EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108166474
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 948 bases
Position: chrLG8:12368849-12369796
Accession: 108166474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003295	RRM_1	PF00076.22	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003349	-	474	XM_017306119	ENSPREP00000003295	157 (aa)	XP_017161608	-

Gene Model

Click here to download ENSPREG00000002388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002388	-	65	70.588	ENSPREG00000002361	-	97	70.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002388	-	68	65.094	ENSCVAG00000011435	-	92	65.094	Cyprinodon_variegatus
ENSPREG00000002388	-	71	67.857	ENSGAFG00000006970	-	96	70.476	Gambusia_affinis
ENSPREG00000002388	-	53	89.157	ENSGAFG00000006965	-	82	89.157	Gambusia_affinis
ENSPREG00000002388	-	76	66.667	ENSPFOG00000021959	-	90	66.667	Poecilia_formosa
ENSPREG00000002388	-	71	80.870	ENSPFOG00000022708	-	85	80.870	Poecilia_formosa
ENSPREG00000002388	-	67	69.524	ENSPLAG00000013538	-	89	69.524	Poecilia_latipinna
ENSPREG00000002388	-	97	73.203	ENSPLAG00000023759	-	100	73.203	Poecilia_latipinna
ENSPREG00000002388	-	95	67.114	ENSPMEG00000014948	-	95	67.114	Poecilia_mexicana
ENSPREG00000002388	-	100	89.172	ENSPMEG00000014957	-	100	89.172	Poecilia_mexicana
ENSPREG00000002388	-	68	83.019	ENSXCOG00000015682	-	83	83.019	Xiphophorus_couchianus
ENSPREG00000002388	-	73	69.298	ENSXCOG00000010506	-	96	69.298	Xiphophorus_couchianus
ENSPREG00000002388	-	64	83.168	ENSXMAG00000027771	-	99	83.168	Xiphophorus_maculatus
ENSPREG00000002388	-	100	84.076	ENSXMAG00000022455	-	100	84.076	Xiphophorus_maculatus
ENSPREG00000002388	-	73	69.298	ENSXMAG00000027824	-	96	69.298	Xiphophorus_maculatus
ENSPREG00000002388	-	68	83.962	ENSXMAG00000026326	-	78	83.962	Xiphophorus_maculatus
ENSPREG00000002388	-	68	83.962	ENSXMAG00000022673	-	78	83.962	Xiphophorus_maculatus