EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002277 (Gene tree)
Gene ID: 103472896
Gene Symbol: skiv2l
Alias: -
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 26475 bases
Position: chrLG11:24921527-24948001
Accession: 103472896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003206	rRNA_proc-arch	PF13234.6	7.2e-27	1	1
ENSPREP00000003206	DEAD	PF00270.29	2.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003260	-	3543	XM_008422762	ENSPREP00000003206	1180 (aa)	XP_008420984	-

Gene Model

Click here to download ENSPREG00000002277's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002277	skiv2l	79	35.818	ENSPREG00000003089	mtrex	92	35.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002277	skiv2l	98	59.383	ENSG00000204351	SKIV2L	99	59.646	Homo_sapiens
ENSPREG00000002277	skiv2l	99	83.803	ENSAPOG00000008257	skiv2l	99	81.606	Acanthochromis_polyacanthus
ENSPREG00000002277	skiv2l	98	59.448	ENSAMEG00000002078	SKIV2L	99	59.646	Ailuropoda_melanoleuca
ENSPREG00000002277	skiv2l	99	82.563	ENSACIG00000016719	skiv2l	100	79.806	Amphilophus_citrinellus
ENSPREG00000002277	skiv2l	99	84.367	ENSAOCG00000017352	skiv2l	99	83.400	Amphiprion_ocellaris
ENSPREG00000002277	skiv2l	99	84.529	ENSAPEG00000001055	skiv2l	99	83.481	Amphiprion_percula
ENSPREG00000002277	skiv2l	99	83.118	ENSATEG00000007601	skiv2l	99	84.572	Anabas_testudineus
ENSPREG00000002277	skiv2l	97	68.345	ENSACAG00000011746	SKIV2L	99	61.356	Anolis_carolinensis
ENSPREG00000002277	skiv2l	98	59.870	ENSANAG00000037992	SKIV2L	99	60.129	Aotus_nancymaae
ENSPREG00000002277	skiv2l	99	85.406	ENSACLG00000006886	skiv2l	99	85.548	Astatotilapia_calliptera
ENSPREG00000002277	skiv2l	98	76.642	ENSAMXG00000011517	skiv2l	99	77.047	Astyanax_mexicanus
ENSPREG00000002277	skiv2l	98	59.951	ENSBTAG00000005587	SKIV2L	99	59.646	Bos_taurus
ENSPREG00000002277	skiv2l	79	46.461	WBGene00008502	skih-2	78	46.461	Caenorhabditis_elegans
ENSPREG00000002277	skiv2l	98	59.951	ENSCJAG00000002263	SKIV2L	99	59.807	Callithrix_jacchus
ENSPREG00000002277	skiv2l	96	66.287	ENSCAFG00000000679	SKIV2L	99	59.566	Canis_familiaris
ENSPREG00000002277	skiv2l	96	66.287	ENSCAFG00020000948	SKIV2L	99	59.566	Canis_lupus_dingo
ENSPREG00000002277	skiv2l	98	60.032	ENSCHIG00000012897	SKIV2L	99	60.048	Capra_hircus
ENSPREG00000002277	skiv2l	96	66.081	ENSTSYG00000012133	SKIV2L	99	58.842	Carlito_syrichta
ENSPREG00000002277	skiv2l	98	60.458	ENSCPOG00000001307	SKIV2L	99	60.307	Cavia_porcellus
ENSPREG00000002277	skiv2l	98	60.114	ENSCCAG00000026206	SKIV2L	99	60.048	Cebus_capucinus
ENSPREG00000002277	skiv2l	96	66.598	ENSCATG00000036901	SKIV2L	99	59.262	Cercocebus_atys
ENSPREG00000002277	skiv2l	98	59.951	ENSCLAG00000007678	SKIV2L	99	58.734	Chinchilla_lanigera
ENSPREG00000002277	skiv2l	98	59.545	ENSCSAG00000008988	SKIV2L	99	59.486	Chlorocebus_sabaeus
ENSPREG00000002277	skiv2l	83	68.770	ENSCPBG00000000343	SKIV2L	99	58.571	Chrysemys_picta_bellii
ENSPREG00000002277	skiv2l	92	50.043	ENSCING00000005576	-	99	50.043	Ciona_intestinalis
ENSPREG00000002277	skiv2l	96	66.805	ENSCANG00000039709	SKIV2L	100	58.413	Colobus_angolensis_palliatus
ENSPREG00000002277	skiv2l	98	60.456	ENSCGRG00001008385	Skiv2l	99	60.306	Cricetulus_griseus_chok1gshd
ENSPREG00000002277	skiv2l	99	81.848	ENSCSEG00000011326	skiv2l	99	82.091	Cynoglossus_semilaevis
ENSPREG00000002277	skiv2l	99	91.590	ENSCVAG00000003072	skiv2l	99	91.590	Cyprinodon_variegatus
ENSPREG00000002277	skiv2l	99	80.080	ENSDARG00000062206	skiv2l	99	79.839	Danio_rerio
ENSPREG00000002277	skiv2l	91	63.399	ENSDNOG00000037590	SKIV2L	93	62.853	Dasypus_novemcinctus
ENSPREG00000002277	skiv2l	93	45.047	FBgn0039117	tst	97	45.047	Drosophila_melanogaster
ENSPREG00000002277	skiv2l	70	76.389	ENSETEG00000009522	SKIV2L	68	76.389	Echinops_telfairi
ENSPREG00000002277	skiv2l	90	52.163	ENSEBUG00000013680	-	99	51.233	Eptatretus_burgeri
ENSPREG00000002277	skiv2l	90	66.390	ENSEASG00005015534	SKIV2L	100	60.757	Equus_asinus_asinus
ENSPREG00000002277	skiv2l	90	66.927	ENSECAG00000021823	SKIV2L	95	59.677	Equus_caballus
ENSPREG00000002277	skiv2l	54	73.913	ENSEEUG00000005049	SKIV2L	57	73.913	Erinaceus_europaeus
ENSPREG00000002277	skiv2l	99	81.818	ENSELUG00000000181	skiv2l	98	81.397	Esox_lucius
ENSPREG00000002277	skiv2l	98	60.097	ENSFCAG00000004519	SKIV2L	99	60.129	Felis_catus
ENSPREG00000002277	skiv2l	96	65.249	ENSFDAG00000009438	SKIV2L	99	59.003	Fukomys_damarensis
ENSPREG00000002277	skiv2l	99	88.010	ENSFHEG00000008853	skiv2l	99	87.927	Fundulus_heteroclitus
ENSPREG00000002277	skiv2l	99	78.077	ENSGMOG00000005926	skiv2l	99	77.669	Gadus_morhua
ENSPREG00000002277	skiv2l	79	56.726	ENSGALG00000035499	SKIV2L	98	56.508	Gallus_gallus
ENSPREG00000002277	skiv2l	99	90.008	ENSGAFG00000002382	skiv2l	99	90.008	Gambusia_affinis
ENSPREG00000002277	skiv2l	99	83.589	ENSGACG00000002927	skiv2l	99	83.589	Gasterosteus_aculeatus
ENSPREG00000002277	skiv2l	98	59.545	ENSGGOG00000002270	SKIV2L	99	59.405	Gorilla_gorilla
ENSPREG00000002277	skiv2l	99	84.551	ENSHBUG00000000726	skiv2l	99	84.705	Haplochromis_burtoni
ENSPREG00000002277	skiv2l	96	65.942	ENSHGLG00000016596	SKIV2L	99	59.149	Heterocephalus_glaber_female
ENSPREG00000002277	skiv2l	96	64.174	ENSHGLG00100014161	SKIV2L	99	57.844	Heterocephalus_glaber_male
ENSPREG00000002277	skiv2l	98	84.346	ENSHCOG00000007191	skiv2l	100	84.346	Hippocampus_comes
ENSPREG00000002277	skiv2l	98	83.795	ENSIPUG00000016263	skiv2l	100	78.013	Ictalurus_punctatus
ENSPREG00000002277	skiv2l	99	59.615	ENSSTOG00000014596	SKIV2L	99	59.696	Ictidomys_tridecemlineatus
ENSPREG00000002277	skiv2l	51	86.400	ENSLACG00000002986	-	60	61.905	Latimeria_chalumnae
ENSPREG00000002277	skiv2l	98	59.708	ENSLAFG00000014231	SKIV2L	99	59.503	Loxodonta_africana
ENSPREG00000002277	skiv2l	96	66.909	ENSMFAG00000034235	SKIV2L	99	59.423	Macaca_fascicularis
ENSPREG00000002277	skiv2l	96	66.909	ENSMMUG00000000736	SKIV2L	99	59.423	Macaca_mulatta
ENSPREG00000002277	skiv2l	96	66.909	ENSMNEG00000044474	SKIV2L	99	59.423	Macaca_nemestrina
ENSPREG00000002277	skiv2l	96	66.805	ENSMLEG00000030512	SKIV2L	99	59.423	Mandrillus_leucophaeus
ENSPREG00000002277	skiv2l	99	86.337	ENSMAMG00000002927	skiv2l	100	86.337	Mastacembelus_armatus
ENSPREG00000002277	skiv2l	99	85.406	ENSMZEG00005026415	skiv2l	99	85.548	Maylandia_zebra
ENSPREG00000002277	skiv2l	59	59.024	ENSMGAG00000001320	SKIV2L	95	50.111	Meleagris_gallopavo
ENSPREG00000002277	skiv2l	98	59.431	ENSMAUG00000018613	Skiv2l	99	59.342	Mesocricetus_auratus
ENSPREG00000002277	skiv2l	98	60.114	ENSMICG00000046331	SKIV2L	99	60.129	Microcebus_murinus
ENSPREG00000002277	skiv2l	96	64.463	ENSMOCG00000014240	Skiv2l	99	58.776	Microtus_ochrogaster
ENSPREG00000002277	skiv2l	99	87.352	ENSMMOG00000014547	skiv2l	99	87.352	Mola_mola
ENSPREG00000002277	skiv2l	97	67.288	ENSMODG00000015052	SKIV2L	93	67.288	Monodelphis_domestica
ENSPREG00000002277	skiv2l	99	81.154	ENSMALG00000010535	skiv2l	99	81.072	Monopterus_albus
ENSPREG00000002277	skiv2l	98	60.195	MGP_CAROLIEiJ_G0021477	Skiv2l	99	60.048	Mus_caroli
ENSPREG00000002277	skiv2l	96	66.425	ENSMUSG00000040356	Skiv2l	99	60.209	Mus_musculus
ENSPREG00000002277	skiv2l	98	60.764	MGP_PahariEiJ_G0020472	Skiv2l	99	60.611	Mus_pahari
ENSPREG00000002277	skiv2l	96	66.218	MGP_SPRETEiJ_G0022382	Skiv2l	99	60.048	Mus_spretus
ENSPREG00000002277	skiv2l	96	66.081	ENSMPUG00000010567	SKIV2L	99	58.880	Mustela_putorius_furo
ENSPREG00000002277	skiv2l	98	59.157	ENSMLUG00000000628	SKIV2L	99	59.102	Myotis_lucifugus
ENSPREG00000002277	skiv2l	99	85.467	ENSNBRG00000018650	skiv2l	99	85.455	Neolamprologus_brichardi
ENSPREG00000002277	skiv2l	96	65.628	ENSNLEG00000006451	SKIV2L	93	65.628	Nomascus_leucogenys
ENSPREG00000002277	skiv2l	74	68.126	ENSMEUG00000006072	SKIV2L	70	68.126	Notamacropus_eugenii
ENSPREG00000002277	skiv2l	96	66.287	ENSOPRG00000003972	SKIV2L	99	59.631	Ochotona_princeps
ENSPREG00000002277	skiv2l	98	59.870	ENSODEG00000017516	SKIV2L	99	59.566	Octodon_degus
ENSPREG00000002277	skiv2l	99	84.996	ENSONIG00000013500	skiv2l	99	85.158	Oreochromis_niloticus
ENSPREG00000002277	skiv2l	96	66.909	ENSOCUG00000007019	SKIV2L	99	59.807	Oryctolagus_cuniculus
ENSPREG00000002277	skiv2l	98	86.100	ENSORLG00000002021	skiv2l	99	82.669	Oryzias_latipes
ENSPREG00000002277	skiv2l	98	89.117	ENSORLG00020009462	skiv2l	99	84.281	Oryzias_latipes_hni
ENSPREG00000002277	skiv2l	98	88.809	ENSORLG00015016750	skiv2l	99	83.836	Oryzias_latipes_hsok
ENSPREG00000002277	skiv2l	99	83.172	ENSOMEG00000008531	skiv2l	99	83.172	Oryzias_melastigma
ENSPREG00000002277	skiv2l	98	59.058	ENSOGAG00000009578	SKIV2L	99	59.390	Otolemur_garnettii
ENSPREG00000002277	skiv2l	98	56.757	ENSOARG00000002411	-	99	56.669	Ovis_aries
ENSPREG00000002277	skiv2l	98	58.885	ENSPPAG00000040211	SKIV2L	100	58.753	Pan_paniscus
ENSPREG00000002277	skiv2l	98	60.260	ENSPPRG00000005017	SKIV2L	99	60.289	Panthera_pardus
ENSPREG00000002277	skiv2l	98	59.854	ENSPTIG00000021656	SKIV2L	99	59.887	Panthera_tigris_altaica
ENSPREG00000002277	skiv2l	98	59.464	ENSPTRG00000017997	SKIV2L	99	59.325	Pan_troglodytes
ENSPREG00000002277	skiv2l	96	66.079	ENSPANG00000011501	SKIV2L	100	58.500	Papio_anubis
ENSPREG00000002277	skiv2l	99	74.979	ENSPKIG00000011876	skiv2l	99	74.896	Paramormyrops_kingsleyae
ENSPREG00000002277	skiv2l	99	84.063	ENSPMGG00000019707	skiv2l	99	84.450	Periophthalmus_magnuspinnatus
ENSPREG00000002277	skiv2l	98	59.967	ENSPEMG00000019001	Skiv2l	99	59.872	Peromyscus_maniculatus_bairdii
ENSPREG00000002277	skiv2l	97	66.942	ENSPCIG00000018792	SKIV2L	99	60.545	Phascolarctos_cinereus
ENSPREG00000002277	skiv2l	99	90.572	ENSPFOG00000002424	skiv2l	99	90.572	Poecilia_formosa
ENSPREG00000002277	skiv2l	99	90.411	ENSPLAG00000018304	skiv2l	99	90.411	Poecilia_latipinna
ENSPREG00000002277	skiv2l	99	90.572	ENSPMEG00000006997	skiv2l	99	90.572	Poecilia_mexicana
ENSPREG00000002277	skiv2l	98	59.058	ENSPPYG00000016472	SKIV2L	99	59.003	Pongo_abelii
ENSPREG00000002277	skiv2l	77	76.316	ENSPCAG00000004178	SKIV2L	74	76.316	Procavia_capensis
ENSPREG00000002277	skiv2l	98	60.032	ENSPCOG00000010308	SKIV2L	99	59.968	Propithecus_coquereli
ENSPREG00000002277	skiv2l	98	59.464	ENSPVAG00000005136	SKIV2L	99	59.230	Pteropus_vampyrus
ENSPREG00000002277	skiv2l	99	87.162	ENSPNYG00000017853	skiv2l	99	87.162	Pundamilia_nyererei
ENSPREG00000002277	skiv2l	98	79.187	ENSPNAG00000011823	skiv2l	99	78.986	Pygocentrus_nattereri
ENSPREG00000002277	skiv2l	98	59.675	ENSRNOG00000000421	Skiv2l	99	59.887	Rattus_norvegicus
ENSPREG00000002277	skiv2l	96	65.808	ENSRBIG00000035485	SKIV2L	99	58.692	Rhinopithecus_bieti
ENSPREG00000002277	skiv2l	96	67.012	ENSRROG00000036429	SKIV2L	99	59.583	Rhinopithecus_roxellana
ENSPREG00000002277	skiv2l	80	42.326	YLR398C	-	77	42.326	Saccharomyces_cerevisiae
ENSPREG00000002277	skiv2l	98	59.626	ENSSBOG00000027920	SKIV2L	99	60.048	Saimiri_boliviensis_boliviensis
ENSPREG00000002277	skiv2l	97	66.977	ENSSHAG00000008963	SKIV2L	99	59.486	Sarcophilus_harrisii
ENSPREG00000002277	skiv2l	99	78.365	ENSSFOG00015016930	skiv2l	98	79.777	Scleropages_formosus
ENSPREG00000002277	skiv2l	99	82.915	ENSSMAG00000020185	skiv2l	99	82.508	Scophthalmus_maximus
ENSPREG00000002277	skiv2l	99	88.608	ENSSDUG00000019977	skiv2l	99	88.608	Seriola_dumerili
ENSPREG00000002277	skiv2l	99	86.160	ENSSLDG00000024382	skiv2l	99	86.160	Seriola_lalandi_dorsalis
ENSPREG00000002277	skiv2l	98	64.562	ENSSPUG00000012945	SKIV2L	92	64.664	Sphenodon_punctatus
ENSPREG00000002277	skiv2l	94	84.170	ENSSPAG00000012904	skiv2l	99	83.234	Stegastes_partitus
ENSPREG00000002277	skiv2l	97	66.701	ENSSSCG00000001424	SKIV2L	100	58.981	Sus_scrofa
ENSPREG00000002277	skiv2l	69	89.831	ENSTRUG00000000966	skiv2l	100	70.320	Takifugu_rubripes
ENSPREG00000002277	skiv2l	99	80.016	ENSTNIG00000004382	skiv2l	99	80.259	Tetraodon_nigroviridis
ENSPREG00000002277	skiv2l	92	62.454	ENSTBEG00000003462	SKIV2L	94	62.454	Tupaia_belangeri
ENSPREG00000002277	skiv2l	96	61.324	ENSTTRG00000005931	SKIV2L	99	55.707	Tursiops_truncatus
ENSPREG00000002277	skiv2l	98	59.708	ENSUAMG00000024336	SKIV2L	99	59.887	Ursus_americanus
ENSPREG00000002277	skiv2l	92	60.395	ENSUMAG00000012666	SKIV2L	100	60.671	Ursus_maritimus
ENSPREG00000002277	skiv2l	96	66.287	ENSVVUG00000022807	SKIV2L	99	59.566	Vulpes_vulpes
ENSPREG00000002277	skiv2l	99	57.200	ENSXETG00000010932	skiv2l	99	57.200	Xenopus_tropicalis
ENSPREG00000002277	skiv2l	99	91.086	ENSXCOG00000019517	skiv2l	98	91.086	Xiphophorus_couchianus
ENSPREG00000002277	skiv2l	99	90.000	ENSXMAG00000014079	skiv2l	99	90.000	Xiphophorus_maculatus