EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002549 (Gene tree)
Gene ID: 103464581
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2611 bases
Position: chrLG5:3797131-3799741
Accession: 103464581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000003557	TruB_N	PF01509.18	4.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000003612	-	1017	XM_008408778	ENSPREP00000003557	338 (aa)	XP_008407000	UPI0004A2242A

Gene Model

Click here to download ENSPREG00000002549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002549	trub2	59	34.500	ENSPREG00000003343	trub1	71	34.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002549	trub2	82	54.676	ENSG00000167112	TRUB2	84	54.676	Homo_sapiens
ENSPREG00000002549	trub2	52	67.778	ENSAPOG00000018216	-	85	67.222	Acanthochromis_polyacanthus
ENSPREG00000002549	trub2	73	72.764	ENSAPOG00000015733	trub2	88	72.358	Acanthochromis_polyacanthus
ENSPREG00000002549	trub2	76	72.093	ENSAPOG00000018284	-	94	71.512	Acanthochromis_polyacanthus
ENSPREG00000002549	trub2	85	55.017	ENSAMEG00000015395	TRUB2	85	55.986	Ailuropoda_melanoleuca
ENSPREG00000002549	trub2	97	71.865	ENSACIG00000016500	trub2	98	71.865	Amphilophus_citrinellus
ENSPREG00000002549	trub2	99	71.131	ENSAOCG00000002330	trub2	98	70.833	Amphiprion_ocellaris
ENSPREG00000002549	trub2	99	71.131	ENSAPEG00000013177	trub2	98	70.833	Amphiprion_percula
ENSPREG00000002549	trub2	87	72.635	ENSATEG00000011371	trub2	91	73.611	Anabas_testudineus
ENSPREG00000002549	trub2	86	49.485	ENSAPLG00000009254	TRUB2	89	51.636	Anas_platyrhynchos
ENSPREG00000002549	trub2	87	51.701	ENSACAG00000007331	TRUB2	85	53.025	Anolis_carolinensis
ENSPREG00000002549	trub2	90	51.815	ENSANAG00000036234	TRUB2	89	55.036	Aotus_nancymaae
ENSPREG00000002549	trub2	97	72.171	ENSACLG00000010793	trub2	98	72.171	Astatotilapia_calliptera
ENSPREG00000002549	trub2	89	60.927	ENSAMXG00000031679	trub2	82	62.847	Astyanax_mexicanus
ENSPREG00000002549	trub2	82	54.317	ENSCJAG00000020009	TRUB2	84	54.317	Callithrix_jacchus
ENSPREG00000002549	trub2	87	51.987	ENSCAFG00000020068	TRUB2	84	54.643	Canis_familiaris
ENSPREG00000002549	trub2	50	52.907	ENSCAFG00020017325	-	95	52.907	Canis_lupus_dingo
ENSPREG00000002549	trub2	84	53.873	ENSCHIG00000021160	TRUB2	84	54.839	Capra_hircus
ENSPREG00000002549	trub2	82	55.516	ENSTSYG00000034163	TRUB2	84	55.000	Carlito_syrichta
ENSPREG00000002549	trub2	81	49.643	ENSCAPG00000000223	TRUB2	89	48.571	Cavia_aperea
ENSPREG00000002549	trub2	93	50.625	ENSCPOG00000013535	TRUB2	91	50.556	Cavia_porcellus
ENSPREG00000002549	trub2	85	53.472	ENSCCAG00000026531	-	87	53.472	Cebus_capucinus
ENSPREG00000002549	trub2	83	50.890	ENSCCAG00000028463	-	85	50.890	Cebus_capucinus
ENSPREG00000002549	trub2	90	52.131	ENSCATG00000038234	TRUB2	92	52.131	Cercocebus_atys
ENSPREG00000002549	trub2	87	52.013	ENSCLAG00000001702	TRUB2	87	52.353	Chinchilla_lanigera
ENSPREG00000002549	trub2	90	49.515	ENSCSAG00000014117	TRUB2	92	49.515	Chlorocebus_sabaeus
ENSPREG00000002549	trub2	84	52.650	ENSCHOG00000001555	TRUB2	84	53.597	Choloepus_hoffmanni
ENSPREG00000002549	trub2	82	56.475	ENSCPBG00000025186	TRUB2	81	56.475	Chrysemys_picta_bellii
ENSPREG00000002549	trub2	78	34.586	ENSCSAVG00000003930	-	81	34.586	Ciona_savignyi
ENSPREG00000002549	trub2	82	49.640	ENSCANG00000016135	TRUB2	82	49.640	Colobus_angolensis_palliatus
ENSPREG00000002549	trub2	84	50.883	ENSCGRG00001024441	Trub2	91	48.235	Cricetulus_griseus_chok1gshd
ENSPREG00000002549	trub2	84	50.883	ENSCGRG00000005633	Trub2	84	51.799	Cricetulus_griseus_crigri
ENSPREG00000002549	trub2	89	65.232	ENSCSEG00000001331	trub2	86	67.014	Cynoglossus_semilaevis
ENSPREG00000002549	trub2	99	75.150	ENSCVAG00000009901	trub2	99	75.150	Cyprinodon_variegatus
ENSPREG00000002549	trub2	89	61.667	ENSDARG00000028379	trub2	82	63.415	Danio_rerio
ENSPREG00000002549	trub2	79	36.879	ENSDNOG00000043967	-	81	38.148	Dasypus_novemcinctus
ENSPREG00000002549	trub2	82	55.556	ENSDNOG00000045679	-	83	55.556	Dasypus_novemcinctus
ENSPREG00000002549	trub2	84	53.357	ENSDORG00000016222	Trub2	87	54.317	Dipodomys_ordii
ENSPREG00000002549	trub2	84	31.724	FBgn0033060	CG7849	90	31.834	Drosophila_melanogaster
ENSPREG00000002549	trub2	87	51.361	ENSETEG00000009114	TRUB2	86	53.237	Echinops_telfairi
ENSPREG00000002549	trub2	64	45.312	ENSEBUG00000015723	trub2	79	46.032	Eptatretus_burgeri
ENSPREG00000002549	trub2	84	53.710	ENSEASG00005016819	TRUB2	84	54.676	Equus_asinus_asinus
ENSPREG00000002549	trub2	84	53.710	ENSECAG00000023520	TRUB2	84	54.676	Equus_caballus
ENSPREG00000002549	trub2	86	51.890	ENSEEUG00000008908	TRUB2	84	53.597	Erinaceus_europaeus
ENSPREG00000002549	trub2	89	64.557	ENSELUG00000002376	trub2	94	65.563	Esox_lucius
ENSPREG00000002549	trub2	82	56.071	ENSFCAG00000005839	TRUB2	86	56.071	Felis_catus
ENSPREG00000002549	trub2	89	46.885	ENSFALG00000001364	TRUB2	98	47.213	Ficedula_albicollis
ENSPREG00000002549	trub2	84	53.357	ENSFDAG00000021374	TRUB2	95	48.649	Fukomys_damarensis
ENSPREG00000002549	trub2	100	72.189	ENSFHEG00000014655	trub2	100	71.893	Fundulus_heteroclitus
ENSPREG00000002549	trub2	87	58.844	ENSGMOG00000000981	trub2	94	60.211	Gadus_morhua
ENSPREG00000002549	trub2	81	54.380	ENSGALG00000004920	TRUB2	67	54.380	Gallus_gallus
ENSPREG00000002549	trub2	100	91.716	ENSGAFG00000010107	trub2	100	91.716	Gambusia_affinis
ENSPREG00000002549	trub2	96	68.389	ENSGACG00000001476	trub2	87	73.611	Gasterosteus_aculeatus
ENSPREG00000002549	trub2	83	55.674	ENSGAGG00000022872	TRUB2	82	55.957	Gopherus_agassizii
ENSPREG00000002549	trub2	82	54.317	ENSGGOG00000014780	TRUB2	84	54.317	Gorilla_gorilla
ENSPREG00000002549	trub2	97	72.783	ENSHBUG00000022384	trub2	98	72.783	Haplochromis_burtoni
ENSPREG00000002549	trub2	84	52.297	ENSHGLG00000016715	TRUB2	84	53.237	Heterocephalus_glaber_female
ENSPREG00000002549	trub2	84	52.297	ENSHGLG00100016548	TRUB2	84	53.237	Heterocephalus_glaber_male
ENSPREG00000002549	trub2	95	70.717	ENSHCOG00000017748	trub2	88	76.042	Hippocampus_comes
ENSPREG00000002549	trub2	89	60.596	ENSIPUG00000017725	hdhd3	50	62.718	Ictalurus_punctatus
ENSPREG00000002549	trub2	82	53.929	ENSSTOG00000008024	-	84	53.929	Ictidomys_tridecemlineatus
ENSPREG00000002549	trub2	84	52.982	ENSSTOG00000022617	-	84	53.929	Ictidomys_tridecemlineatus
ENSPREG00000002549	trub2	91	44.771	ENSJJAG00000019181	Trub2	82	48.201	Jaculus_jaculus
ENSPREG00000002549	trub2	94	72.424	ENSKMAG00000007861	trub2	86	78.746	Kryptolebias_marmoratus
ENSPREG00000002549	trub2	96	68.293	ENSLBEG00000000907	trub2	85	73.264	Labrus_bergylta
ENSPREG00000002549	trub2	99	48.968	ENSLACG00000001515	TRUB2	99	48.673	Latimeria_chalumnae
ENSPREG00000002549	trub2	86	60.900	ENSLOCG00000000885	trub2	95	61.111	Lepisosteus_oculatus
ENSPREG00000002549	trub2	84	53.004	ENSLAFG00000002174	TRUB2	91	53.957	Loxodonta_africana
ENSPREG00000002549	trub2	90	51.803	ENSMFAG00000000881	TRUB2	92	51.803	Macaca_fascicularis
ENSPREG00000002549	trub2	90	51.803	ENSMMUG00000014146	TRUB2	92	51.803	Macaca_mulatta
ENSPREG00000002549	trub2	90	51.803	ENSMNEG00000011189	TRUB2	92	51.803	Macaca_nemestrina
ENSPREG00000002549	trub2	90	51.803	ENSMLEG00000037270	TRUB2	92	51.803	Mandrillus_leucophaeus
ENSPREG00000002549	trub2	89	72.093	ENSMAMG00000023643	trub2	95	73.611	Mastacembelus_armatus
ENSPREG00000002549	trub2	97	72.477	ENSMZEG00005016018	trub2	98	72.477	Maylandia_zebra
ENSPREG00000002549	trub2	54	56.831	ENSMGAG00000003894	TRUB2	92	56.831	Meleagris_gallopavo
ENSPREG00000002549	trub2	84	51.590	ENSMAUG00000010403	Trub2	84	52.518	Mesocricetus_auratus
ENSPREG00000002549	trub2	84	54.417	ENSMICG00000047032	TRUB2	84	55.396	Microcebus_murinus
ENSPREG00000002549	trub2	84	52.650	ENSMOCG00000014291	Trub2	91	53.597	Microtus_ochrogaster
ENSPREG00000002549	trub2	93	69.620	ENSMMOG00000021674	trub2	89	73.264	Mola_mola
ENSPREG00000002549	trub2	84	51.930	ENSMODG00000005940	TRUB2	94	52.500	Monodelphis_domestica
ENSPREG00000002549	trub2	97	71.687	ENSMALG00000021231	trub2	98	71.386	Monopterus_albus
ENSPREG00000002549	trub2	84	50.883	MGP_CAROLIEiJ_G0023368	Trub2	87	48.824	Mus_caroli
ENSPREG00000002549	trub2	84	50.883	ENSMUSG00000039826	Trub2	87	48.824	Mus_musculus
ENSPREG00000002549	trub2	82	52.158	MGP_PahariEiJ_G0024826	Trub2	87	49.412	Mus_pahari
ENSPREG00000002549	trub2	84	51.237	MGP_SPRETEiJ_G0024286	Trub2	87	49.412	Mus_spretus
ENSPREG00000002549	trub2	88	53.177	ENSMPUG00000013206	TRUB2	77	55.282	Mustela_putorius_furo
ENSPREG00000002549	trub2	82	55.036	ENSMLUG00000005256	TRUB2	83	55.036	Myotis_lucifugus
ENSPREG00000002549	trub2	82	51.799	ENSNGAG00000018679	Trub2	84	51.799	Nannospalax_galili
ENSPREG00000002549	trub2	97	71.865	ENSNBRG00000016294	trub2	98	71.865	Neolamprologus_brichardi
ENSPREG00000002549	trub2	82	54.676	ENSNLEG00000017556	TRUB2	84	54.676	Nomascus_leucogenys
ENSPREG00000002549	trub2	83	53.191	ENSMEUG00000000484	TRUB2	89	53.791	Notamacropus_eugenii
ENSPREG00000002549	trub2	87	47.651	ENSOPRG00000001981	TRUB2	84	49.819	Ochotona_princeps
ENSPREG00000002549	trub2	87	52.349	ENSODEG00000017292	TRUB2	88	51.744	Octodon_degus
ENSPREG00000002549	trub2	97	72.783	ENSONIG00000004230	trub2	98	72.783	Oreochromis_niloticus
ENSPREG00000002549	trub2	56	50.532	ENSOANG00000029023	-	83	50.532	Ornithorhynchus_anatinus
ENSPREG00000002549	trub2	93	49.536	ENSOCUG00000026296	TRUB2	76	53.957	Oryctolagus_cuniculus
ENSPREG00000002549	trub2	96	69.817	ENSORLG00000020011	trub2	95	69.817	Oryzias_latipes
ENSPREG00000002549	trub2	94	70.219	ENSORLG00020011028	trub2	90	70.219	Oryzias_latipes_hni
ENSPREG00000002549	trub2	94	70.533	ENSORLG00015007494	trub2	94	70.846	Oryzias_latipes_hsok
ENSPREG00000002549	trub2	97	69.725	ENSOMEG00000006702	trub2	99	69.725	Oryzias_melastigma
ENSPREG00000002549	trub2	59	55.500	ENSOARG00000003785	-	81	55.122	Ovis_aries
ENSPREG00000002549	trub2	84	54.064	ENSOARG00000010579	-	84	55.036	Ovis_aries
ENSPREG00000002549	trub2	82	55.036	ENSPPAG00000043146	TRUB2	84	55.036	Pan_paniscus
ENSPREG00000002549	trub2	82	56.071	ENSPPRG00000006307	TRUB2	86	56.071	Panthera_pardus
ENSPREG00000002549	trub2	82	56.429	ENSPTIG00000012366	TRUB2	86	56.429	Panthera_tigris_altaica
ENSPREG00000002549	trub2	82	54.676	ENSPTRG00000052151	-	84	54.676	Pan_troglodytes
ENSPREG00000002549	trub2	82	54.676	ENSPTRG00000021423	TRUB2	84	54.676	Pan_troglodytes
ENSPREG00000002549	trub2	90	51.803	ENSPANG00000025856	TRUB2	92	51.803	Papio_anubis
ENSPREG00000002549	trub2	90	64.918	ENSPKIG00000019769	trub2	94	67.247	Paramormyrops_kingsleyae
ENSPREG00000002549	trub2	82	51.264	ENSPSIG00000015701	TRUB2	92	51.264	Pelodiscus_sinensis
ENSPREG00000002549	trub2	87	65.424	ENSPMGG00000010206	trub2	90	66.434	Periophthalmus_magnuspinnatus
ENSPREG00000002549	trub2	86	51.034	ENSPEMG00000017893	Trub2	91	49.123	Peromyscus_maniculatus_bairdii
ENSPREG00000002549	trub2	88	52.013	ENSPCIG00000026731	TRUB2	89	54.152	Phascolarctos_cinereus
ENSPREG00000002549	trub2	97	94.225	ENSPFOG00000018018	trub2	87	93.921	Poecilia_formosa
ENSPREG00000002549	trub2	97	94.833	ENSPLAG00000010484	trub2	94	94.529	Poecilia_latipinna
ENSPREG00000002549	trub2	100	95.266	ENSPMEG00000012913	trub2	100	95.266	Poecilia_mexicana
ENSPREG00000002549	trub2	82	54.676	ENSPPYG00000019650	TRUB2	85	54.676	Pongo_abelii
ENSPREG00000002549	trub2	84	54.064	ENSPCAG00000015068	TRUB2	85	55.036	Procavia_capensis
ENSPREG00000002549	trub2	84	54.770	ENSPCOG00000017100	TRUB2	84	55.755	Propithecus_coquereli
ENSPREG00000002549	trub2	78	52.453	ENSPVAG00000001224	TRUB2	87	53.462	Pteropus_vampyrus
ENSPREG00000002549	trub2	97	72.783	ENSPNYG00000013666	trub2	98	72.783	Pundamilia_nyererei
ENSPREG00000002549	trub2	100	55.652	ENSPNAG00000017292	trub2	82	63.066	Pygocentrus_nattereri
ENSPREG00000002549	trub2	84	51.761	ENSRNOG00000043189	Trub2	86	52.688	Rattus_norvegicus
ENSPREG00000002549	trub2	89	47.841	ENSRBIG00000006965	TRUB2	82	50.360	Rhinopithecus_bieti
ENSPREG00000002549	trub2	89	52.824	ENSRROG00000042928	TRUB2	84	55.755	Rhinopithecus_roxellana
ENSPREG00000002549	trub2	82	54.317	ENSSBOG00000022439	TRUB2	84	54.317	Saimiri_boliviensis_boliviensis
ENSPREG00000002549	trub2	85	63.542	ENSSFOG00015013391	trub2	92	63.542	Scleropages_formosus
ENSPREG00000002549	trub2	88	73.826	ENSSMAG00000020820	trub2	88	74.653	Scophthalmus_maximus
ENSPREG00000002549	trub2	97	71.560	ENSSDUG00000016928	trub2	97	71.560	Seriola_dumerili
ENSPREG00000002549	trub2	97	70.336	ENSSLDG00000024701	trub2	97	70.336	Seriola_lalandi_dorsalis
ENSPREG00000002549	trub2	86	50.865	ENSSPUG00000015515	TRUB2	84	51.590	Sphenodon_punctatus
ENSPREG00000002549	trub2	99	70.623	ENSSPAG00000017865	trub2	100	69.643	Stegastes_partitus
ENSPREG00000002549	trub2	82	53.597	ENSSSCG00000005645	TRUB2	84	52.610	Sus_scrofa
ENSPREG00000002549	trub2	75	52.964	ENSTGUG00000003704	TRUB2	94	53.629	Taeniopygia_guttata
ENSPREG00000002549	trub2	96	67.485	ENSTRUG00000015499	trub2	88	72.917	Takifugu_rubripes
ENSPREG00000002549	trub2	86	70.890	ENSTNIG00000014721	trub2	98	71.777	Tetraodon_nigroviridis
ENSPREG00000002549	trub2	54	50.820	ENSTBEG00000000586	TRUB2	79	52.247	Tupaia_belangeri
ENSPREG00000002549	trub2	84	51.590	ENSTTRG00000016486	TRUB2	84	52.518	Tursiops_truncatus
ENSPREG00000002549	trub2	85	54.325	ENSUAMG00000020276	TRUB2	83	55.282	Ursus_americanus
ENSPREG00000002549	trub2	85	54.671	ENSUMAG00000022051	TRUB2	83	55.634	Ursus_maritimus
ENSPREG00000002549	trub2	84	42.403	ENSVPAG00000005793	TRUB2	87	43.165	Vicugna_pacos
ENSPREG00000002549	trub2	87	51.987	ENSVVUG00000013451	TRUB2	84	52.862	Vulpes_vulpes
ENSPREG00000002549	trub2	88	51.307	ENSXETG00000003973	trub2	86	54.417	Xenopus_tropicalis
ENSPREG00000002549	trub2	100	92.012	ENSXCOG00000008759	trub2	100	92.899	Xiphophorus_couchianus
ENSPREG00000002549	trub2	100	92.604	ENSXMAG00000015478	trub2	100	93.491	Xiphophorus_maculatus