EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002093 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1530 bases
Position: chrLG18:3290949-3292478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002908	RRM_5	PF13893.6	2.6e-07	1	2
ENSPREP00000002908	RRM_5	PF13893.6	2.6e-07	2	2
ENSPREP00000002908	RRM_1	PF00076.22	3.2e-27	1	2
ENSPREP00000002908	RRM_1	PF00076.22	3.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002960	-	1041	-	ENSPREP00000002908	346 (aa)	-	-

Gene Model

Click here to download ENSPREG00000002093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002093	-	91	53.595	ENSPREG00000003724	rbm4.1	64	53.741
ENSPREG00000002093	-	97	37.176	ENSPREG00000003764	-	74	38.931
ENSPREG00000002093	-	99	63.506	ENSPREG00000002156	rbm4.3	99	61.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002093	-	100	75.429	ENSAPOG00000002991	rbm4.3	100	75.714	Acanthochromis_polyacanthus
ENSPREG00000002093	-	99	65.537	ENSAPOG00000002953	rbm4.3	99	66.106	Acanthochromis_polyacanthus
ENSPREG00000002093	-	99	62.108	ENSACIG00000021311	-	99	62.535	Amphilophus_citrinellus
ENSPREG00000002093	-	100	79.083	ENSACIG00000021295	rbm4.3	100	78.223	Amphilophus_citrinellus
ENSPREG00000002093	-	100	76.504	ENSAOCG00000007992	rbm4.3	100	75.645	Amphiprion_ocellaris
ENSPREG00000002093	-	99	65.812	ENSAOCG00000008015	rbm4.3	99	66.197	Amphiprion_ocellaris
ENSPREG00000002093	-	99	66.952	ENSAPEG00000017324	rbm4.3	99	66.384	Amphiprion_percula
ENSPREG00000002093	-	100	76.218	ENSAPEG00000017288	rbm4.3	100	75.645	Amphiprion_percula
ENSPREG00000002093	-	100	75.143	ENSATEG00000019395	rbm4.3	100	76.286	Anabas_testudineus
ENSPREG00000002093	-	99	65.043	ENSATEG00000019375	rbm4.3	99	65.254	Anabas_testudineus
ENSPREG00000002093	-	100	80.398	ENSACLG00000010642	rbm4.3	100	79.830	Astatotilapia_calliptera
ENSPREG00000002093	-	99	62.393	ENSACLG00000010620	-	99	62.817	Astatotilapia_calliptera
ENSPREG00000002093	-	52	70.166	ENSAMXG00000040224	rbm4.3	73	69.061	Astyanax_mexicanus
ENSPREG00000002093	-	99	60.845	ENSCSEG00000013659	rbm4.3	99	63.352	Cynoglossus_semilaevis
ENSPREG00000002093	-	100	84.971	ENSCVAG00000008502	rbm4.3	100	86.127	Cyprinodon_variegatus
ENSPREG00000002093	-	99	64.205	ENSCVAG00000008508	rbm4.3	99	63.352	Cyprinodon_variegatus
ENSPREG00000002093	-	95	63.343	ENSDARG00000022129	rbm4.3	99	64.225	Danio_rerio
ENSPREG00000002093	-	99	65.909	ENSELUG00000022150	rbm4.3	99	64.103	Esox_lucius
ENSPREG00000002093	-	99	65.730	ENSELUG00000022155	rbm4.3	99	66.384	Esox_lucius
ENSPREG00000002093	-	99	65.341	ENSELUG00000022168	rbm4.3	99	66.006	Esox_lucius
ENSPREG00000002093	-	80	67.143	ENSFHEG00000023137	rbm4.3	87	67.143	Fundulus_heteroclitus
ENSPREG00000002093	-	100	77.493	ENSFHEG00000023096	rbm4.3	100	80.398	Fundulus_heteroclitus
ENSPREG00000002093	-	55	73.438	ENSGMOG00000004032	rbm4.3	62	70.776	Gadus_morhua
ENSPREG00000002093	-	99	89.306	ENSGAFG00000001935	rbm4.3	99	87.861	Gambusia_affinis
ENSPREG00000002093	-	99	75.446	ENSGACG00000019980	rbm4.3	100	69.944	Gasterosteus_aculeatus
ENSPREG00000002093	-	100	80.114	ENSHBUG00000009051	rbm4.3	100	79.545	Haplochromis_burtoni
ENSPREG00000002093	-	99	62.393	ENSHBUG00000009020	-	99	62.817	Haplochromis_burtoni
ENSPREG00000002093	-	100	63.944	ENSHCOG00000010363	rbm4.3	99	65.738	Hippocampus_comes
ENSPREG00000002093	-	95	59.281	ENSHCOG00000010349	rbm4.3	99	59.831	Hippocampus_comes
ENSPREG00000002093	-	97	61.628	ENSIPUG00000022943	RBM4B	98	62.644	Ictalurus_punctatus
ENSPREG00000002093	-	99	59.207	ENSKMAG00000017468	rbm4.3	99	60.563	Kryptolebias_marmoratus
ENSPREG00000002093	-	100	75.284	ENSKMAG00000014541	rbm4.3	100	75.852	Kryptolebias_marmoratus
ENSPREG00000002093	-	55	78.947	ENSLBEG00000001025	rbm4.3	86	77.895	Labrus_bergylta
ENSPREG00000002093	-	99	64.387	ENSLBEG00000001071	-	99	64.225	Labrus_bergylta
ENSPREG00000002093	-	95	55.068	ENSLOCG00000002755	rbm4.3	99	56.430	Lepisosteus_oculatus
ENSPREG00000002093	-	100	75.645	ENSMAMG00000004701	rbm4.3	100	75.645	Mastacembelus_armatus
ENSPREG00000002093	-	99	66.000	ENSMAMG00000004715	-	83	65.537	Mastacembelus_armatus
ENSPREG00000002093	-	85	56.667	ENSMZEG00005028537	-	81	58.804	Maylandia_zebra
ENSPREG00000002093	-	99	59.259	ENSMZEG00005007417	-	99	59.718	Maylandia_zebra
ENSPREG00000002093	-	100	80.398	ENSMZEG00005028540	rbm4.3	100	79.830	Maylandia_zebra
ENSPREG00000002093	-	85	81.481	ENSMZEG00005007441	rbm4.3	78	80.412	Maylandia_zebra
ENSPREG00000002093	-	100	72.881	ENSMMOG00000012191	rbm4.3	100	72.805	Mola_mola
ENSPREG00000002093	-	91	73.016	ENSMALG00000003032	rbm4.3	95	73.968	Monopterus_albus
ENSPREG00000002093	-	85	63.880	ENSMALG00000003001	rbm4.3	86	64.214	Monopterus_albus
ENSPREG00000002093	-	100	72.779	ENSMALG00000015014	-	100	73.066	Monopterus_albus
ENSPREG00000002093	-	100	79.772	ENSNBRG00000012372	rbm4.3	100	78.632	Neolamprologus_brichardi
ENSPREG00000002093	-	99	62.393	ENSONIG00000018380	-	99	62.817	Oreochromis_niloticus
ENSPREG00000002093	-	100	78.814	ENSONIG00000018378	rbm4.3	100	77.684	Oreochromis_niloticus
ENSPREG00000002093	-	100	68.661	ENSORLG00000024749	rbm4.3	100	68.661	Oryzias_latipes
ENSPREG00000002093	-	97	57.714	ENSORLG00000011589	rbm4.3	99	59.615	Oryzias_latipes
ENSPREG00000002093	-	97	58.213	ENSORLG00000012473	rbm4.3	99	57.967	Oryzias_latipes
ENSPREG00000002093	-	100	68.966	ENSORLG00020012482	rbm4.3	100	68.966	Oryzias_latipes_hni
ENSPREG00000002093	-	97	57.429	ENSORLG00020012474	rbm4.3	99	59.341	Oryzias_latipes_hni
ENSPREG00000002093	-	97	58.213	ENSORLG00020012464	rbm4.3	99	57.967	Oryzias_latipes_hni
ENSPREG00000002093	-	100	68.768	ENSORLG00015013721	rbm4.3	100	68.768	Oryzias_latipes_hsok
ENSPREG00000002093	-	97	58.501	ENSORLG00015013686	rbm4.3	99	58.242	Oryzias_latipes_hsok
ENSPREG00000002093	-	97	56.571	ENSORLG00015013698	rbm4.3	99	59.890	Oryzias_latipes_hsok
ENSPREG00000002093	-	99	59.384	ENSOMEG00000005929	rbm4.3	99	59.066	Oryzias_melastigma
ENSPREG00000002093	-	99	59.944	ENSOMEG00000005918	rbm4.3	99	60.882	Oryzias_melastigma
ENSPREG00000002093	-	100	71.347	ENSOMEG00000005950	rbm4.3	100	71.633	Oryzias_melastigma
ENSPREG00000002093	-	93	63.174	ENSPKIG00000007001	rbm4.3	99	61.864	Paramormyrops_kingsleyae
ENSPREG00000002093	-	100	96.254	ENSPLAG00000006077	rbm4.3	100	96.254	Poecilia_latipinna
ENSPREG00000002093	-	99	64.589	ENSPLAG00000006131	rbm4.3	99	63.636	Poecilia_latipinna
ENSPREG00000002093	-	99	64.589	ENSPMEG00000024271	rbm4.3	98	63.873	Poecilia_mexicana
ENSPREG00000002093	-	99	65.156	ENSPMEG00000024263	rbm4.3	99	64.205	Poecilia_mexicana
ENSPREG00000002093	-	100	96.821	ENSPMEG00000024260	rbm4.3	100	96.821	Poecilia_mexicana
ENSPREG00000002093	-	99	62.393	ENSPNYG00000018541	rbm4.3	99	62.817	Pundamilia_nyererei
ENSPREG00000002093	-	100	80.114	ENSPNYG00000018564	rbm4.3	100	79.545	Pundamilia_nyererei
ENSPREG00000002093	-	99	60.556	ENSPNAG00000013053	rbm4.3	99	62.050	Pygocentrus_nattereri
ENSPREG00000002093	-	99	59.401	ENSSFOG00015015563	rbm4.3	99	59.178	Scleropages_formosus
ENSPREG00000002093	-	99	64.387	ENSSMAG00000013644	rbm4.3	99	64.124	Scophthalmus_maximus
ENSPREG00000002093	-	100	71.307	ENSSMAG00000013653	rbm4.3	100	71.307	Scophthalmus_maximus
ENSPREG00000002093	-	99	65.043	ENSSDUG00000018435	rbm4.3	99	65.254	Seriola_dumerili
ENSPREG00000002093	-	100	75.143	ENSSDUG00000018422	rbm4.3	100	74.571	Seriola_dumerili
ENSPREG00000002093	-	100	74.571	ENSSLDG00000017182	rbm4.3	100	74.000	Seriola_lalandi_dorsalis
ENSPREG00000002093	-	99	65.043	ENSSLDG00000017204	rbm4.3	99	65.254	Seriola_lalandi_dorsalis
ENSPREG00000002093	-	99	64.672	ENSSPAG00000008062	rbm4.3	99	65.070	Stegastes_partitus
ENSPREG00000002093	-	100	73.429	ENSSPAG00000008041	rbm4.3	85	74.000	Stegastes_partitus
ENSPREG00000002093	-	99	63.842	ENSTRUG00000020901	rbm4.3	99	63.944	Takifugu_rubripes
ENSPREG00000002093	-	100	73.011	ENSTRUG00000023874	rbm4.3	100	73.580	Takifugu_rubripes
ENSPREG00000002093	-	99	61.080	ENSTNIG00000005668	rbm4.3	99	60.282	Tetraodon_nigroviridis
ENSPREG00000002093	-	97	96.716	ENSXCOG00000005996	rbm4.3	99	95.954	Xiphophorus_couchianus
ENSPREG00000002093	-	99	64.589	ENSXCOG00000006001	rbm4.3	99	63.352	Xiphophorus_couchianus
ENSPREG00000002093	-	100	96.821	ENSXMAG00000025173	rbm4.3	100	96.821	Xiphophorus_maculatus
ENSPREG00000002093	-	99	65.156	ENSXMAG00000011698	rbm4.3	99	63.920	Xiphophorus_maculatus
ENSPREG00000002093	-	99	64.023	ENSXMAG00000021997	rbm4.3	99	63.068	Xiphophorus_maculatus