EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5099 bases
Position: chrLG19:10163450-10168548
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002773	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002823	-	408	-	ENSPREP00000002773	135 (aa)	-	-

Gene Model

Click here to download ENSPREG00000002020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002020	-	74	37.736	ENSPREG00000001895	-	51	37.736
ENSPREG00000002020	-	66	38.202	ENSPREG00000008262	arl8	50	38.202
ENSPREG00000002020	-	77	35.849	ENSPREG00000013042	-	54	35.849
ENSPREG00000002020	-	73	34.343	ENSPREG00000013361	arl1	53	34.343
ENSPREG00000002020	-	73	37.374	ENSPREG00000009009	-	55	37.374
ENSPREG00000002020	-	87	81.356	ENSPREG00000016098	sar1ab	60	81.356
ENSPREG00000002020	-	65	35.789	ENSPREG00000010815	arl11	56	35.789
ENSPREG00000002020	-	66	35.955	ENSPREG00000000912	-	52	35.955
ENSPREG00000002020	-	68	34.783	ENSPREG00000008730	arl5c	51	34.783
ENSPREG00000002020	-	79	35.514	ENSPREG00000003600	arl3l2	57	35.514
ENSPREG00000002020	-	70	32.632	ENSPREG00000004191	arl8ba	51	32.632
ENSPREG00000002020	-	87	84.746	ENSPREG00000005312	sar1b	54	84.746
ENSPREG00000002020	-	73	37.255	ENSPREG00000007723	-	57	37.255
ENSPREG00000002020	-	74	30.693	ENSPREG00000014738	-	57	31.193
ENSPREG00000002020	-	69	35.484	ENSPREG00000012688	arf3b	51	35.484
ENSPREG00000002020	-	70	32.632	ENSPREG00000021315	arl8bb	51	32.632
ENSPREG00000002020	-	70	32.632	ENSPREG00000004992	arl8a	51	32.632
ENSPREG00000002020	-	80	37.719	ENSPREG00000021699	-	56	37.719
ENSPREG00000002020	-	68	39.175	ENSPREG00000015645	arl4cb	50	39.175
ENSPREG00000002020	-	69	35.484	ENSPREG00000020988	-	51	35.484
ENSPREG00000002020	-	80	33.333	ENSPREG00000020490	arl2	59	33.333
ENSPREG00000002020	-	77	34.906	ENSPREG00000021943	ARL6	57	34.906
ENSPREG00000002020	-	73	36.364	ENSPREG00000008632	arf2b	55	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002020	-	87	86.441	ENSAPOG00000007186	sar1b	60	86.441	Acanthochromis_polyacanthus
ENSPREG00000002020	-	95	88.462	ENSAPOG00000017891	-	100	88.462	Acanthochromis_polyacanthus
ENSPREG00000002020	-	87	85.593	ENSACIG00000013634	sar1b	60	85.593	Amphilophus_citrinellus
ENSPREG00000002020	-	87	92.373	ENSACIG00000024513	-	60	92.373	Amphilophus_citrinellus
ENSPREG00000002020	-	95	88.462	ENSAOCG00000002627	-	100	88.462	Amphiprion_ocellaris
ENSPREG00000002020	-	87	85.593	ENSAOCG00000005888	sar1b	60	85.593	Amphiprion_ocellaris
ENSPREG00000002020	-	87	85.593	ENSAPEG00000022771	sar1b	60	85.593	Amphiprion_percula
ENSPREG00000002020	-	94	88.976	ENSAPEG00000019680	-	94	88.976	Amphiprion_percula
ENSPREG00000002020	-	87	92.373	ENSATEG00000023368	-	60	92.373	Anabas_testudineus
ENSPREG00000002020	-	87	86.441	ENSATEG00000012904	sar1b	60	86.441	Anabas_testudineus
ENSPREG00000002020	-	87	85.593	ENSACAG00000001470	-	60	85.593	Anolis_carolinensis
ENSPREG00000002020	-	87	84.746	ENSACLG00000014649	sar1b	60	84.746	Astatotilapia_calliptera
ENSPREG00000002020	-	87	91.525	ENSACLG00000005011	-	60	91.525	Astatotilapia_calliptera
ENSPREG00000002020	-	90	88.525	ENSAMXG00000018108	sar1b	88	88.525	Astyanax_mexicanus
ENSPREG00000002020	-	87	91.525	ENSAMXG00000034192	-	80	92.982	Astyanax_mexicanus
ENSPREG00000002020	-	87	91.525	ENSCSEG00000016976	-	60	91.525	Cynoglossus_semilaevis
ENSPREG00000002020	-	76	87.255	ENSCSEG00000015238	sar1b	50	87.255	Cynoglossus_semilaevis
ENSPREG00000002020	-	87	88.983	ENSCVAG00000022959	sar1b	60	88.983	Cyprinodon_variegatus
ENSPREG00000002020	-	87	88.983	ENSDARG00000103403	sar1b	60	88.983	Danio_rerio
ENSPREG00000002020	-	86	70.690	FBgn0038947	Sar1	58	70.690	Drosophila_melanogaster
ENSPREG00000002020	-	83	80.357	ENSEBUG00000011723	sar1b	57	80.357	Eptatretus_burgeri
ENSPREG00000002020	-	87	89.831	ENSELUG00000020912	sar1b	60	89.831	Esox_lucius
ENSPREG00000002020	-	87	88.983	ENSFHEG00000019865	sar1b	60	88.983	Fundulus_heteroclitus
ENSPREG00000002020	-	87	88.136	ENSGMOG00000008023	sar1b	60	88.136	Gadus_morhua
ENSPREG00000002020	-	87	85.593	ENSGAFG00000007081	sar1b	60	85.593	Gambusia_affinis
ENSPREG00000002020	-	87	84.746	ENSGACG00000001474	sar1b	60	84.746	Gasterosteus_aculeatus
ENSPREG00000002020	-	87	84.746	ENSHBUG00000000915	sar1b	60	84.746	Haplochromis_burtoni
ENSPREG00000002020	-	87	91.525	ENSHBUG00000018397	-	64	91.525	Haplochromis_burtoni
ENSPREG00000002020	-	86	87.931	ENSHCOG00000010953	sar1b	59	87.931	Hippocampus_comes
ENSPREG00000002020	-	87	87.288	ENSIPUG00000020925	sar1b	60	87.288	Ictalurus_punctatus
ENSPREG00000002020	-	95	80.303	ENSIPUG00000010046	sar1b	94	80.303	Ictalurus_punctatus
ENSPREG00000002020	-	87	87.288	ENSKMAG00000019693	sar1b	60	87.288	Kryptolebias_marmoratus
ENSPREG00000002020	-	86	93.966	ENSKMAG00000014875	-	89	93.966	Kryptolebias_marmoratus
ENSPREG00000002020	-	87	83.898	ENSLBEG00000027550	sar1b	60	83.898	Labrus_bergylta
ENSPREG00000002020	-	87	90.678	ENSLBEG00000016945	-	60	90.678	Labrus_bergylta
ENSPREG00000002020	-	87	80.508	ENSLACG00000010795	sar1b	60	80.508	Latimeria_chalumnae
ENSPREG00000002020	-	79	63.717	ENSLACG00000017029	-	57	63.717	Latimeria_chalumnae
ENSPREG00000002020	-	87	88.136	ENSLOCG00000005214	-	60	88.136	Lepisosteus_oculatus
ENSPREG00000002020	-	87	88.136	ENSLOCG00000010197	sar1b	60	88.136	Lepisosteus_oculatus
ENSPREG00000002020	-	87	83.898	ENSMAMG00000021732	sar1b	60	83.898	Mastacembelus_armatus
ENSPREG00000002020	-	87	84.746	ENSMZEG00005008942	sar1b	60	84.746	Maylandia_zebra
ENSPREG00000002020	-	87	91.525	ENSMZEG00005001012	-	60	91.525	Maylandia_zebra
ENSPREG00000002020	-	73	87.879	ENSMGAG00000005387	-	51	87.879	Meleagris_gallopavo
ENSPREG00000002020	-	87	89.831	ENSMMOG00000013803	-	60	89.831	Mola_mola
ENSPREG00000002020	-	87	85.593	ENSMALG00000016635	sar1b	55	85.593	Monopterus_albus
ENSPREG00000002020	-	87	84.746	ENSNBRG00000008013	sar1b	60	84.746	Neolamprologus_brichardi
ENSPREG00000002020	-	87	91.525	ENSNBRG00000014004	-	60	91.525	Neolamprologus_brichardi
ENSPREG00000002020	-	87	85.593	ENSONIG00000017278	sar1b	60	85.593	Oreochromis_niloticus
ENSPREG00000002020	-	87	88.136	ENSORLG00000000932	sar1b	60	88.136	Oryzias_latipes
ENSPREG00000002020	-	87	88.136	ENSORLG00020021985	sar1b	60	88.136	Oryzias_latipes_hni
ENSPREG00000002020	-	87	88.136	ENSORLG00015007044	sar1b	60	88.136	Oryzias_latipes_hsok
ENSPREG00000002020	-	87	87.288	ENSOMEG00000001052	sar1b	84	76.744	Oryzias_melastigma
ENSPREG00000002020	-	87	87.288	ENSPKIG00000010688	sar1b	60	87.288	Paramormyrops_kingsleyae
ENSPREG00000002020	-	93	84.127	ENSPKIG00000017353	-	98	84.127	Paramormyrops_kingsleyae
ENSPREG00000002020	-	88	85.714	ENSPMGG00000001234	sar1b	93	85.714	Periophthalmus_magnuspinnatus
ENSPREG00000002020	-	87	77.686	ENSPMAG00000003593	sar1b	60	77.686	Petromyzon_marinus
ENSPREG00000002020	-	87	84.746	ENSPFOG00000005666	sar1b	60	84.746	Poecilia_formosa
ENSPREG00000002020	-	87	87.179	ENSPLAG00000012223	sar1b	84	87.179	Poecilia_latipinna
ENSPREG00000002020	-	87	100.000	ENSPLAG00000001016	-	86	89.630	Poecilia_latipinna
ENSPREG00000002020	-	87	84.746	ENSPMEG00000016831	sar1b	95	80.488	Poecilia_mexicana
ENSPREG00000002020	-	87	90.678	ENSPNYG00000021357	-	60	90.678	Pundamilia_nyererei
ENSPREG00000002020	-	87	84.746	ENSPNYG00000012440	sar1b	60	84.746	Pundamilia_nyererei
ENSPREG00000002020	-	87	88.983	ENSPNAG00000014683	sar1b	60	88.983	Pygocentrus_nattereri
ENSPREG00000002020	-	87	90.678	ENSPNAG00000001123	-	60	90.678	Pygocentrus_nattereri
ENSPREG00000002020	-	87	88.983	ENSSFOG00015018128	-	60	88.983	Scleropages_formosus
ENSPREG00000002020	-	87	90.598	ENSSFOG00015020051	sar1b	81	90.598	Scleropages_formosus
ENSPREG00000002020	-	87	91.525	ENSSMAG00000002165	-	60	91.525	Scophthalmus_maximus
ENSPREG00000002020	-	93	84.127	ENSSDUG00000020926	sar1b	97	84.127	Seriola_dumerili
ENSPREG00000002020	-	94	88.189	ENSSDUG00000019629	-	96	88.189	Seriola_dumerili
ENSPREG00000002020	-	87	87.288	ENSSLDG00000017052	sar1b	94	89.815	Seriola_lalandi_dorsalis
ENSPREG00000002020	-	87	92.373	ENSSLDG00000024197	-	60	92.373	Seriola_lalandi_dorsalis
ENSPREG00000002020	-	87	84.746	ENSSPUG00000010247	-	60	84.746	Sphenodon_punctatus
ENSPREG00000002020	-	87	88.136	ENSSPAG00000017634	sar1b	60	88.136	Stegastes_partitus
ENSPREG00000002020	-	87	92.373	ENSSPAG00000015626	-	60	92.373	Stegastes_partitus
ENSPREG00000002020	-	87	83.898	ENSTRUG00000023908	sar1b	60	83.898	Takifugu_rubripes
ENSPREG00000002020	-	87	82.203	ENSTNIG00000016097	sar1b	60	82.203	Tetraodon_nigroviridis
ENSPREG00000002020	-	87	75.214	ENSXCOG00000004160	sar1b	56	75.214	Xiphophorus_couchianus
ENSPREG00000002020	-	93	85.507	ENSXCOG00000006154	-	93	85.507	Xiphophorus_couchianus
ENSPREG00000002020	-	87	85.593	ENSXMAG00000008294	sar1b	86	85.965	Xiphophorus_maculatus