EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000002173 (Gene tree)
Gene ID
103467732
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
38929 bases
Position
chrLG7:17292257-17331185
Accession
103467732
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000003027YTHPF04146.156.8e-4111
ENSPREP00000003009YTHPF04146.156.9e-4111
ENSPREP00000002990YTHPF04146.156.9e-4111
ENSPREP00000002981YTHPF04146.157e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000003079-1695-ENSPREP00000003027564 (aa)--
ENSPRET00000003061-2158XM_008414389ENSPREP00000003009591 (aa)XP_008412611-
ENSPRET00000003041-2203-ENSPREP00000002990606 (aa)--
ENSPRET00000003033-2531-ENSPREP00000002981609 (aa)--
Gene Model
Click here to download ENSPREG00000002173's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002173's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000002173ythdf19777.108ENSPREG00000017662YTHDF19875.246
ENSPREG00000002173ythdf19958.581ENSPREG00000019412ythdf29859.699
ENSPREG00000002173ythdf19760.601ENSPREG00000019781ythdf39659.643
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000002173ythdf19872.549ENSG00000149658YTHDF19971.880Homo_sapiens
ENSPREG00000002173ythdf110089.839ENSAPOG00000004358ythdf19991.274Acanthochromis_polyacanthus
ENSPREG00000002173ythdf19977.090ENSAPOG00000010796YTHDF19979.895Acanthochromis_polyacanthus
ENSPREG00000002173ythdf19572.407ENSAMEG00000017323YTHDF19573.224Ailuropoda_melanoleuca
ENSPREG00000002173ythdf19780.581ENSACIG00000020083YTHDF19980.462Amphilophus_citrinellus
ENSPREG00000002173ythdf19786.022ENSACIG00000011264ythdf19986.213Amphilophus_citrinellus
ENSPREG00000002173ythdf19779.129ENSAOCG00000012567YTHDF19979.469Amphiprion_ocellaris
ENSPREG00000002173ythdf110090.066ENSAOCG00000022251ythdf110090.066Amphiprion_ocellaris
ENSPREG00000002173ythdf19779.310ENSAPEG00000008750YTHDF19979.646Amphiprion_percula
ENSPREG00000002173ythdf110089.822ENSAPEG00000021878ythdf110089.822Amphiprion_percula
ENSPREG00000002173ythdf110089.123ENSATEG00000023840ythdf110089.773Anabas_testudineus
ENSPREG00000002173ythdf19781.159ENSATEG00000005996YTHDF19980.639Anabas_testudineus
ENSPREG00000002173ythdf19573.346ENSAPLG00000005985YTHDF19673.224Anas_platyrhynchos
ENSPREG00000002173ythdf19872.647ENSACAG00000005560YTHDF19972.203Anolis_carolinensis
ENSPREG00000002173ythdf19960.885ENSANAG00000021022-9960.531Aotus_nancymaae
ENSPREG00000002173ythdf19872.711ENSANAG00000034786-9971.858Aotus_nancymaae
ENSPREG00000002173ythdf19779.492ENSACLG00000025518YTHDF19979.823Astatotilapia_calliptera
ENSPREG00000002173ythdf19770.939ENSBTAG00000010383YTHDF19970.123Bos_taurus
ENSPREG00000002173ythdf19872.531ENSCJAG00000010056YTHDF19971.681Callithrix_jacchus
ENSPREG00000002173ythdf18972.781ENSCAFG00000012772YTHDF19872.674Canis_familiaris
ENSPREG00000002173ythdf18972.781ENSCAFG00020001214YTHDF19872.674Canis_lupus_dingo
ENSPREG00000002173ythdf19770.463ENSCHIG00000026494YTHDF19970.000Capra_hircus
ENSPREG00000002173ythdf19673.112ENSTSYG00000033436YTHDF19773.188Carlito_syrichta
ENSPREG00000002173ythdf19772.333ENSCAPG00000002544YTHDF19768.182Cavia_aperea
ENSPREG00000002173ythdf19871.634ENSCPOG00000010202YTHDF19970.299Cavia_porcellus
ENSPREG00000002173ythdf19971.429ENSCCAG00000024650YTHDF19971.705Cebus_capucinus
ENSPREG00000002173ythdf19872.711ENSCATG00000033272YTHDF19972.085Cercocebus_atys
ENSPREG00000002173ythdf19872.043ENSCLAG00000005989YTHDF19971.781Chinchilla_lanigera
ENSPREG00000002173ythdf19872.711ENSCSAG00000016266YTHDF19972.085Chlorocebus_sabaeus
ENSPREG00000002173ythdf19873.571ENSCPBG00000027183YTHDF19972.711Chrysemys_picta_bellii
ENSPREG00000002173ythdf19573.704ENSCANG00000029082YTHDF19573.042Colobus_angolensis_palliatus
ENSPREG00000002173ythdf19972.389ENSCGRG00001016568Ythdf19971.504Cricetulus_griseus_chok1gshd
ENSPREG00000002173ythdf19573.333ENSCGRG00000009207Ythdf19772.445Cricetulus_griseus_crigri
ENSPREG00000002173ythdf19785.379ENSCSEG00000020623YTHDF19987.170Cynoglossus_semilaevis
ENSPREG00000002173ythdf19580.597ENSCVAG00000014378YTHDF19879.570Cyprinodon_variegatus
ENSPREG00000002173ythdf110094.146ENSCVAG00000017940ythdf110093.984Cyprinodon_variegatus
ENSPREG00000002173ythdf19981.032ENSDARG00000016447ythdf19980.844Danio_rerio
ENSPREG00000002173ythdf19871.147ENSDNOG00000043590YTHDF19971.731Dasypus_novemcinctus
ENSPREG00000002173ythdf19671.087ENSDORG00000002879Ythdf19371.325Dipodomys_ordii
ENSPREG00000002173ythdf17858.503ENSETEG00000017860-9858.503Echinops_telfairi
ENSPREG00000002173ythdf110072.359ENSEASG00005023186YTHDF19971.858Equus_asinus_asinus
ENSPREG00000002173ythdf19972.695ENSECAG00000019475YTHDF19872.621Equus_caballus
ENSPREG00000002173ythdf19072.780ENSEEUG00000007461YTHDF19871.810Erinaceus_europaeus
ENSPREG00000002173ythdf19972.019ENSELUG00000001906YTHDF19878.195Esox_lucius
ENSPREG00000002173ythdf19983.876ENSELUG00000022768ythdf19984.390Esox_lucius
ENSPREG00000002173ythdf19771.248ENSFCAG00000008917YTHDF19971.504Felis_catus
ENSPREG00000002173ythdf19872.857ENSFALG00000010463YTHDF19971.831Ficedula_albicollis
ENSPREG00000002173ythdf19872.072ENSFDAG00000019602YTHDF19971.504Fukomys_damarensis
ENSPREG00000002173ythdf110095.765ENSFHEG00000023218ythdf110095.765Fundulus_heteroclitus
ENSPREG00000002173ythdf19977.851ENSFHEG00000002540YTHDF19880.651Fundulus_heteroclitus
ENSPREG00000002173ythdf15782.647ENSGMOG00000019610ythdf19980.820Gadus_morhua
ENSPREG00000002173ythdf19872.193ENSGALG00000005745YTHDF19972.085Gallus_gallus
ENSPREG00000002173ythdf19976.589ENSGAFG00000021100YTHDF19878.674Gambusia_affinis
ENSPREG00000002173ythdf19986.656ENSGACG00000012014ythdf19986.656Gasterosteus_aculeatus
ENSPREG00000002173ythdf19978.388ENSGACG00000002613YTHDF19978.731Gasterosteus_aculeatus
ENSPREG00000002173ythdf19873.393ENSGAGG00000003007YTHDF19972.840Gopherus_agassizii
ENSPREG00000002173ythdf19872.549ENSGGOG00000008340YTHDF19971.880Gorilla_gorilla
ENSPREG00000002173ythdf19779.310ENSHBUG00000004875YTHDF19979.646Haplochromis_burtoni
ENSPREG00000002173ythdf19989.803ENSHBUG00000011284ythdf19790.132Haplochromis_burtoni
ENSPREG00000002173ythdf19872.072ENSHGLG00000006585YTHDF19971.858Heterocephalus_glaber_female
ENSPREG00000002173ythdf19872.072ENSHGLG00100004683YTHDF19971.858Heterocephalus_glaber_male
ENSPREG00000002173ythdf110085.738ENSHCOG00000008866ythdf110085.738Hippocampus_comes
ENSPREG00000002173ythdf19975.208ENSHCOG00000011303YTHDF19878.450Hippocampus_comes
ENSPREG00000002173ythdf19978.833ENSIPUG00000000425Ythdf19978.514Ictalurus_punctatus
ENSPREG00000002173ythdf19573.148ENSSTOG00000023001YTHDF19772.875Ictidomys_tridecemlineatus
ENSPREG00000002173ythdf19773.091ENSJJAG00000013589Ythdf19772.313Jaculus_jaculus
ENSPREG00000002173ythdf19977.333ENSKMAG00000017472YTHDF19879.211Kryptolebias_marmoratus
ENSPREG00000002173ythdf110091.967ENSKMAG00000005595ythdf110091.967Kryptolebias_marmoratus
ENSPREG00000002173ythdf110089.577ENSLBEG00000014105ythdf110089.577Labrus_bergylta
ENSPREG00000002173ythdf19779.070ENSLBEG00000012068YTHDF19978.846Labrus_bergylta
ENSPREG00000002173ythdf19772.352ENSLACG00000014195YTHDF19872.890Latimeria_chalumnae
ENSPREG00000002173ythdf19974.216ENSLOCG00000005020ythdf19675.524Lepisosteus_oculatus
ENSPREG00000002173ythdf19872.760ENSLAFG00000008884YTHDF19972.085Loxodonta_africana
ENSPREG00000002173ythdf19872.711ENSMFAG00000042868YTHDF19972.085Macaca_fascicularis
ENSPREG00000002173ythdf19873.418ENSMMUG00000009227YTHDF19972.085Macaca_mulatta
ENSPREG00000002173ythdf19872.711ENSMNEG00000030851YTHDF19972.085Macaca_nemestrina
ENSPREG00000002173ythdf19773.905ENSMLEG00000009252YTHDF19773.224Mandrillus_leucophaeus
ENSPREG00000002173ythdf110088.925ENSMAMG00000024255ythdf110088.254Mastacembelus_armatus
ENSPREG00000002173ythdf19780.036ENSMAMG00000011072YTHDF19979.965Mastacembelus_armatus
ENSPREG00000002173ythdf19779.310ENSMZEG00005023596YTHDF19979.646Maylandia_zebra
ENSPREG00000002173ythdf110089.869ENSMZEG00005026397ythdf110090.196Maylandia_zebra
ENSPREG00000002173ythdf19573.162ENSMGAG00000006139YTHDF19673.042Meleagris_gallopavo
ENSPREG00000002173ythdf19972.163ENSMAUG00000017660Ythdf19971.327Mesocricetus_auratus
ENSPREG00000002173ythdf19872.222ENSMICG00000032266YTHDF19971.555Microcebus_murinus
ENSPREG00000002173ythdf19872.531ENSMOCG00000013573Ythdf19971.605Microtus_ochrogaster
ENSPREG00000002173ythdf19976.639ENSMMOG00000020467YTHDF19975.121Mola_mola
ENSPREG00000002173ythdf19785.642ENSMMOG00000017500ythdf19984.516Mola_mola
ENSPREG00000002173ythdf18973.819ENSMODG00000016842YTHDF19873.062Monodelphis_domestica
ENSPREG00000002173ythdf19779.422ENSMALG00000022209YTHDF19978.938Monopterus_albus
ENSPREG00000002173ythdf110087.419ENSMALG00000015672ythdf110087.258Monopterus_albus
ENSPREG00000002173ythdf19872.352MGP_CAROLIEiJ_G0024790Ythdf19971.504Mus_caroli
ENSPREG00000002173ythdf19872.352ENSMUSG00000038848Ythdf19971.504Mus_musculus
ENSPREG00000002173ythdf19872.352MGP_PahariEiJ_G0026237Ythdf19971.504Mus_pahari
ENSPREG00000002173ythdf19872.352MGP_SPRETEiJ_G0025715Ythdf19971.504Mus_spretus
ENSPREG00000002173ythdf18971.089ENSMPUG00000008111YTHDF19870.370Mustela_putorius_furo
ENSPREG00000002173ythdf19673.540ENSMLUG00000002241YTHDF19573.140Myotis_lucifugus
ENSPREG00000002173ythdf19872.531ENSNGAG00000000334Ythdf19971.908Nannospalax_galili
ENSPREG00000002173ythdf19779.310ENSNBRG00000015321YTHDF19979.646Neolamprologus_brichardi
ENSPREG00000002173ythdf19788.889ENSNBRG00000008213ythdf19889.280Neolamprologus_brichardi
ENSPREG00000002173ythdf19568.343ENSOPRG00000001758-9967.412Ochotona_princeps
ENSPREG00000002173ythdf19759.066ENSODEG00000000074-9957.407Octodon_degus
ENSPREG00000002173ythdf19970.671ENSODEG00000004380-9971.025Octodon_degus
ENSPREG00000002173ythdf19788.679ENSONIG00000016799ythdf19989.894Oreochromis_niloticus
ENSPREG00000002173ythdf19872.939ENSOANG00000003723YTHDF19972.438Ornithorhynchus_anatinus
ENSPREG00000002173ythdf110088.399ENSORLG00000014665YTHDF110087.255Oryzias_latipes
ENSPREG00000002173ythdf19975.947ENSORLG00000009739YTHDF19880.072Oryzias_latipes
ENSPREG00000002173ythdf110088.871ENSORLG00020000307ythdf110087.725Oryzias_latipes_hni
ENSPREG00000002173ythdf19976.667ENSORLG00020001332YTHDF19880.581Oryzias_latipes_hni
ENSPREG00000002173ythdf19975.618ENSORLG00015018321YTHDF19879.710Oryzias_latipes_hsok
ENSPREG00000002173ythdf110088.707ENSORLG00015006302ythdf110087.561Oryzias_latipes_hsok
ENSPREG00000002173ythdf110090.000ENSOMEG00000002941YTHDF110089.016Oryzias_melastigma
ENSPREG00000002173ythdf19977.273ENSOMEG00000011843YTHDF19976.375Oryzias_melastigma
ENSPREG00000002173ythdf19871.250ENSOGAG00000000480YTHDF19970.609Otolemur_garnettii
ENSPREG00000002173ythdf19570.356ENSOARG00000011639YTHDF18785.938Ovis_aries
ENSPREG00000002173ythdf19773.514ENSPPAG00000023277YTHDF19773.007Pan_paniscus
ENSPREG00000002173ythdf19771.790ENSPPRG00000020805YTHDF19972.212Panthera_pardus
ENSPREG00000002173ythdf18279.018ENSPTIG00000017355YTHDF19578.390Panthera_tigris_altaica
ENSPREG00000002173ythdf19872.549ENSPTRG00000013730YTHDF19971.880Pan_troglodytes
ENSPREG00000002173ythdf19872.711ENSPANG00000021472YTHDF19972.085Papio_anubis
ENSPREG00000002173ythdf19974.159ENSPKIG00000005427ythdf19972.824Paramormyrops_kingsleyae
ENSPREG00000002173ythdf19973.958ENSPKIG00000005026YTHDF19974.048Paramormyrops_kingsleyae
ENSPREG00000002173ythdf19773.370ENSPSIG00000005529YTHDF19673.732Pelodiscus_sinensis
ENSPREG00000002173ythdf19579.433ENSPMGG00000009101YTHDF19979.002Periophthalmus_magnuspinnatus
ENSPREG00000002173ythdf19585.409ENSPMGG00000015328ythdf19884.843Periophthalmus_magnuspinnatus
ENSPREG00000002173ythdf19773.358ENSPEMG00000020199Ythdf19972.263Peromyscus_maniculatus_bairdii
ENSPREG00000002173ythdf19972.792ENSPCIG00000017170YTHDF19873.256Phascolarctos_cinereus
ENSPREG00000002173ythdf110098.845ENSPFOG00000005405ythdf110098.845Poecilia_formosa
ENSPREG00000002173ythdf110098.936ENSPLAG00000006653ythdf110098.936Poecilia_latipinna
ENSPREG00000002173ythdf110075.667ENSPLAG00000006298YTHDF19975.594Poecilia_latipinna
ENSPREG00000002173ythdf110099.324ENSPMEG00000023753ythdf110099.324Poecilia_mexicana
ENSPREG00000002173ythdf19976.589ENSPMEG00000020969-9977.487Poecilia_mexicana
ENSPREG00000002173ythdf18685.787ENSPPYG00000011226YTHDF19987.562Pongo_abelii
ENSPREG00000002173ythdf19071.316ENSPCAG00000002452YTHDF110069.981Procavia_capensis
ENSPREG00000002173ythdf19872.581ENSPCOG00000025969YTHDF19971.908Propithecus_coquereli
ENSPREG00000002173ythdf19768.624ENSPVAG00000017568YTHDF19768.498Pteropus_vampyrus
ENSPREG00000002173ythdf19989.803ENSPNYG00000014007ythdf19989.236Pundamilia_nyererei
ENSPREG00000002173ythdf19779.310ENSPNYG00000002266YTHDF19979.646Pundamilia_nyererei
ENSPREG00000002173ythdf19981.970ENSPNAG00000012447ythdf19982.085Pygocentrus_nattereri
ENSPREG00000002173ythdf19872.352ENSRNOG00000027015Ythdf19971.681Rattus_norvegicus
ENSPREG00000002173ythdf19871.813ENSRBIG00000044959YTHDF19971.025Rhinopithecus_bieti
ENSPREG00000002173ythdf19871.813ENSRROG00000033014YTHDF19971.025Rhinopithecus_roxellana
ENSPREG00000002173ythdf19672.509ENSSBOG00000027278YTHDF19871.068Saimiri_boliviensis_boliviensis
ENSPREG00000002173ythdf19573.752ENSSHAG00000010430YTHDF18573.953Sarcophilus_harrisii
ENSPREG00000002173ythdf19975.652ENSSFOG00015000284ythdf19974.754Scleropages_formosus
ENSPREG00000002173ythdf19683.838ENSSMAG00000007635YTHDF19779.567Scophthalmus_maximus
ENSPREG00000002173ythdf17794.118ENSSMAG00000013715ythdf19689.560Scophthalmus_maximus
ENSPREG00000002173ythdf110089.499ENSSDUG00000000435ythdf110089.499Seriola_dumerili
ENSPREG00000002173ythdf19581.273ENSSDUG00000015823YTHDF19680.220Seriola_dumerili
ENSPREG00000002173ythdf19975.407ENSSLDG00000001054YTHDF19392.821Seriola_lalandi_dorsalis
ENSPREG00000002173ythdf19989.286ENSSLDG00000024948ythdf19989.286Seriola_lalandi_dorsalis
ENSPREG00000002173ythdf18973.529ENSSPUG00000015143YTHDF19872.816Sphenodon_punctatus
ENSPREG00000002173ythdf110089.727ENSSPAG00000014989ythdf110089.727Stegastes_partitus
ENSPREG00000002173ythdf19977.190ENSSPAG00000003666YTHDF19978.772Stegastes_partitus
ENSPREG00000002173ythdf19871.942ENSSSCG00000040086YTHDF19970.796Sus_scrofa
ENSPREG00000002173ythdf19573.162ENSTGUG00000007565YTHDF19773.042Taeniopygia_guttata
ENSPREG00000002173ythdf19776.897ENSTRUG00000005049YTHDF19976.694Takifugu_rubripes
ENSPREG00000002173ythdf110086.855ENSTRUG00000004288ythdf110086.855Takifugu_rubripes
ENSPREG00000002173ythdf19777.273ENSTNIG00000003975YTHDF19977.046Tetraodon_nigroviridis
ENSPREG00000002173ythdf19980.976ENSTNIG00000012490ythdf19983.538Tetraodon_nigroviridis
ENSPREG00000002173ythdf19971.504ENSTTRG00000001804YTHDF19971.025Tursiops_truncatus
ENSPREG00000002173ythdf19672.694ENSUAMG00000011021YTHDF19872.674Ursus_americanus
ENSPREG00000002173ythdf18972.387ENSUMAG00000022290YTHDF19872.481Ursus_maritimus
ENSPREG00000002173ythdf18972.781ENSVVUG00000015275YTHDF19872.481Vulpes_vulpes
ENSPREG00000002173ythdf19773.310ENSXETG00000027086ythdf19672.776Xenopus_tropicalis
ENSPREG00000002173ythdf19776.844ENSXCOG00000008115YTHDF19975.738Xiphophorus_couchianus
ENSPREG00000002173ythdf19898.378ENSXCOG00000002490ythdf19698.378Xiphophorus_couchianus
ENSPREG00000002173ythdf110098.515ENSXMAG00000008525ythdf110098.515Xiphophorus_maculatus
ENSPREG00000002173ythdf19976.589ENSXMAG00000015644YTHDF19879.391Xiphophorus_maculatus

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