EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPREG00000002835 (Gene tree)
Gene ID
-
Gene Symbol
prpf38a
Alias
fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name
pre-mRNA processing factor 38A
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
3236 bases
Position
chrLG4:4512016-4515251
Accession
103463189
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000003987PRP38PF03371.157e-6311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000004043-975XM_008406410ENSPREP00000003987324 (aa)XP_008404632-
Gene Model
Click here to download ENSPREG00000002835's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002835's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000002835prpf38a5894.149ENSG00000134748PRPF38A9573.667Homo_sapiens
ENSPREG00000002835prpf38a5898.404ENSAPOG00000011652prpf38a9481.208Acanthochromis_polyacanthus
ENSPREG00000002835prpf38a5894.149ENSAMEG00000009319PRPF38A9573.667Ailuropoda_melanoleuca
ENSPREG00000002835prpf38a5895.213ENSACIG00000012292prpf38a8578.947Amphilophus_citrinellus
ENSPREG00000002835prpf38a5898.404ENSAOCG00000018004prpf38a9481.208Amphiprion_ocellaris
ENSPREG00000002835prpf38a5898.404ENSAPEG00000021414prpf38a9481.208Amphiprion_percula
ENSPREG00000002835prpf38a5896.257ENSATEG00000004608prpf38a8381.609Anabas_testudineus
ENSPREG00000002835prpf38a5891.489ENSACAG00000008249PRPF38A9571.010Anolis_carolinensis
ENSPREG00000002835prpf38a5894.149ENSANAG00000027839PRPF38A9573.667Aotus_nancymaae
ENSPREG00000002835prpf38a5956.410ENSANAG00000029204-5856.771Aotus_nancymaae
ENSPREG00000002835prpf38a5896.277ENSACLG00000021595prpf38a9479.195Astatotilapia_calliptera
ENSPREG00000002835prpf38a5896.277ENSAMXG00000029274prpf38a9580.667Astyanax_mexicanus
ENSPREG00000002835prpf38a5894.149ENSBTAG00000002720PRPF38A9573.667Bos_taurus
ENSPREG00000002835prpf38a6063.590WBGene00008380prp-385965.426Caenorhabditis_elegans
ENSPREG00000002835prpf38a5894.149ENSCJAG00000021594PRPF38A9576.224Callithrix_jacchus
ENSPREG00000002835prpf38a5894.149ENSCAFG00000003740PRPF38A9573.667Canis_familiaris
ENSPREG00000002835prpf38a5894.149ENSCAFG00020010939PRPF38A9573.667Canis_lupus_dingo
ENSPREG00000002835prpf38a5894.149ENSCHIG00000024730PRPF38A9573.667Capra_hircus
ENSPREG00000002835prpf38a5894.149ENSTSYG00000009868-9573.667Carlito_syrichta
ENSPREG00000002835prpf38a5894.149ENSCPOG00000005079PRPF38A9573.667Cavia_porcellus
ENSPREG00000002835prpf38a5894.149ENSCCAG00000026502PRPF38A8377.947Cebus_capucinus
ENSPREG00000002835prpf38a5857.672ENSCATG00000044190-5757.447Cercocebus_atys
ENSPREG00000002835prpf38a5894.149ENSCATG00000032296PRPF38A9573.667Cercocebus_atys
ENSPREG00000002835prpf38a5894.149ENSCLAG00000005816PRPF38A9573.667Chinchilla_lanigera
ENSPREG00000002835prpf38a5893.085ENSCPBG00000014791PRPF38A9572.313Chrysemys_picta_bellii
ENSPREG00000002835prpf38a6174.372ENSCSAVG00000009580-6276.064Ciona_savignyi
ENSPREG00000002835prpf38a5894.149ENSCANG00000032608PRPF38A9973.667Colobus_angolensis_palliatus
ENSPREG00000002835prpf38a5894.149ENSCGRG00001018502-9573.667Cricetulus_griseus_chok1gshd
ENSPREG00000002835prpf38a8264.794ENSCGRG00001002557-8762.278Cricetulus_griseus_chok1gshd
ENSPREG00000002835prpf38a5894.149ENSCGRG00000014868Prpf38a9573.667Cricetulus_griseus_crigri
ENSPREG00000002835prpf38a5894.149ENSCSEG00000001269prpf38a8879.623Cynoglossus_semilaevis
ENSPREG00000002835prpf38a5898.936ENSCVAG00000012305prpf38a9481.063Cyprinodon_variegatus
ENSPREG00000002835prpf38a5896.277ENSDARG00000039213prpf38a9579.000Danio_rerio
ENSPREG00000002835prpf38a5894.149ENSDNOG00000042326PRPF38A9573.667Dasypus_novemcinctus
ENSPREG00000002835prpf38a9263.576ENSDORG00000023857-9497.917Dipodomys_ordii
ENSPREG00000002835prpf38a5689.071ENSDORG00000025371-6789.362Dipodomys_ordii
ENSPREG00000002835prpf38a5689.071ENSDORG00000023691-6789.362Dipodomys_ordii
ENSPREG00000002835prpf38a6373.171FBgn0050342Prp385776.064Drosophila_melanogaster
ENSPREG00000002835prpf38a8363.514ENSEBUG00000012588prpf38a9570.764Eptatretus_burgeri
ENSPREG00000002835prpf38a5894.149ENSEASG00005014427PRPF38A9573.667Equus_asinus_asinus
ENSPREG00000002835prpf38a5894.149ENSECAG00000022628PRPF38A9573.667Equus_caballus
ENSPREG00000002835prpf38a5895.213ENSELUG00000021094prpf38a9978.859Esox_lucius
ENSPREG00000002835prpf38a5894.149ENSFCAG00000002518PRPF38A9573.667Felis_catus
ENSPREG00000002835prpf38a5888.830ENSFALG00000003612-8474.713Ficedula_albicollis
ENSPREG00000002835prpf38a8078.764ENSFDAG00000011287PRPF38A9573.667Fukomys_damarensis
ENSPREG00000002835prpf38a8987.586ENSFHEG00000014317prpf38a9687.372Fundulus_heteroclitus
ENSPREG00000002835prpf38a5198.193ENSGMOG00000011384prpf38a5498.193Gadus_morhua
ENSPREG00000002835prpf38a5894.149ENSGALG00000010627PRPF38A9572.964Gallus_gallus
ENSPREG00000002835prpf38a5899.468ENSGAFG00000012422prpf38a9481.457Gambusia_affinis
ENSPREG00000002835prpf38a5894.681ENSGACG00000005423prpf38a9578.930Gasterosteus_aculeatus
ENSPREG00000002835prpf38a5893.085ENSGAGG00000020547PRPF38A9572.313Gopherus_agassizii
ENSPREG00000002835prpf38a5894.149ENSGGOG00000003940PRPF38A9573.667Gorilla_gorilla
ENSPREG00000002835prpf38a6396.059ENSHBUG00000020572prpf38a8696.059Haplochromis_burtoni
ENSPREG00000002835prpf38a6081.443ENSHGLG00000007918-6082.447Heterocephalus_glaber_female
ENSPREG00000002835prpf38a5894.149ENSHGLG00000000475PRPF38A9573.667Heterocephalus_glaber_female
ENSPREG00000002835prpf38a5894.149ENSHGLG00100008935PRPF38A9573.667Heterocephalus_glaber_male
ENSPREG00000002835prpf38a6081.443ENSHGLG00100003928-6082.447Heterocephalus_glaber_male
ENSPREG00000002835prpf38a5693.407ENSHCOG00000020781prpf38a5993.617Hippocampus_comes
ENSPREG00000002835prpf38a5896.296ENSIPUG00000005757prpf38a9578.738Ictalurus_punctatus
ENSPREG00000002835prpf38a5894.149ENSSTOG00000015610PRPF38A9573.667Ictidomys_tridecemlineatus
ENSPREG00000002835prpf38a5893.085ENSJJAG00000015811Prpf38a9573.000Jaculus_jaculus
ENSPREG00000002835prpf38a5897.872ENSKMAG00000006588prpf38a9480.872Kryptolebias_marmoratus
ENSPREG00000002835prpf38a5894.709ENSLBEG00000020585prpf38a8380.077Labrus_bergylta
ENSPREG00000002835prpf38a5892.021ENSLACG00000011495PRPF38A9572.697Latimeria_chalumnae
ENSPREG00000002835prpf38a5894.709ENSLOCG00000006262prpf38a9578.333Lepisosteus_oculatus
ENSPREG00000002835prpf38a5894.149ENSLAFG00000025862PRPF38A9573.667Loxodonta_africana
ENSPREG00000002835prpf38a5894.149ENSMFAG00000039449PRPF38A9676.042Macaca_fascicularis
ENSPREG00000002835prpf38a5858.201ENSMNEG00000040242-5757.979Macaca_nemestrina
ENSPREG00000002835prpf38a5894.149ENSMNEG00000031221PRPF38A9573.667Macaca_nemestrina
ENSPREG00000002835prpf38a5894.149ENSMLEG00000041105PRPF38A9573.667Mandrillus_leucophaeus
ENSPREG00000002835prpf38a5897.340ENSMAMG00000015431prpf38a9480.872Mastacembelus_armatus
ENSPREG00000002835prpf38a5896.277ENSMZEG00005017838prpf38a9479.195Maylandia_zebra
ENSPREG00000002835prpf38a5894.149ENSMGAG00000011176PRPF38A9972.964Meleagris_gallopavo
ENSPREG00000002835prpf38a5790.217ENSMAUG00000018029-7189.894Mesocricetus_auratus
ENSPREG00000002835prpf38a5894.149ENSMICG00000014193PRPF38A9573.667Microcebus_murinus
ENSPREG00000002835prpf38a5894.149ENSMOCG00000013080Prpf38a9573.667Microtus_ochrogaster
ENSPREG00000002835prpf38a5895.745ENSMMOG00000016972prpf38a8981.992Mola_mola
ENSPREG00000002835prpf38a5894.149ENSMODG00000000644PRPF38A9572.667Monodelphis_domestica
ENSPREG00000002835prpf38a5896.809ENSMALG00000019363prpf38a9280.872Monopterus_albus
ENSPREG00000002835prpf38a5893.617MGP_CAROLIEiJ_G0026269Prpf38a9573.333Mus_caroli
ENSPREG00000002835prpf38a5893.617ENSMUSG00000063800Prpf38a9573.333Mus_musculus
ENSPREG00000002835prpf38a5893.617MGP_PahariEiJ_G0028602Prpf38a9573.333Mus_pahari
ENSPREG00000002835prpf38a5893.617MGP_SPRETEiJ_G0027238Prpf38a9393.617Mus_spretus
ENSPREG00000002835prpf38a5894.149ENSMPUG00000006896PRPF38A9573.667Mustela_putorius_furo
ENSPREG00000002835prpf38a5894.149ENSNGAG00000011884Prpf38a9573.667Nannospalax_galili
ENSPREG00000002835prpf38a5894.681ENSNBRG00000004013prpf38a8379.323Neolamprologus_brichardi
ENSPREG00000002835prpf38a8855.749ENSNLEG00000012592-5460.106Nomascus_leucogenys
ENSPREG00000002835prpf38a5193.939ENSNLEG00000017999PRPF38A8871.841Nomascus_leucogenys
ENSPREG00000002835prpf38a8670.609ENSMEUG00000003860PRPF38A9067.657Notamacropus_eugenii
ENSPREG00000002835prpf38a5894.149ENSOPRG00000008985PRPF38A7894.149Ochotona_princeps
ENSPREG00000002835prpf38a5894.149ENSODEG00000005869PRPF38A9573.667Octodon_degus
ENSPREG00000002835prpf38a5895.745ENSONIG00000007816prpf38a9478.859Oreochromis_niloticus
ENSPREG00000002835prpf38a5940.625ENSOANG00000009541-6040.526Ornithorhynchus_anatinus
ENSPREG00000002835prpf38a5894.149ENSOCUG00000000963PRPF38A9573.667Oryctolagus_cuniculus
ENSPREG00000002835prpf38a5898.404ENSORLG00000013485prpf38a9981.208Oryzias_latipes
ENSPREG00000002835prpf38a5898.404ENSORLG00020002130prpf38a9981.208Oryzias_latipes_hni
ENSPREG00000002835prpf38a6397.549ENSORLG00015021393prpf38a9980.872Oryzias_latipes_hsok
ENSPREG00000002835prpf38a5897.872ENSOMEG00000016333prpf38a9480.872Oryzias_melastigma
ENSPREG00000002835prpf38a5894.149ENSOGAG00000005423PRPF38A9573.667Otolemur_garnettii
ENSPREG00000002835prpf38a5894.149ENSOARG00000005373PRPF38A9573.667Ovis_aries
ENSPREG00000002835prpf38a5894.149ENSPPAG00000030905PRPF38A9573.667Pan_paniscus
ENSPREG00000002835prpf38a8762.544ENSPPAG00000033867-5676.301Pan_paniscus
ENSPREG00000002835prpf38a5894.149ENSPPRG00000013268PRPF38A9573.667Panthera_pardus
ENSPREG00000002835prpf38a5894.149ENSPTIG00000015419PRPF38A9573.667Panthera_tigris_altaica
ENSPREG00000002835prpf38a5894.149ENSPTRG00000000739PRPF38A9675.694Pan_troglodytes
ENSPREG00000002835prpf38a5894.149ENSPANG00000015483PRPF38A9573.667Papio_anubis
ENSPREG00000002835prpf38a5893.617ENSPKIG00000011439prpf38a9578.930Paramormyrops_kingsleyae
ENSPREG00000002835prpf38a5893.617ENSPSIG00000017487PRPF38A9572.313Pelodiscus_sinensis
ENSPREG00000002835prpf38a5895.745ENSPMGG00000021352prpf38a6495.745Periophthalmus_magnuspinnatus
ENSPREG00000002835prpf38a5894.149ENSPEMG00000023277-9573.667Peromyscus_maniculatus_bairdii
ENSPREG00000002835prpf38a5987.435ENSPEMG00000011212-9469.767Peromyscus_maniculatus_bairdii
ENSPREG00000002835prpf38a5893.617ENSPCIG00000022369-9572.333Phascolarctos_cinereus
ENSPREG00000002835prpf38a5899.468ENSPFOG00000004248prpf38a9481.457Poecilia_formosa
ENSPREG00000002835prpf38a10089.602ENSPLAG00000010328prpf38a10089.602Poecilia_latipinna
ENSPREG00000002835prpf38a10089.602ENSPMEG00000011804prpf38a10089.602Poecilia_mexicana
ENSPREG00000002835prpf38a5880.829ENSPPYG00000001348PRPF38A8368.657Pongo_abelii
ENSPREG00000002835prpf38a5893.617ENSPCAG00000013328PRPF38A9573.333Procavia_capensis
ENSPREG00000002835prpf38a8762.162ENSPCOG00000020709-6479.787Propithecus_coquereli
ENSPREG00000002835prpf38a5894.149ENSPCOG00000016387-9573.667Propithecus_coquereli
ENSPREG00000002835prpf38a5894.149ENSPVAG00000009803PRPF38A9573.667Pteropus_vampyrus
ENSPREG00000002835prpf38a5896.277ENSPNYG00000005571prpf38a9479.195Pundamilia_nyererei
ENSPREG00000002835prpf38a5895.213ENSPNAG00000010399prpf38a9579.667Pygocentrus_nattereri
ENSPREG00000002835prpf38a5894.681ENSRNOG00000009451Prpf38a9574.000Rattus_norvegicus
ENSPREG00000002835prpf38a5894.149ENSRBIG00000036442PRPF38A9973.667Rhinopithecus_bieti
ENSPREG00000002835prpf38a5894.149ENSRROG00000032788PRPF38A9573.667Rhinopithecus_roxellana
ENSPREG00000002835prpf38a8265.918ENSRROG00000040003-8365.517Rhinopithecus_roxellana
ENSPREG00000002835prpf38a5894.149ENSSBOG00000019515PRPF38A9573.667Saimiri_boliviensis_boliviensis
ENSPREG00000002835prpf38a6080.928ENSSHAG00000006029-6282.353Sarcophilus_harrisii
ENSPREG00000002835prpf38a5893.617ENSSFOG00015013572prpf38a9577.667Scleropages_formosus
ENSPREG00000002835prpf38a5896.277ENSSMAG00000015379prpf38a9480.678Scophthalmus_maximus
ENSPREG00000002835prpf38a5897.872ENSSDUG00000001324prpf38a9481.208Seriola_dumerili
ENSPREG00000002835prpf38a5897.872ENSSLDG00000014803prpf38a9481.208Seriola_lalandi_dorsalis
ENSPREG00000002835prpf38a5865.957ENSSARG00000014458PRPF38A9456.229Sorex_araneus
ENSPREG00000002835prpf38a5892.021ENSSPUG00000013259PRPF38A9571.010Sphenodon_punctatus
ENSPREG00000002835prpf38a8869.474ENSSPAG00000010449prpf38a8969.474Stegastes_partitus
ENSPREG00000002835prpf38a5894.149ENSSSCG00000028288PRPF38A9573.667Sus_scrofa
ENSPREG00000002835prpf38a5887.766ENSTGUG00000008995PRPF38A9569.381Taeniopygia_guttata
ENSPREG00000002835prpf38a5895.213ENSTRUG00000003374prpf38a7881.008Takifugu_rubripes
ENSPREG00000002835prpf38a5893.158ENSTNIG00000005533prpf38a9478.788Tetraodon_nigroviridis
ENSPREG00000002835prpf38a5894.149ENSTBEG00000000725PRPF38A9573.667Tupaia_belangeri
ENSPREG00000002835prpf38a5894.149ENSTTRG00000016139PRPF38A9573.667Tursiops_truncatus
ENSPREG00000002835prpf38a5894.149ENSUAMG00000000625PRPF38A9573.667Ursus_americanus
ENSPREG00000002835prpf38a5894.149ENSUMAG00000022674PRPF38A9573.667Ursus_maritimus
ENSPREG00000002835prpf38a5894.149ENSVPAG00000000907PRPF38A8377.567Vicugna_pacos
ENSPREG00000002835prpf38a5894.149ENSVVUG00000004475PRPF38A9573.667Vulpes_vulpes
ENSPREG00000002835prpf38a5891.489ENSXETG00000008060prpf38a6091.489Xenopus_tropicalis
ENSPREG00000002835prpf38a5896.842ENSXCOG00000007393prpf38a8480.657Xiphophorus_couchianus
ENSPREG00000002835prpf38a5899.468ENSXMAG00000026143prpf38a9481.457Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us