69.956	Amphiprion_percula
ENSPREG00000001918	bicc2	70	82.609	ENSATEG00000009479	bicc2	92	81.018	Anabas_testudineus
ENSPREG00000001918	bicc2	91	78.182	ENSACLG00000010291	bicc2	100	78.303	Astatotilapia_calliptera
ENSPREG00000001918	bicc2	93	60.279	ENSAMXG00000017167	bicc2	81	74.528	Astyanax_mexicanus
ENSPREG00000001918	bicc2	99	70.423	ENSCSEG00000006475	bicc2	99	70.098	Cynoglossus_semilaevis
ENSPREG00000001918	bicc2	100	82.011	ENSCVAG00000011501	bicc2	100	81.899	Cyprinodon_variegatus
ENSPREG00000001918	bicc2	93	58.517	ENSDARG00000076557	bicc2	96	58.257	Danio_rerio
ENSPREG00000001918	bicc2	93	63.977	ENSELUG00000018740	bicc2	90	63.977	Esox_lucius
ENSPREG00000001918	bicc2	80	85.294	ENSFHEG00000022640	bicc2	98	63.813	Fundulus_heteroclitus
ENSPREG00000001918	bicc2	93	60.808	ENSGMOG00000009682	bicc2	94	60.689	Gadus_morhua
ENSPREG00000001918	bicc2	97	87.543	ENSGAFG00000009167	bicc2	99	87.543	Gambusia_affinis
ENSPREG00000001918	bicc2	95	70.956	ENSGACG00000017939	bicc2	95	70.956	Gasterosteus_aculeatus
ENSPREG00000001918	bicc2	99	75.358	ENSHBUG00000009003	bicc2	99	76.018	Haplochromis_burtoni
ENSPREG00000001918	bicc2	77	90.196	ENSHCOG00000014603	bicc2	89	90.196	Hippocampus_comes
ENSPREG00000001918	bicc2	93	59.469	ENSIPUG00000008968	bicc2	92	59.217	Ictalurus_punctatus
ENSPREG00000001918	bicc2	70	79.014	ENSKMAG00000009505	bicc2	91	79.491	Kryptolebias_marmoratus
ENSPREG00000001918	bicc2	88	81.203	ENSLBEG00000001155	bicc2	95	81.203	Labrus_bergylta
ENSPREG00000001918	bicc2	59	63.736	ENSLACG00000013687	-	67	63.736	Latimeria_chalumnae
ENSPREG00000001918	bicc2	93	57.497	ENSLOCG00000011365	bicc2	94	57.497	Lepisosteus_oculatus
ENSPREG00000001918	bicc2	87	76.836	ENSMAMG00000006344	bicc2	92	77.024	Mastacembelus_armatus
ENSPREG00000001918	bicc2	74	74.257	ENSMZEG00005000357	bicc2	97	73.043	Maylandia_zebra
ENSPREG00000001918	bicc2	76	81.671	ENSMMOG00000002840	bicc2	94	80.449	Mola_mola
ENSPREG00000001918	bicc2	99	70.621	ENSMALG00000011735	bicc2	99	70.732	Monopterus_albus
ENSPREG00000001918	bicc2	94	76.294	ENSONIG00000004936	bicc2	99	77.859	Oreochromis_niloticus
ENSPREG00000001918	bicc2	99	72.284	ENSORLG00000004346	bicc2	99	72.616	Oryzias_latipes
ENSPREG00000001918	bicc2	96	64.624	ENSORLG00020014233	bicc2	95	65.643	Oryzias_latipes_hni
ENSPREG00000001918	bicc2	99	73.009	ENSORLG00015021684	bicc2	99	73.009	Oryzias_latipes_hsok
ENSPREG00000001918	bicc2	99	72.000	ENSOMEG00000004070	bicc2	99	71.920	Oryzias_melastigma
ENSPREG00000001918	bicc2	94	57.944	ENSPKIG00000015555	bicc2	93	57.593	Paramormyrops_kingsleyae
ENSPREG00000001918	bicc2	86	73.228	ENSPMGG00000021752	bicc2	87	77.570	Periophthalmus_magnuspinnatus
ENSPREG00000001918	bicc2	98	84.667	ENSPFOG00000000640	bicc2	100	84.667	Poecilia_formosa
ENSPREG00000001918	bicc2	86	97.500	ENSPLAG00000011230	bicc2	99	97.500	Poecilia_latipinna
ENSPREG00000001918	bicc2	77	97.500	ENSPMEG00000003438	bicc2	99	97.059	Poecilia_mexicana
ENSPREG00000001918	bicc2	74	74.257	ENSPNYG00000001673	bicc2	97	73.043	Pundamilia_nyererei
ENSPREG00000001918	bicc2	69	72.840	ENSPNAG00000011311	bicc2	89	67.241	Pygocentrus_nattereri
ENSPREG00000001918	bicc2	83	64.097	ENSSFOG00015003080	bicc2	82	66.667	Scleropages_formosus
ENSPREG00000001918	bicc2	99	72.757	ENSSMAG00000001751	bicc2	98	72.425	Scophthalmus_maximus
ENSPREG00000001918	bicc2	86	84.158	ENSSDUG00000002631	bicc2	95	72.170	Seriola_dumerili
ENSPREG00000001918	bicc2	99	76.881	ENSSLDG00000001984	bicc2	99	76.509	Seriola_lalandi_dorsalis
ENSPREG00000001918	bicc2	93	82.727	ENSSPAG00000016923	bicc2	99	67.517	Stegastes_partitus
ENSPREG00000001918	bicc2	86	70.301	ENSTRUG00000010821	bicc2	99	61.385	Takifugu_rubripes
ENSPREG00000001918	bicc2	98	67.637	ENSTNIG00000014205	bicc2	95	69.565	Tetraodon_nigroviridis
ENSPREG00000001918	bicc2	59	97.338	ENSXCOG00000002192	bicc2	99	97.338	Xiphophorus_couchianus
ENSPREG00000001918	bicc2	100	96.094	ENSXMAG00000013618	bicc2	100	96.094	Xiphophorus_maculatus