EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002385 (Gene tree)
Gene ID: 103481465
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 26121 bases
Position: chrLG19:10335324-10361444
Accession: 103481465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003294	RNA_pol_Rpb1_5	PF04998.17	1.7e-88	1	1
ENSPREP00000003328	RNA_pol_Rpb1_5	PF04998.17	1.8e-88	1	1
ENSPREP00000003367	RNA_pol_Rpb1_5	PF04998.17	2e-88	1	1
ENSPREP00000003367	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSPREP00000003294	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSPREP00000003328	RNA_pol_Rpb1_4	PF05000.17	1.2e-31	1	1
ENSPREP00000003294	RNA_pol_Rpb1_2	PF00623.20	9.2e-73	1	1
ENSPREP00000003328	RNA_pol_Rpb1_2	PF00623.20	9.3e-73	1	1
ENSPREP00000003367	RNA_pol_Rpb1_2	PF00623.20	9.4e-73	1	1
ENSPREP00000003367	RNA_pol_Rpb1_3	PF04983.18	2.9e-40	1	1
ENSPREP00000003294	RNA_pol_Rpb1_3	PF04983.18	2.9e-40	1	1
ENSPREP00000003328	RNA_pol_Rpb1_3	PF04983.18	2.9e-40	1	1
ENSPREP00000003294	RNA_pol_Rpb1_1	PF04997.12	3.5e-93	1	1
ENSPREP00000003367	RNA_pol_Rpb1_1	PF04997.12	1.2e-91	1	1
ENSPREP00000003328	RNA_pol_Rpb1_1	PF04997.12	1.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003382	-	6571	-	ENSPREP00000003328	1392 (aa)	-	-
ENSPRET00000003421	-	4215	-	ENSPREP00000003367	1404 (aa)	-	-
ENSPRET00000003348	-	6565	XM_008436921	ENSPREP00000003294	1390 (aa)	XP_008435143	UPI0004A33E70

Gene Model

Click here to download ENSPREG00000002385's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03020	RNA polymerase	KEGG
pret04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002385	polr3a	98	32.368	ENSPREG00000013122	polr2a	68	37.053
ENSPREG00000002385	polr3a	69	33.039	ENSPREG00000002389	polr1a	64	33.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002385	polr3a	100	89.856	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSPREG00000002385	polr3a	62	92.451	ENSAPOG00000022727	polr3a	99	92.451	Acanthochromis_polyacanthus
ENSPREG00000002385	polr3a	100	89.734	ENSAMEG00000017801	POLR3A	100	89.734	Ailuropoda_melanoleuca
ENSPREG00000002385	polr3a	94	95.923	ENSACIG00000024504	polr3a	97	95.923	Amphilophus_citrinellus
ENSPREG00000002385	polr3a	100	95.827	ENSAOCG00000002071	polr3a	100	95.827	Amphiprion_ocellaris
ENSPREG00000002385	polr3a	100	92.518	ENSAOCG00000003949	-	100	92.518	Amphiprion_ocellaris
ENSPREG00000002385	polr3a	100	95.612	ENSAPEG00000001966	-	100	95.612	Amphiprion_percula
ENSPREG00000002385	polr3a	100	95.827	ENSAPEG00000013351	polr3a	100	95.827	Amphiprion_percula
ENSPREG00000002385	polr3a	100	95.755	ENSATEG00000023277	polr3a	100	95.755	Anabas_testudineus
ENSPREG00000002385	polr3a	99	90.407	ENSAPLG00000015878	POLR3A	99	90.407	Anas_platyrhynchos
ENSPREG00000002385	polr3a	93	89.076	ENSACAG00000007985	POLR3A	99	89.076	Anolis_carolinensis
ENSPREG00000002385	polr3a	100	87.284	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSPREG00000002385	polr3a	100	95.540	ENSACLG00000005914	polr3a	100	95.540	Astatotilapia_calliptera
ENSPREG00000002385	polr3a	99	88.977	ENSAMXG00000018852	polr3a	99	88.977	Astyanax_mexicanus
ENSPREG00000002385	polr3a	100	89.856	ENSBTAG00000013259	POLR3A	100	89.856	Bos_taurus
ENSPREG00000002385	polr3a	98	56.999	WBGene00004411	rpc-1	99	56.999	Caenorhabditis_elegans
ENSPREG00000002385	polr3a	100	89.712	ENSCJAG00000001015	POLR3A	100	89.712	Callithrix_jacchus
ENSPREG00000002385	polr3a	100	89.928	ENSCAFG00000015546	POLR3A	100	89.928	Canis_familiaris
ENSPREG00000002385	polr3a	100	89.928	ENSCAFG00020014711	POLR3A	100	89.928	Canis_lupus_dingo
ENSPREG00000002385	polr3a	100	89.568	ENSCHIG00000000352	POLR3A	100	89.568	Capra_hircus
ENSPREG00000002385	polr3a	100	89.281	ENSTSYG00000006671	POLR3A	100	89.281	Carlito_syrichta
ENSPREG00000002385	polr3a	99	89.382	ENSCAPG00000016031	POLR3A	100	89.382	Cavia_aperea
ENSPREG00000002385	polr3a	100	89.424	ENSCPOG00000022387	POLR3A	100	89.424	Cavia_porcellus
ENSPREG00000002385	polr3a	100	88.129	ENSCCAG00000032995	POLR3A	96	92.405	Cebus_capucinus
ENSPREG00000002385	polr3a	100	89.856	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSPREG00000002385	polr3a	100	89.568	ENSCLAG00000009629	POLR3A	100	89.568	Chinchilla_lanigera
ENSPREG00000002385	polr3a	100	89.856	ENSCSAG00000009292	POLR3A	100	89.856	Chlorocebus_sabaeus
ENSPREG00000002385	polr3a	81	81.494	ENSCHOG00000008368	POLR3A	95	81.494	Choloepus_hoffmanni
ENSPREG00000002385	polr3a	99	90.353	ENSCPBG00000002079	POLR3A	99	90.353	Chrysemys_picta_bellii
ENSPREG00000002385	polr3a	99	69.092	ENSCSAVG00000009925	-	99	69.092	Ciona_savignyi
ENSPREG00000002385	polr3a	86	85.542	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSPREG00000002385	polr3a	78	90.205	ENSCGRG00001015599	-	92	90.205	Cricetulus_griseus_chok1gshd
ENSPREG00000002385	polr3a	88	88.856	ENSCGRG00000001019	Polr3a	100	88.856	Cricetulus_griseus_crigri
ENSPREG00000002385	polr3a	100	95.755	ENSCSEG00000016653	polr3a	100	95.755	Cynoglossus_semilaevis
ENSPREG00000002385	polr3a	100	97.338	ENSCVAG00000023049	polr3a	100	97.338	Cyprinodon_variegatus
ENSPREG00000002385	polr3a	99	91.787	ENSDARG00000102569	polr3a	99	91.787	Danio_rerio
ENSPREG00000002385	polr3a	100	88.921	ENSDNOG00000010194	POLR3A	100	88.921	Dasypus_novemcinctus
ENSPREG00000002385	polr3a	100	89.856	ENSDORG00000000184	Polr3a	100	89.856	Dipodomys_ordii
ENSPREG00000002385	polr3a	99	57.091	FBgn0030687	CG17209	99	57.091	Drosophila_melanogaster
ENSPREG00000002385	polr3a	88	88.664	ENSETEG00000007477	POLR3A	89	88.664	Echinops_telfairi
ENSPREG00000002385	polr3a	59	75.644	ENSEBUG00000013761	polr3a	98	75.644	Eptatretus_burgeri
ENSPREG00000002385	polr3a	100	89.784	ENSEASG00005023053	POLR3A	100	89.784	Equus_asinus_asinus
ENSPREG00000002385	polr3a	97	89.940	ENSECAG00000019416	POLR3A	100	89.642	Equus_caballus
ENSPREG00000002385	polr3a	96	85.309	ENSEEUG00000001774	POLR3A	100	85.309	Erinaceus_europaeus
ENSPREG00000002385	polr3a	100	90.668	ENSELUG00000014016	polr3a	100	90.668	Esox_lucius
ENSPREG00000002385	polr3a	100	90.072	ENSFCAG00000000843	POLR3A	100	90.072	Felis_catus
ENSPREG00000002385	polr3a	100	90.079	ENSFALG00000006913	POLR3A	100	90.079	Ficedula_albicollis
ENSPREG00000002385	polr3a	100	89.640	ENSFDAG00000007813	POLR3A	100	89.640	Fukomys_damarensis
ENSPREG00000002385	polr3a	95	96.711	ENSFHEG00000011922	polr3a	99	96.711	Fundulus_heteroclitus
ENSPREG00000002385	polr3a	100	87.438	ENSGMOG00000000291	polr3a	99	87.482	Gadus_morhua
ENSPREG00000002385	polr3a	100	90.504	ENSGALG00000004947	POLR3A	100	90.504	Gallus_gallus
ENSPREG00000002385	polr3a	100	98.993	ENSGAFG00000005112	polr3a	100	98.993	Gambusia_affinis
ENSPREG00000002385	polr3a	100	93.741	ENSGACG00000002304	polr3a	100	93.741	Gasterosteus_aculeatus
ENSPREG00000002385	polr3a	95	90.083	ENSGAGG00000010386	POLR3A	98	90.083	Gopherus_agassizii
ENSPREG00000002385	polr3a	99	88.970	ENSGGOG00000027729	POLR3A	100	90.979	Gorilla_gorilla
ENSPREG00000002385	polr3a	100	95.540	ENSHBUG00000018098	polr3a	100	95.540	Haplochromis_burtoni
ENSPREG00000002385	polr3a	100	89.568	ENSHGLG00000017899	POLR3A	100	89.568	Heterocephalus_glaber_female
ENSPREG00000002385	polr3a	100	89.568	ENSHGLG00100008483	POLR3A	100	89.568	Heterocephalus_glaber_male
ENSPREG00000002385	polr3a	100	94.029	ENSHCOG00000001075	polr3a	100	94.029	Hippocampus_comes
ENSPREG00000002385	polr3a	100	89.856	ENSSTOG00000012983	POLR3A	100	89.856	Ictidomys_tridecemlineatus
ENSPREG00000002385	polr3a	100	95.683	ENSKMAG00000015290	polr3a	100	95.683	Kryptolebias_marmoratus
ENSPREG00000002385	polr3a	99	93.737	ENSLBEG00000017214	polr3a	99	93.737	Labrus_bergylta
ENSPREG00000002385	polr3a	97	88.104	ENSLACG00000018557	POLR3A	99	88.104	Latimeria_chalumnae
ENSPREG00000002385	polr3a	100	91.816	ENSLOCG00000004942	polr3a	100	91.816	Lepisosteus_oculatus
ENSPREG00000002385	polr3a	100	88.497	ENSLAFG00000016719	POLR3A	100	88.497	Loxodonta_africana
ENSPREG00000002385	polr3a	100	89.784	ENSMFAG00000032218	POLR3A	100	89.784	Macaca_fascicularis
ENSPREG00000002385	polr3a	100	89.784	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSPREG00000002385	polr3a	99	83.776	ENSMNEG00000035163	POLR3A	99	89.591	Macaca_nemestrina
ENSPREG00000002385	polr3a	100	86.115	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSPREG00000002385	polr3a	100	95.468	ENSMAMG00000017497	polr3a	100	95.468	Mastacembelus_armatus
ENSPREG00000002385	polr3a	100	95.540	ENSMZEG00005000576	polr3a	100	95.540	Maylandia_zebra
ENSPREG00000002385	polr3a	100	73.509	ENSMGAG00000005713	-	100	73.509	Meleagris_gallopavo
ENSPREG00000002385	polr3a	100	87.554	ENSMAUG00000016247	Polr3a	100	87.554	Mesocricetus_auratus
ENSPREG00000002385	polr3a	100	89.856	ENSMICG00000005937	POLR3A	100	90.964	Microcebus_murinus
ENSPREG00000002385	polr3a	100	89.856	ENSMOCG00000012185	Polr3a	100	89.856	Microtus_ochrogaster
ENSPREG00000002385	polr3a	100	94.317	ENSMMOG00000013822	polr3a	100	94.317	Mola_mola
ENSPREG00000002385	polr3a	100	89.209	ENSMODG00000001036	POLR3A	100	89.209	Monodelphis_domestica
ENSPREG00000002385	polr3a	100	95.036	ENSMALG00000001249	polr3a	100	95.036	Monopterus_albus
ENSPREG00000002385	polr3a	100	89.640	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.640	Mus_caroli
ENSPREG00000002385	polr3a	100	89.712	ENSMUSG00000025280	Polr3a	100	89.712	Mus_musculus
ENSPREG00000002385	polr3a	100	89.640	MGP_PahariEiJ_G0030029	Polr3a	100	89.640	Mus_pahari
ENSPREG00000002385	polr3a	100	87.050	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSPREG00000002385	polr3a	100	89.301	ENSMPUG00000003790	POLR3A	100	89.301	Mustela_putorius_furo
ENSPREG00000002385	polr3a	100	88.705	ENSMLUG00000011522	POLR3A	100	88.705	Myotis_lucifugus
ENSPREG00000002385	polr3a	100	88.345	ENSNGAG00000015863	Polr3a	100	88.345	Nannospalax_galili
ENSPREG00000002385	polr3a	100	93.309	ENSNBRG00000014262	polr3a	100	93.309	Neolamprologus_brichardi
ENSPREG00000002385	polr3a	89	82.932	ENSNLEG00000010501	POLR3A	93	82.932	Nomascus_leucogenys
ENSPREG00000002385	polr3a	99	76.655	ENSMEUG00000012446	POLR3A	100	76.655	Notamacropus_eugenii
ENSPREG00000002385	polr3a	100	85.108	ENSOPRG00000001880	-	100	85.108	Ochotona_princeps
ENSPREG00000002385	polr3a	100	89.209	ENSODEG00000015146	POLR3A	100	89.209	Octodon_degus
ENSPREG00000002385	polr3a	100	95.971	ENSONIG00000016129	polr3a	100	95.971	Oreochromis_niloticus
ENSPREG00000002385	polr3a	98	88.970	ENSOANG00000007013	POLR3A	100	88.970	Ornithorhynchus_anatinus
ENSPREG00000002385	polr3a	100	89.496	ENSOCUG00000012450	POLR3A	100	89.496	Oryctolagus_cuniculus
ENSPREG00000002385	polr3a	100	95.612	ENSORLG00000008958	polr3a	100	95.612	Oryzias_latipes
ENSPREG00000002385	polr3a	100	93.309	ENSORLG00020007525	polr3a	98	95.678	Oryzias_latipes_hni
ENSPREG00000002385	polr3a	100	95.612	ENSORLG00015006633	polr3a	100	95.612	Oryzias_latipes_hsok
ENSPREG00000002385	polr3a	100	94.964	ENSOMEG00000012865	polr3a	100	94.964	Oryzias_melastigma
ENSPREG00000002385	polr3a	100	89.640	ENSOGAG00000010995	POLR3A	100	89.640	Otolemur_garnettii
ENSPREG00000002385	polr3a	100	89.511	ENSOARG00000009656	POLR3A	100	89.511	Ovis_aries
ENSPREG00000002385	polr3a	100	90.072	ENSPPRG00000002128	POLR3A	100	90.072	Panthera_pardus
ENSPREG00000002385	polr3a	100	90.072	ENSPTIG00000020916	POLR3A	100	90.072	Panthera_tigris_altaica
ENSPREG00000002385	polr3a	100	89.928	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSPREG00000002385	polr3a	100	89.784	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSPREG00000002385	polr3a	100	92.302	ENSPKIG00000008140	polr3a	100	92.619	Paramormyrops_kingsleyae
ENSPREG00000002385	polr3a	98	89.993	ENSPSIG00000002092	POLR3A	100	89.993	Pelodiscus_sinensis
ENSPREG00000002385	polr3a	100	89.496	ENSPEMG00000006768	Polr3a	100	89.496	Peromyscus_maniculatus_bairdii
ENSPREG00000002385	polr3a	100	89.137	ENSPCIG00000015842	POLR3A	100	89.137	Phascolarctos_cinereus
ENSPREG00000002385	polr3a	54	99.195	ENSPFOG00000006458	polr3a	100	99.195	Poecilia_formosa
ENSPREG00000002385	polr3a	100	99.281	ENSPLAG00000000997	polr3a	100	99.281	Poecilia_latipinna
ENSPREG00000002385	polr3a	100	99.209	ENSPMEG00000006821	polr3a	100	99.209	Poecilia_mexicana
ENSPREG00000002385	polr3a	93	89.698	ENSPPYG00000002305	POLR3A	99	89.698	Pongo_abelii
ENSPREG00000002385	polr3a	79	87.417	ENSPCAG00000005690	POLR3A	82	87.417	Procavia_capensis
ENSPREG00000002385	polr3a	100	89.712	ENSPCOG00000028311	POLR3A	100	89.712	Propithecus_coquereli
ENSPREG00000002385	polr3a	100	88.345	ENSPVAG00000015553	POLR3A	100	88.345	Pteropus_vampyrus
ENSPREG00000002385	polr3a	100	95.612	ENSPNYG00000020987	polr3a	100	95.612	Pundamilia_nyererei
ENSPREG00000002385	polr3a	99	87.824	ENSPNAG00000006629	polr3a	99	87.824	Pygocentrus_nattereri
ENSPREG00000002385	polr3a	100	89.712	ENSRNOG00000010008	Polr3a	100	89.712	Rattus_norvegicus
ENSPREG00000002385	polr3a	100	86.259	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSPREG00000002385	polr3a	100	89.784	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSPREG00000002385	polr3a	98	50.173	YOR116C	RPO31	98	50.489	Saccharomyces_cerevisiae
ENSPREG00000002385	polr3a	100	89.784	ENSSBOG00000022199	POLR3A	100	89.784	Saimiri_boliviensis_boliviensis
ENSPREG00000002385	polr3a	100	89.065	ENSSHAG00000007588	POLR3A	94	89.065	Sarcophilus_harrisii
ENSPREG00000002385	polr3a	100	92.878	ENSSFOG00015014357	polr3a	100	92.878	Scleropages_formosus
ENSPREG00000002385	polr3a	100	95.252	ENSSMAG00000001780	polr3a	100	95.252	Scophthalmus_maximus
ENSPREG00000002385	polr3a	100	96.187	ENSSDUG00000019840	polr3a	100	96.187	Seriola_dumerili
ENSPREG00000002385	polr3a	100	96.043	ENSSLDG00000023908	polr3a	100	96.043	Seriola_lalandi_dorsalis
ENSPREG00000002385	polr3a	69	90.282	ENSSARG00000009916	POLR3A	89	90.282	Sorex_araneus
ENSPREG00000002385	polr3a	100	88.273	ENSSPUG00000013209	POLR3A	100	88.273	Sphenodon_punctatus
ENSPREG00000002385	polr3a	100	95.971	ENSSPAG00000017712	polr3a	100	95.971	Stegastes_partitus
ENSPREG00000002385	polr3a	100	89.640	ENSSSCG00000010327	POLR3A	100	89.640	Sus_scrofa
ENSPREG00000002385	polr3a	100	90.072	ENSTGUG00000006423	-	100	90.072	Taeniopygia_guttata
ENSPREG00000002385	polr3a	100	94.460	ENSTRUG00000013488	polr3a	100	94.460	Takifugu_rubripes
ENSPREG00000002385	polr3a	100	94.540	ENSTNIG00000013151	polr3a	100	94.540	Tetraodon_nigroviridis
ENSPREG00000002385	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSPREG00000002385	polr3a	100	83.453	ENSTTRG00000007817	POLR3A	100	83.453	Tursiops_truncatus
ENSPREG00000002385	polr3a	100	87.626	ENSUAMG00000011283	POLR3A	100	87.626	Ursus_americanus
ENSPREG00000002385	polr3a	100	89.928	ENSUMAG00000013913	POLR3A	100	89.928	Ursus_maritimus
ENSPREG00000002385	polr3a	99	81.891	ENSVPAG00000003285	POLR3A	100	81.891	Vicugna_pacos
ENSPREG00000002385	polr3a	100	89.928	ENSVVUG00000025523	POLR3A	100	89.928	Vulpes_vulpes
ENSPREG00000002385	polr3a	86	90.393	ENSXETG00000018101	polr3a	100	90.393	Xenopus_tropicalis
ENSPREG00000002385	polr3a	100	99.209	ENSXMAG00000015213	polr3a	100	99.209	Xiphophorus_maculatus