EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPREG00000002867 (Gene tree)
Gene ID
103477103
Gene Symbol
polr1b
Alias
wu:fc91a05|zgc:66298
Full Name
RNA polymerase I subunit B
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
12161 bases
Position
chrLG15:22733243-22745403
Accession
103477103
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000004067RNA_pol_Rpa2_4PF06883.127.6e-2211
ENSPREP00000004067RNA_pol_Rpb2_1PF04563.151.7e-3611
ENSPREP00000004067RNA_pol_Rpb2_2PF04561.143.9e-0811
ENSPREP00000004067RNA_pol_Rpb2_3PF04565.163.4e-2811
ENSPREP00000004067RNA_pol_Rpb2_7PF04560.202.3e-2111
ENSPREP00000004067RNA_pol_Rpb2_6PF00562.285.5e-11411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000004126-3450XM_008430005ENSPREP000000040671134 (aa)XP_008428227UPI0004A363EC
Gene Model
Click here to download ENSPREG00000002867's gene model file
Pathways
Pathway IDPathway NameSource
pret03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002867's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000002867polr1b9976.367ENSG00000125630POLR1B9982.609Homo_sapiens
ENSPREG00000002867polr1b10088.007ENSAPOG00000000931polr1b10088.007Acanthochromis_polyacanthus
ENSPREG00000002867polr1b9976.631ENSAMEG00000010826POLR1B9976.631Ailuropoda_melanoleuca
ENSPREG00000002867polr1b10087.654ENSACIG00000002290polr1b10087.654Amphilophus_citrinellus
ENSPREG00000002867polr1b10087.654ENSAOCG00000004249polr1b10087.654Amphiprion_ocellaris
ENSPREG00000002867polr1b10087.743ENSAPEG00000004971polr1b10087.743Amphiprion_percula
ENSPREG00000002867polr1b10088.007ENSATEG00000010957polr1b10088.007Anabas_testudineus
ENSPREG00000002867polr1b9468.692ENSAPLG00000004142POLR1B9968.692Anas_platyrhynchos
ENSPREG00000002867polr1b5169.297ENSACAG00000005660POLR1B9969.297Anolis_carolinensis
ENSPREG00000002867polr1b6178.437ENSACAG00000007117-9978.726Anolis_carolinensis
ENSPREG00000002867polr1b9976.300ENSANAG00000026201POLR1B9981.736Aotus_nancymaae
ENSPREG00000002867polr1b10088.183ENSACLG00000019089polr1b10088.183Astatotilapia_calliptera
ENSPREG00000002867polr1b10081.746ENSAMXG00000037818polr1b10081.746Astyanax_mexicanus
ENSPREG00000002867polr1b9976.455ENSBTAG00000014166POLR1B9976.455Bos_taurus
ENSPREG00000002867polr1b9745.463WBGene00008781rpoa-29945.463Caenorhabditis_elegans
ENSPREG00000002867polr1b9976.279ENSCJAG00000016433POLR1B9982.246Callithrix_jacchus
ENSPREG00000002867polr1b9976.279ENSCAFG00000007174POLR1B9976.279Canis_familiaris
ENSPREG00000002867polr1b9976.367ENSCAFG00020017367POLR1B9976.367Canis_lupus_dingo
ENSPREG00000002867polr1b9976.631ENSCHIG00000014527POLR1B9976.631Capra_hircus
ENSPREG00000002867polr1b9975.309ENSTSYG00000003669POLR1B9980.072Carlito_syrichta
ENSPREG00000002867polr1b9083.024ENSCAPG00000012821POLR1B8583.024Cavia_aperea
ENSPREG00000002867polr1b9975.397ENSCPOG00000015744POLR1B9975.397Cavia_porcellus
ENSPREG00000002867polr1b8636.463ENSCPOG00000004891POLR3B8636.463Cavia_porcellus
ENSPREG00000002867polr1b9976.543ENSCCAG00000035252POLR1B9982.246Cebus_capucinus
ENSPREG00000002867polr1b9976.279ENSCATG00000037382POLR1B9982.428Cercocebus_atys
ENSPREG00000002867polr1b6937.148ENSCATG00000035334POLR3B7137.148Cercocebus_atys
ENSPREG00000002867polr1b9975.573ENSCLAG00000004899POLR1B9975.573Chinchilla_lanigera
ENSPREG00000002867polr1b9976.455ENSCSAG00000016783POLR1B9976.455Chlorocebus_sabaeus
ENSPREG00000002867polr1b8577.423ENSCHOG00000007229POLR1B9977.423Choloepus_hoffmanni
ENSPREG00000002867polr1b9579.070ENSCPBG00000003962POLR1B9979.874Chrysemys_picta_bellii
ENSPREG00000002867polr1b9953.975ENSCING00000003329-9954.281Ciona_intestinalis
ENSPREG00000002867polr1b7433.379ENSCSAVG00000007982-8831.579Ciona_savignyi
ENSPREG00000002867polr1b9041.053ENSCSAVG00000000129-8341.053Ciona_savignyi
ENSPREG00000002867polr1b9976.190ENSCANG00000039531POLR1B9981.884Colobus_angolensis_palliatus
ENSPREG00000002867polr1b9975.926ENSCGRG00001014254Polr1b9975.926Cricetulus_griseus_chok1gshd
ENSPREG00000002867polr1b9975.838ENSCGRG00000017847Polr1b9975.838Cricetulus_griseus_crigri
ENSPREG00000002867polr1b10084.832ENSCSEG00000008564polr1b10084.832Cynoglossus_semilaevis
ENSPREG00000002867polr1b10091.799ENSCVAG00000005824polr1b10091.799Cyprinodon_variegatus
ENSPREG00000002867polr1b9980.691ENSDARG00000077469polr1b9980.691Danio_rerio
ENSPREG00000002867polr1b9975.804ENSDNOG00000017718POLR1B9875.750Dasypus_novemcinctus
ENSPREG00000002867polr1b9975.750ENSDORG00000014309Polr1b9975.750Dipodomys_ordii
ENSPREG00000002867polr1b9845.259FBgn0003278RpI1359845.259Drosophila_melanogaster
ENSPREG00000002867polr1b8979.006ENSETEG00000004001POLR1B8979.006Echinops_telfairi
ENSPREG00000002867polr1b5733.817ENSETEG00000017715POLR3B6133.817Echinops_telfairi
ENSPREG00000002867polr1b5636.576ENSETEG00000011734POLR2B5636.576Echinops_telfairi
ENSPREG00000002867polr1b6232.752ENSEBUG00000010186-6832.752Eptatretus_burgeri
ENSPREG00000002867polr1b6370.748ENSEBUG00000015791polr1b9958.375Eptatretus_burgeri
ENSPREG00000002867polr1b9976.367ENSEASG00005006504POLR1B9976.367Equus_asinus_asinus
ENSPREG00000002867polr1b8743.033ENSEASG00005021189POLR3B9243.033Equus_asinus_asinus
ENSPREG00000002867polr1b7532.672ENSECAG00000019086POLR3B7832.672Equus_caballus
ENSPREG00000002867polr1b9976.367ENSECAG00000010062POLR1B9976.367Equus_caballus
ENSPREG00000002867polr1b7688.699ENSEEUG00000004559-8088.699Erinaceus_europaeus
ENSPREG00000002867polr1b7433.000ENSEEUG00000009798POLR2B7533.000Erinaceus_europaeus
ENSPREG00000002867polr1b10082.716ENSELUG00000019627polr1b10082.716Esox_lucius
ENSPREG00000002867polr1b9976.631ENSFCAG00000008091POLR1B9981.341Felis_catus
ENSPREG00000002867polr1b8969.733ENSFALG00000000717POLR1B10069.733Ficedula_albicollis
ENSPREG00000002867polr1b9975.397ENSFDAG00000020976POLR1B9975.397Fukomys_damarensis
ENSPREG00000002867polr1b7341.497ENSFHEG00000008215polr3b7541.497Fundulus_heteroclitus
ENSPREG00000002867polr1b8689.169ENSFHEG00000000533polr1b9389.169Fundulus_heteroclitus
ENSPREG00000002867polr1b9272.937ENSGMOG00000005847polr1b10072.937Gadus_morhua
ENSPREG00000002867polr1b9568.837ENSGALG00000032273POLR1B9668.837Gallus_gallus
ENSPREG00000002867polr1b10096.914ENSGAFG00000001383polr1b10096.914Gambusia_affinis
ENSPREG00000002867polr1b10084.595ENSGACG00000003012polr1b10084.595Gasterosteus_aculeatus
ENSPREG00000002867polr1b9578.419ENSGAGG00000016312POLR1B9978.995Gopherus_agassizii
ENSPREG00000002867polr1b9976.279ENSGGOG00000013494POLR1B9982.428Gorilla_gorilla
ENSPREG00000002867polr1b10088.183ENSHBUG00000012650polr1b10088.183Haplochromis_burtoni
ENSPREG00000002867polr1b9975.220ENSHGLG00000011497POLR1B9975.220Heterocephalus_glaber_female
ENSPREG00000002867polr1b9974.603ENSHGLG00100009371POLR1B9974.603Heterocephalus_glaber_male
ENSPREG00000002867polr1b10080.335ENSHCOG00000000709polr1b10080.335Hippocampus_comes
ENSPREG00000002867polr1b10082.275ENSIPUG00000018216polr1b10082.275Ictalurus_punctatus
ENSPREG00000002867polr1b9130.173ENSIPUG00000016720Polr3b9630.173Ictalurus_punctatus
ENSPREG00000002867polr1b9577.374ENSSTOG00000008160POLR1B9977.374Ictidomys_tridecemlineatus
ENSPREG00000002867polr1b9970.335ENSJJAG00000000143Polr1b9970.335Jaculus_jaculus
ENSPREG00000002867polr1b10087.566ENSKMAG00000016037polr1b10087.566Kryptolebias_marmoratus
ENSPREG00000002867polr1b10081.305ENSLBEG00000027396polr1b10081.570Labrus_bergylta
ENSPREG00000002867polr1b10079.119ENSLACG00000009481POLR1B10079.119Latimeria_chalumnae
ENSPREG00000002867polr1b9981.122ENSLOCG00000016558polr1b9981.122Lepisosteus_oculatus
ENSPREG00000002867polr1b9975.901ENSLAFG00000007659POLR1B9981.374Loxodonta_africana
ENSPREG00000002867polr1b8532.749ENSMFAG00000038425POLR3B8932.749Macaca_fascicularis
ENSPREG00000002867polr1b9976.386ENSMFAG00000032912POLR1B9982.246Macaca_fascicularis
ENSPREG00000002867polr1b9976.386ENSMMUG00000009468POLR1B9982.246Macaca_mulatta
ENSPREG00000002867polr1b9976.367ENSMNEG00000036047POLR1B9982.428Macaca_nemestrina
ENSPREG00000002867polr1b9972.663ENSMLEG00000030588POLR1B9982.428Mandrillus_leucophaeus
ENSPREG00000002867polr1b10087.654ENSMAMG00000013118polr1b10087.654Mastacembelus_armatus
ENSPREG00000002867polr1b10088.183ENSMZEG00005011850polr1b10088.183Maylandia_zebra
ENSPREG00000002867polr1b9269.799ENSMGAG00000007074POLR1B9969.799Meleagris_gallopavo
ENSPREG00000002867polr1b8871.089ENSMAUG00000010593Polr1b9971.089Mesocricetus_auratus
ENSPREG00000002867polr1b9976.279ENSMICG00000013245POLR1B9976.279Microcebus_murinus
ENSPREG00000002867polr1b9975.926ENSMOCG00000005942Polr1b9975.926Microtus_ochrogaster
ENSPREG00000002867polr1b10086.079ENSMMOG00000008388polr1b10086.079Mola_mola
ENSPREG00000002867polr1b9978.131ENSMODG00000006573POLR1B9978.131Monodelphis_domestica
ENSPREG00000002867polr1b10085.097ENSMALG00000008958polr1b10085.097Monopterus_albus
ENSPREG00000002867polr1b9577.116MGP_CAROLIEiJ_G0024281Polr1b9977.116Mus_caroli
ENSPREG00000002867polr1b9975.132ENSMUSG00000027395Polr1b9975.132Mus_musculus
ENSPREG00000002867polr1b8637.148MGP_PahariEiJ_G0031407Polr3b8837.148Mus_pahari
ENSPREG00000002867polr1b9976.190MGP_PahariEiJ_G0025726Polr1b9976.190Mus_pahari
ENSPREG00000002867polr1b9975.309MGP_SPRETEiJ_G0025201Polr1b9975.309Mus_spretus
ENSPREG00000002867polr1b9972.751ENSMPUG00000009644POLR1B9972.751Mustela_putorius_furo
ENSPREG00000002867polr1b9976.896ENSMLUG00000004910POLR1B9976.896Myotis_lucifugus
ENSPREG00000002867polr1b9975.838ENSNGAG00000021472Polr1b9975.838Nannospalax_galili
ENSPREG00000002867polr1b10088.183ENSNBRG00000017979polr1b10088.183Neolamprologus_brichardi
ENSPREG00000002867polr1b9973.104ENSNLEG00000001656POLR1B9982.065Nomascus_leucogenys
ENSPREG00000002867polr1b7580.080ENSMEUG00000013915POLR1B7580.080Notamacropus_eugenii
ENSPREG00000002867polr1b9975.220ENSOPRG00000012742POLR1B9975.220Ochotona_princeps
ENSPREG00000002867polr1b5536.986ENSOPRG00000008568POLR3B5536.986Ochotona_princeps
ENSPREG00000002867polr1b9969.577ENSODEG00000005501POLR1B9969.577Octodon_degus
ENSPREG00000002867polr1b10088.360ENSONIG00000010382polr1b10088.360Oreochromis_niloticus
ENSPREG00000002867polr1b9279.981ENSOANG00000003621POLR1B9979.981Ornithorhynchus_anatinus
ENSPREG00000002867polr1b9976.367ENSOCUG00000006058POLR1B9976.367Oryctolagus_cuniculus
ENSPREG00000002867polr1b10087.489ENSORLG00000000890polr1b10087.489Oryzias_latipes
ENSPREG00000002867polr1b10087.489ENSORLG00015011105polr1b10087.489Oryzias_latipes_hsok
ENSPREG00000002867polr1b10086.872ENSOMEG00000005073polr1b10086.872Oryzias_melastigma
ENSPREG00000002867polr1b9976.367ENSOGAG00000007367POLR1B9776.367Otolemur_garnettii
ENSPREG00000002867polr1b9976.652ENSOARG00000020904POLR1B9976.652Ovis_aries
ENSPREG00000002867polr1b9976.279ENSPPAG00000002774POLR1B9982.428Pan_paniscus
ENSPREG00000002867polr1b9976.631ENSPPRG00000005760POLR1B9981.522Panthera_pardus
ENSPREG00000002867polr1b9976.808ENSPTIG00000013496POLR1B9981.522Panthera_tigris_altaica
ENSPREG00000002867polr1b9976.279ENSPTRG00000012366POLR1B9982.246Pan_troglodytes
ENSPREG00000002867polr1b9976.279ENSPANG00000023423POLR1B9982.428Papio_anubis
ENSPREG00000002867polr1b9338.806ENSPKIG00000000008polr2b9038.806Paramormyrops_kingsleyae
ENSPREG00000002867polr1b10078.660ENSPKIG00000007536polr1b10078.660Paramormyrops_kingsleyae
ENSPREG00000002867polr1b9678.073ENSPSIG00000002443POLR1B9978.073Pelodiscus_sinensis
ENSPREG00000002867polr1b10083.862ENSPMGG00000021622polr1b10083.862Periophthalmus_magnuspinnatus
ENSPREG00000002867polr1b9976.190ENSPEMG00000008619Polr1b9383.885Peromyscus_maniculatus_bairdii
ENSPREG00000002867polr1b7030.841ENSPMAG00000001164-9330.841Petromyzon_marinus
ENSPREG00000002867polr1b7532.672ENSPCIG00000009510POLR3B7832.672Phascolarctos_cinereus
ENSPREG00000002867polr1b9978.042ENSPCIG00000029738POLR1B9578.042Phascolarctos_cinereus
ENSPREG00000002867polr1b10098.765ENSPFOG00000010484polr1b10098.765Poecilia_formosa
ENSPREG00000002867polr1b7532.586ENSPLAG00000015107polr3b7932.586Poecilia_latipinna
ENSPREG00000002867polr1b10098.765ENSPLAG00000007518polr1b10098.765Poecilia_latipinna
ENSPREG00000002867polr1b10098.765ENSPMEG00000006810polr1b10098.765Poecilia_mexicana
ENSPREG00000002867polr1b9976.190ENSPPYG00000012168POLR1B9976.190Pongo_abelii
ENSPREG00000002867polr1b9967.048ENSPCAG00000013293POLR1B9967.048Procavia_capensis
ENSPREG00000002867polr1b7149.606ENSPCAG00000000881POLR3B7249.606Procavia_capensis
ENSPREG00000002867polr1b9976.102ENSPCOG00000015852POLR1B9676.102Propithecus_coquereli
ENSPREG00000002867polr1b9272.323ENSPVAG00000005727POLR1B9272.323Pteropus_vampyrus
ENSPREG00000002867polr1b8137.772ENSPVAG00000010951POLR2B7937.772Pteropus_vampyrus
ENSPREG00000002867polr1b6937.148ENSPVAG00000005861POLR3B6737.148Pteropus_vampyrus
ENSPREG00000002867polr1b10088.007ENSPNYG00000004767polr1b10088.007Pundamilia_nyererei
ENSPREG00000002867polr1b10082.099ENSPNAG00000013503polr1b9582.099Pygocentrus_nattereri
ENSPREG00000002867polr1b9970.870ENSRNOG00000018349Polr1b9970.870Rattus_norvegicus
ENSPREG00000002867polr1b9976.279ENSRBIG00000019757POLR1B9982.246Rhinopithecus_bieti
ENSPREG00000002867polr1b9842.966YPR010CRPA1359742.966Saccharomyces_cerevisiae
ENSPREG00000002867polr1b9976.279ENSSBOG00000024562POLR1B9982.065Saimiri_boliviensis_boliviensis
ENSPREG00000002867polr1b10076.903ENSSFOG00015004632polr1b10076.903Scleropages_formosus
ENSPREG00000002867polr1b10087.125ENSSMAG00000013682polr1b10087.125Scophthalmus_maximus
ENSPREG00000002867polr1b10087.831ENSSDUG00000019471polr1b10087.831Seriola_dumerili
ENSPREG00000002867polr1b6936.567ENSSARG00000013960POLR3B8336.567Sorex_araneus
ENSPREG00000002867polr1b8177.814ENSSPUG00000014298POLR1B10077.814Sphenodon_punctatus
ENSPREG00000002867polr1b10088.272ENSSPAG00000006345polr1b10088.272Stegastes_partitus
ENSPREG00000002867polr1b9977.072ENSSSCG00000008098POLR1B9973.280Sus_scrofa
ENSPREG00000002867polr1b9169.788ENSTGUG00000005237POLR1B10069.884Taeniopygia_guttata
ENSPREG00000002867polr1b10082.981ENSTRUG00000006581polr1b10082.981Takifugu_rubripes
ENSPREG00000002867polr1b9983.067ENSTNIG00000002722polr1b9983.067Tetraodon_nigroviridis
ENSPREG00000002867polr1b7341.837ENSTBEG00000017278POLR3B7141.837Tupaia_belangeri
ENSPREG00000002867polr1b9976.631ENSTTRG00000010988POLR1B9976.631Tursiops_truncatus
ENSPREG00000002867polr1b8632.979ENSTTRG00000010682POLR3B8532.979Tursiops_truncatus
ENSPREG00000002867polr1b9676.951ENSUAMG00000022527-9976.951Ursus_americanus
ENSPREG00000002867polr1b9976.631ENSUMAG00000008619POLR1B9978.360Ursus_maritimus
ENSPREG00000002867polr1b9372.047ENSVPAG00000011111POLR1B9372.047Vicugna_pacos
ENSPREG00000002867polr1b6340.268ENSVPAG00000010478POLR3B6240.268Vicugna_pacos
ENSPREG00000002867polr1b9976.190ENSVVUG00000028670POLR1B9877.302Vulpes_vulpes
ENSPREG00000002867polr1b8532.749ENSVVUG00000023101POLR3B8932.749Vulpes_vulpes
ENSPREG00000002867polr1b9974.162ENSXETG00000013749polr1b9974.162Xenopus_tropicalis
ENSPREG00000002867polr1b7432.923ENSXETG00000005721polr3b7532.923Xenopus_tropicalis
ENSPREG00000002867polr1b10097.178ENSXCOG00000006080polr1b10097.178Xiphophorus_couchianus
ENSPREG00000002867polr1b10097.443ENSXMAG00000007723polr1b10097.443Xiphophorus_maculatus

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