EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002440 (Gene tree)
Gene ID: 103464585
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7852 bases
Position: chrLG5:3748074-3755925
Accession: 103464585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003391	zf-C2H2	PF00096.26	7.9e-31	1	4
ENSPREP00000003391	zf-C2H2	PF00096.26	7.9e-31	2	4
ENSPREP00000003391	zf-C2H2	PF00096.26	7.9e-31	3	4
ENSPREP00000003391	zf-C2H2	PF00096.26	7.9e-31	4	4
ENSPREP00000003391	zf-met	PF12874.7	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003445	-	2067	XM_008408785	ENSPREP00000003391	688 (aa)	XP_008407007	-

Gene Model

Click here to download ENSPREG00000002440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002440	patz1	56	31.698	ENSPREG00000002664	-	81	31.698
ENSPREG00000002440	patz1	54	32.105	ENSPREG00000000467	-	50	34.524
ENSPREG00000002440	patz1	55	34.783	ENSPREG00000010666	zbtb16b	56	34.783
ENSPREG00000002440	patz1	58	36.747	ENSPREG00000015342	-	71	36.747
ENSPREG00000002440	patz1	55	32.549	ENSPREG00000002681	-	72	38.462
ENSPREG00000002440	patz1	62	39.759	ENSPREG00000013476	-	99	34.375
ENSPREG00000002440	patz1	52	38.889	ENSPREG00000019990	-	68	38.889
ENSPREG00000002440	patz1	60	30.405	ENSPREG00000003393	-	76	37.989
ENSPREG00000002440	patz1	62	32.830	ENSPREG00000001441	-	92	32.453
ENSPREG00000002440	patz1	52	32.143	ENSPREG00000000451	-	76	32.143
ENSPREG00000002440	patz1	61	38.378	ENSPREG00000014127	-	55	38.378
ENSPREG00000002440	patz1	61	33.197	ENSPREG00000003614	-	98	35.915
ENSPREG00000002440	patz1	57	32.828	ENSPREG00000003555	-	96	31.641
ENSPREG00000002440	patz1	56	30.584	ENSPREG00000012539	-	65	38.095
ENSPREG00000002440	patz1	51	35.115	ENSPREG00000010261	zbtb17	63	34.682
ENSPREG00000002440	patz1	53	30.556	ENSPREG00000004728	-	65	36.158
ENSPREG00000002440	patz1	56	33.498	ENSPREG00000020014	-	90	34.016
ENSPREG00000002440	patz1	55	33.796	ENSPREG00000013699	-	62	31.557
ENSPREG00000002440	patz1	53	37.671	ENSPREG00000016308	-	67	37.671
ENSPREG00000002440	patz1	72	33.636	ENSPREG00000007006	bcl6ab	93	33.636
ENSPREG00000002440	patz1	53	37.288	ENSPREG00000000364	-	69	37.288
ENSPREG00000002440	patz1	54	32.567	ENSPREG00000018366	prdm5	73	32.184
ENSPREG00000002440	patz1	53	36.145	ENSPREG00000004571	-	85	36.145
ENSPREG00000002440	patz1	54	34.500	ENSPREG00000015081	-	88	32.927
ENSPREG00000002440	patz1	51	32.773	ENSPREG00000010443	hic2	52	41.237
ENSPREG00000002440	patz1	53	32.258	ENSPREG00000000733	-	88	32.258
ENSPREG00000002440	patz1	61	30.418	ENSPREG00000002181	-	79	36.905
ENSPREG00000002440	patz1	59	30.612	ENSPREG00000016643	zbtb24	66	30.612
ENSPREG00000002440	patz1	53	47.059	ENSPREG00000008826	-	87	47.059
ENSPREG00000002440	patz1	62	30.882	ENSPREG00000021537	-	72	31.690
ENSPREG00000002440	patz1	67	31.518	ENSPREG00000002715	-	80	36.145
ENSPREG00000002440	patz1	59	30.986	ENSPREG00000016129	-	88	30.986
ENSPREG00000002440	patz1	53	32.258	ENSPREG00000004745	-	69	37.209
ENSPREG00000002440	patz1	58	39.130	ENSPREG00000002615	-	55	39.130
ENSPREG00000002440	patz1	57	34.545	ENSPREG00000004839	-	87	37.805
ENSPREG00000002440	patz1	53	36.111	ENSPREG00000013719	-	70	36.111
ENSPREG00000002440	patz1	53	32.927	ENSPREG00000002696	-	75	32.927
ENSPREG00000002440	patz1	56	32.530	ENSPREG00000014360	-	63	32.932
ENSPREG00000002440	patz1	62	33.858	ENSPREG00000014366	-	81	33.071
ENSPREG00000002440	patz1	56	33.721	ENSPREG00000017631	znf668	89	30.159
ENSPREG00000002440	patz1	54	30.804	ENSPREG00000013965	-	92	31.280
ENSPREG00000002440	patz1	56	36.316	ENSPREG00000014477	-	92	37.363
ENSPREG00000002440	patz1	63	31.034	ENSPREG00000003193	-	99	31.034
ENSPREG00000002440	patz1	55	38.547	ENSPREG00000014945	-	98	38.547
ENSPREG00000002440	patz1	64	32.420	ENSPREG00000002642	-	100	32.420
ENSPREG00000002440	patz1	61	37.349	ENSPREG00000011741	-	93	37.195
ENSPREG00000002440	patz1	72	31.933	ENSPREG00000015369	zbtb16a	58	31.933
ENSPREG00000002440	patz1	54	37.870	ENSPREG00000005144	-	98	33.679
ENSPREG00000002440	patz1	54	32.990	ENSPREG00000002637	-	65	31.443
ENSPREG00000002440	patz1	54	32.609	ENSPREG00000016220	-	69	35.329
ENSPREG00000002440	patz1	56	30.612	ENSPREG00000006537	-	93	30.435
ENSPREG00000002440	patz1	60	31.985	ENSPREG00000015017	-	93	38.202
ENSPREG00000002440	patz1	53	32.632	ENSPREG00000000449	-	65	35.484
ENSPREG00000002440	patz1	58	32.804	ENSPREG00000013780	-	98	35.260
ENSPREG00000002440	patz1	66	33.019	ENSPREG00000014028	-	94	35.976
ENSPREG00000002440	patz1	57	30.153	ENSPREG00000014340	-	70	31.148
ENSPREG00000002440	patz1	56	34.194	ENSPREG00000014348	-	53	40.000
ENSPREG00000002440	patz1	60	35.714	ENSPREG00000003894	-	85	33.600
ENSPREG00000002440	patz1	51	33.163	ENSPREG00000016270	-	77	32.692
ENSPREG00000002440	patz1	60	35.119	ENSPREG00000004672	-	84	34.337
ENSPREG00000002440	patz1	61	36.145	ENSPREG00000015286	-	90	34.831
ENSPREG00000002440	patz1	56	32.482	ENSPREG00000019972	-	99	32.746
ENSPREG00000002440	patz1	56	34.387	ENSPREG00000004036	-	85	34.221
ENSPREG00000002440	patz1	56	33.077	ENSPREG00000014800	-	94	32.806
ENSPREG00000002440	patz1	59	33.333	ENSPREG00000011439	-	93	35.976
ENSPREG00000002440	patz1	54	30.924	ENSPREG00000003217	-	78	31.801
ENSPREG00000002440	patz1	57	36.522	ENSPREG00000019161	-	92	36.522
ENSPREG00000002440	patz1	64	30.742	ENSPREG00000012132	-	94	33.333
ENSPREG00000002440	patz1	59	38.323	ENSPREG00000016204	-	64	38.323
ENSPREG00000002440	patz1	54	31.081	ENSPREG00000001101	znf319b	79	30.317
ENSPREG00000002440	patz1	54	31.000	ENSPREG00000013107	-	61	31.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002440	patz1	100	57.182	ENSG00000100105	PATZ1	100	57.044	Homo_sapiens
ENSPREG00000002440	patz1	98	90.097	ENSAPOG00000018447	patz1	100	90.097	Acanthochromis_polyacanthus
ENSPREG00000002440	patz1	100	57.103	ENSAMEG00000007074	PATZ1	100	56.906	Ailuropoda_melanoleuca
ENSPREG00000002440	patz1	100	79.340	ENSACIG00000016779	patz1	100	79.340	Amphilophus_citrinellus
ENSPREG00000002440	patz1	100	85.530	ENSAPEG00000013354	patz1	100	85.286	Amphiprion_percula
ENSPREG00000002440	patz1	98	86.990	ENSATEG00000011260	patz1	100	79.340	Anabas_testudineus
ENSPREG00000002440	patz1	88	56.522	ENSAPLG00000003934	PATZ1	99	56.913	Anas_platyrhynchos
ENSPREG00000002440	patz1	100	57.182	ENSANAG00000029603	PATZ1	100	57.044	Aotus_nancymaae
ENSPREG00000002440	patz1	100	59.754	ENSAMXG00000002273	patz1	100	59.618	Astyanax_mexicanus
ENSPREG00000002440	patz1	100	57.044	ENSBTAG00000005478	PATZ1	100	56.906	Bos_taurus
ENSPREG00000002440	patz1	100	57.182	ENSCJAG00000010978	PATZ1	100	57.044	Callithrix_jacchus
ENSPREG00000002440	patz1	100	57.044	ENSCAFG00000013087	PATZ1	100	56.906	Canis_familiaris
ENSPREG00000002440	patz1	100	57.044	ENSCHIG00000020203	PATZ1	100	56.906	Capra_hircus
ENSPREG00000002440	patz1	100	57.182	ENSTSYG00000033183	PATZ1	100	57.044	Carlito_syrichta
ENSPREG00000002440	patz1	100	57.182	ENSCCAG00000028772	PATZ1	100	57.044	Cebus_capucinus
ENSPREG00000002440	patz1	100	57.182	ENSCATG00000006101	PATZ1	100	57.044	Cercocebus_atys
ENSPREG00000002440	patz1	100	56.474	ENSCPBG00000011277	PATZ1	100	57.221	Chrysemys_picta_bellii
ENSPREG00000002440	patz1	100	57.182	ENSCANG00000024972	PATZ1	100	57.044	Colobus_angolensis_palliatus
ENSPREG00000002440	patz1	100	55.801	ENSCGRG00001004071	Patz1	100	56.138	Cricetulus_griseus_chok1gshd
ENSPREG00000002440	patz1	93	55.882	ENSCGRG00000004814	Patz1	100	56.241	Cricetulus_griseus_crigri
ENSPREG00000002440	patz1	100	76.724	ENSCSEG00000001385	patz1	100	76.724	Cynoglossus_semilaevis
ENSPREG00000002440	patz1	100	85.797	ENSCVAG00000007684	patz1	100	85.797	Cyprinodon_variegatus
ENSPREG00000002440	patz1	100	63.075	ENSDARG00000076584	patz1	100	62.446	Danio_rerio
ENSPREG00000002440	patz1	89	56.375	ENSDNOG00000003183	PATZ1	100	56.221	Dasypus_novemcinctus
ENSPREG00000002440	patz1	100	57.182	ENSDORG00000023834	Patz1	100	57.044	Dipodomys_ordii
ENSPREG00000002440	patz1	100	57.182	ENSECAG00000025030	PATZ1	100	57.044	Equus_caballus
ENSPREG00000002440	patz1	98	76.482	ENSELUG00000002333	patz1	100	67.917	Esox_lucius
ENSPREG00000002440	patz1	100	57.044	ENSFCAG00000030253	PATZ1	100	56.906	Felis_catus
ENSPREG00000002440	patz1	89	56.619	ENSFALG00000007450	PATZ1	100	57.006	Ficedula_albicollis
ENSPREG00000002440	patz1	97	54.011	ENSFDAG00000005614	PATZ1	100	54.011	Fukomys_damarensis
ENSPREG00000002440	patz1	100	85.652	ENSFHEG00000014755	patz1	100	85.652	Fundulus_heteroclitus
ENSPREG00000002440	patz1	100	70.100	ENSGMOG00000001062	patz1	100	70.213	Gadus_morhua
ENSPREG00000002440	patz1	100	56.148	ENSGALG00000006934	PATZ1	100	56.889	Gallus_gallus
ENSPREG00000002440	patz1	100	92.587	ENSGAFG00000010053	patz1	100	92.587	Gambusia_affinis
ENSPREG00000002440	patz1	88	56.935	ENSGAGG00000003214	PATZ1	100	57.327	Gopherus_agassizii
ENSPREG00000002440	patz1	100	57.182	ENSGGOG00000017171	PATZ1	100	57.044	Gorilla_gorilla
ENSPREG00000002440	patz1	100	73.669	ENSHCOG00000017644	patz1	93	73.094	Hippocampus_comes
ENSPREG00000002440	patz1	100	61.711	ENSIPUG00000017653	patz1	99	61.538	Ictalurus_punctatus
ENSPREG00000002440	patz1	100	56.790	ENSSTOG00000020707	PATZ1	100	56.906	Ictidomys_tridecemlineatus
ENSPREG00000002440	patz1	100	56.787	ENSJJAG00000015259	Patz1	99	57.644	Jaculus_jaculus
ENSPREG00000002440	patz1	100	79.251	ENSKMAG00000008157	patz1	100	79.281	Kryptolebias_marmoratus
ENSPREG00000002440	patz1	100	58.228	ENSLAFG00000002317	PATZ1	100	58.087	Loxodonta_africana
ENSPREG00000002440	patz1	100	57.182	ENSMFAG00000040968	PATZ1	100	57.044	Macaca_fascicularis
ENSPREG00000002440	patz1	100	57.182	ENSMNEG00000037588	PATZ1	100	57.044	Macaca_nemestrina
ENSPREG00000002440	patz1	100	57.182	ENSMLEG00000030938	PATZ1	100	57.044	Mandrillus_leucophaeus
ENSPREG00000002440	patz1	100	82.982	ENSMAMG00000023652	patz1	100	82.982	Mastacembelus_armatus
ENSPREG00000002440	patz1	88	54.019	ENSMGAG00000008439	PATZ1	100	54.414	Meleagris_gallopavo
ENSPREG00000002440	patz1	100	57.182	ENSMAUG00000004129	Patz1	100	57.517	Mesocricetus_auratus
ENSPREG00000002440	patz1	100	57.044	ENSMICG00000005430	PATZ1	100	56.906	Microcebus_murinus
ENSPREG00000002440	patz1	100	57.182	ENSMOCG00000014488	Patz1	100	57.182	Microtus_ochrogaster
ENSPREG00000002440	patz1	100	64.921	ENSMMOG00000021679	patz1	64	77.476	Mola_mola
ENSPREG00000002440	patz1	100	80.086	ENSMALG00000021172	patz1	100	80.086	Monopterus_albus
ENSPREG00000002440	patz1	100	57.320	MGP_CAROLIEiJ_G0016007	Patz1	100	57.320	Mus_caroli
ENSPREG00000002440	patz1	100	57.320	ENSMUSG00000020453	Patz1	100	57.320	Mus_musculus
ENSPREG00000002440	patz1	100	57.320	MGP_PahariEiJ_G0016884	Patz1	100	57.320	Mus_pahari
ENSPREG00000002440	patz1	100	57.320	MGP_SPRETEiJ_G0016846	Patz1	100	57.320	Mus_spretus
ENSPREG00000002440	patz1	100	57.044	ENSMLUG00000009942	PATZ1	100	56.906	Myotis_lucifugus
ENSPREG00000002440	patz1	100	57.044	ENSNGAG00000010268	Patz1	100	57.044	Nannospalax_galili
ENSPREG00000002440	patz1	100	82.665	ENSNBRG00000016032	patz1	100	82.665	Neolamprologus_brichardi
ENSPREG00000002440	patz1	70	56.162	ENSMEUG00000016293	PATZ1	100	56.768	Notamacropus_eugenii
ENSPREG00000002440	patz1	100	56.768	ENSODEG00000003589	PATZ1	100	56.630	Octodon_degus
ENSPREG00000002440	patz1	100	82.421	ENSONIG00000004248	patz1	100	82.421	Oreochromis_niloticus
ENSPREG00000002440	patz1	100	57.420	ENSOANG00000014654	PATZ1	100	58.033	Ornithorhynchus_anatinus
ENSPREG00000002440	patz1	100	84.818	ENSORLG00020010937	patz1	100	80.142	Oryzias_latipes_hni
ENSPREG00000002440	patz1	100	81.250	ENSORLG00015007396	patz1	100	80.540	Oryzias_latipes_hsok
ENSPREG00000002440	patz1	100	80.814	ENSOMEG00000006636	patz1	100	79.942	Oryzias_melastigma
ENSPREG00000002440	patz1	100	57.182	ENSOGAG00000027905	PATZ1	100	57.044	Otolemur_garnettii
ENSPREG00000002440	patz1	100	57.182	ENSPPAG00000033227	PATZ1	100	57.044	Pan_paniscus
ENSPREG00000002440	patz1	100	57.044	ENSPPRG00000001573	PATZ1	100	56.906	Panthera_pardus
ENSPREG00000002440	patz1	89	57.051	ENSPTIG00000007937	PATZ1	91	56.847	Panthera_tigris_altaica
ENSPREG00000002440	patz1	100	57.182	ENSPTRG00000014268	PATZ1	100	57.044	Pan_troglodytes
ENSPREG00000002440	patz1	100	57.182	ENSPANG00000006821	PATZ1	100	57.044	Papio_anubis
ENSPREG00000002440	patz1	100	69.550	ENSPKIG00000019584	patz1	100	67.373	Paramormyrops_kingsleyae
ENSPREG00000002440	patz1	57	58.145	ENSPSIG00000016553	-	85	58.750	Pelodiscus_sinensis
ENSPREG00000002440	patz1	61	60.748	ENSPSIG00000011562	-	100	61.305	Pelodiscus_sinensis
ENSPREG00000002440	patz1	100	76.812	ENSPMGG00000010196	patz1	100	76.156	Periophthalmus_magnuspinnatus
ENSPREG00000002440	patz1	100	57.320	ENSPEMG00000005321	Patz1	100	57.182	Peromyscus_maniculatus_bairdii
ENSPREG00000002440	patz1	100	92.743	ENSPLAG00000010425	patz1	100	93.081	Poecilia_latipinna
ENSPREG00000002440	patz1	100	92.878	ENSPMEG00000000255	patz1	100	92.878	Poecilia_mexicana
ENSPREG00000002440	patz1	100	57.182	ENSPPYG00000011732	PATZ1	100	57.044	Pongo_abelii
ENSPREG00000002440	patz1	100	57.044	ENSPCOG00000019729	PATZ1	100	56.906	Propithecus_coquereli
ENSPREG00000002440	patz1	100	57.044	ENSPVAG00000001749	PATZ1	100	56.906	Pteropus_vampyrus
ENSPREG00000002440	patz1	100	84.670	ENSPNYG00000013542	patz1	100	84.241	Pundamilia_nyererei
ENSPREG00000002440	patz1	88	62.205	ENSPNAG00000017222	patz1	100	62.500	Pygocentrus_nattereri
ENSPREG00000002440	patz1	100	57.182	ENSRBIG00000044231	PATZ1	100	57.044	Rhinopithecus_bieti
ENSPREG00000002440	patz1	100	57.182	ENSRROG00000037155	PATZ1	100	57.044	Rhinopithecus_roxellana
ENSPREG00000002440	patz1	100	57.182	ENSSBOG00000003894	PATZ1	100	57.044	Saimiri_boliviensis_boliviensis
ENSPREG00000002440	patz1	62	89.855	ENSSFOG00015013244	patz1	78	89.855	Scleropages_formosus
ENSPREG00000002440	patz1	99	56.128	ENSSPUG00000015298	PATZ1	97	56.885	Sphenodon_punctatus
ENSPREG00000002440	patz1	88	56.866	ENSSSCG00000010027	PATZ1	100	56.704	Sus_scrofa
ENSPREG00000002440	patz1	100	81.740	ENSTRUG00000015366	patz1	100	81.312	Takifugu_rubripes
ENSPREG00000002440	patz1	100	56.906	ENSTTRG00000010279	PATZ1	100	56.768	Tursiops_truncatus
ENSPREG00000002440	patz1	100	54.583	ENSUAMG00000015014	PATZ1	100	54.444	Ursus_americanus
ENSPREG00000002440	patz1	100	55.207	ENSXETG00000004190	patz1	100	56.429	Xenopus_tropicalis
ENSPREG00000002440	patz1	100	92.587	ENSXMAG00000015531	patz1	100	92.587	Xiphophorus_maculatus