EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000002338 (Gene tree)
Gene ID: 103472897
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3496 bases
Position: chrLG11:24949352-24952847
Accession: 103472897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003241	RRM_1	PF00076.22	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003295	-	978	XM_008422764	ENSPREP00000003241	325 (aa)	XP_008420986	-

Gene Model

Click here to download ENSPREG00000002338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002338	nelfe	89	52.367	ENSG00000204356	NELFE	70	76.786	Homo_sapiens
ENSPREG00000002338	nelfe	74	77.679	ENSTSYG00000012132	-	65	77.679	Carlito_syrichta
ENSPREG00000002338	nelfe	74	77.679	ENSCANG00000022451	NELFE	63	77.679	Colobus_angolensis_palliatus
ENSPREG00000002338	nelfe	99	71.831	ENSDARG00000004343	nelfe	73	80.769	Danio_rerio
ENSPREG00000002338	nelfe	71	76.786	ENSDORG00000011705	Nelfe	63	76.786	Dipodomys_ordii
ENSPREG00000002338	nelfe	59	76.786	ENSEEUG00000005004	NELFE	51	76.786	Erinaceus_europaeus
ENSPREG00000002338	nelfe	100	80.112	ENSGAFG00000002349	nelfe	100	80.508	Gambusia_affinis
ENSPREG00000002338	nelfe	76	69.841	ENSMGAG00000001297	NELFE	58	84.375	Meleagris_gallopavo
ENSPREG00000002338	nelfe	73	71.429	ENSMLUG00000028182	-	63	71.429	Myotis_lucifugus
ENSPREG00000002338	nelfe	74	67.692	ENSMLUG00000030380	-	66	66.667	Myotis_lucifugus
ENSPREG00000002338	nelfe	74	66.667	ENSMLUG00000028069	-	64	66.667	Myotis_lucifugus
ENSPREG00000002338	nelfe	71	65.385	ENSMLUG00000028808	-	64	65.468	Myotis_lucifugus
ENSPREG00000002338	nelfe	99	53.846	ENSPTRG00000017996	NELFE	66	77.679	Pan_troglodytes
ENSPREG00000002338	nelfe	90	76.786	ENSPCIG00000018791	NELFE	74	76.786	Phascolarctos_cinereus
ENSPREG00000002338	nelfe	100	83.565	ENSPFOG00000003019	nelfe	100	84.401	Poecilia_formosa
ENSPREG00000002338	nelfe	100	83.565	ENSPMEG00000006918	nelfe	96	84.401	Poecilia_mexicana
ENSPREG00000002338	nelfe	99	55.041	ENSRBIG00000028593	-	64	77.679	Rhinopithecus_bieti
ENSPREG00000002338	nelfe	74	77.679	ENSRROG00000041993	NELFE	64	77.679	Rhinopithecus_roxellana
ENSPREG00000002338	nelfe	82	82.143	ENSXETG00000010931	nelfe	67	82.143	Xenopus_tropicalis
ENSPREG00000002338	nelfe	100	96.308	ENSXCOG00000019513	nelfe	100	96.308	Xiphophorus_couchianus