EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002899 (Gene tree)
Gene ID: 103462588
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 1710 bases
Position: chrLG3:20982426-20984135
Accession: 103462588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004087	DEAD	PF00270.29	8.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000004146	-	1710	XM_008405478	ENSPREP00000004087	569 (aa)	XP_008403700	UPI0004A4EBD5

Gene Model

Click here to download ENSPREG00000002899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002899	ddx28	65	30.402	ENSPREG00000015142	ddx56	70	30.402
ENSPREG00000002899	ddx28	63	30.303	ENSPREG00000016874	ddx52	52	30.303
ENSPREG00000002899	ddx28	64	30.585	ENSPREG00000016644	ddx55	61	30.585
ENSPREG00000002899	ddx28	65	32.051	ENSPREG00000002870	-	53	32.051
ENSPREG00000002899	ddx28	61	35.593	ENSPREG00000011751	ddx1	52	35.593
ENSPREG00000002899	ddx28	72	31.463	ENSPREG00000015560	ddx47	80	31.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002899	ddx28	88	48.148	ENSG00000182810	DDX28	94	48.148	Homo_sapiens
ENSPREG00000002899	ddx28	99	75.044	ENSAPOG00000000991	ddx28	98	75.044	Acanthochromis_polyacanthus
ENSPREG00000002899	ddx28	88	48.438	ENSAMEG00000019426	DDX28	94	48.438	Ailuropoda_melanoleuca
ENSPREG00000002899	ddx28	99	73.982	ENSACIG00000021615	ddx28	100	73.982	Amphilophus_citrinellus
ENSPREG00000002899	ddx28	99	75.398	ENSAOCG00000004610	ddx28	98	75.398	Amphiprion_ocellaris
ENSPREG00000002899	ddx28	99	75.044	ENSAPEG00000002143	ddx28	98	75.044	Amphiprion_percula
ENSPREG00000002899	ddx28	99	72.487	ENSATEG00000018691	ddx28	100	72.487	Anabas_testudineus
ENSPREG00000002899	ddx28	89	47.573	ENSACAG00000009755	DDX28	98	46.568	Anolis_carolinensis
ENSPREG00000002899	ddx28	97	71.993	ENSACLG00000012984	ddx28	99	71.993	Astatotilapia_calliptera
ENSPREG00000002899	ddx28	89	62.167	ENSAMXG00000005878	ddx28	92	62.167	Astyanax_mexicanus
ENSPREG00000002899	ddx28	88	49.126	ENSBTAG00000004290	DDX28	93	49.126	Bos_taurus
ENSPREG00000002899	ddx28	87	48.617	ENSCAFG00000020327	DDX28	94	48.617	Canis_familiaris
ENSPREG00000002899	ddx28	87	48.617	ENSCAFG00020019785	DDX28	94	48.617	Canis_lupus_dingo
ENSPREG00000002899	ddx28	88	49.611	ENSCHIG00000009658	DDX28	93	49.611	Capra_hircus
ENSPREG00000002899	ddx28	93	47.874	ENSCPOG00000013746	DDX28	98	47.874	Cavia_porcellus
ENSPREG00000002899	ddx28	88	48.343	ENSCSAG00000018472	DDX28	92	48.343	Chlorocebus_sabaeus
ENSPREG00000002899	ddx28	80	51.304	ENSCPBG00000012105	DDX28	81	53.598	Chrysemys_picta_bellii
ENSPREG00000002899	ddx28	65	36.074	ENSCSAVG00000006341	-	97	36.074	Ciona_savignyi
ENSPREG00000002899	ddx28	86	49.000	ENSCGRG00001024412	Ddx28	94	49.301	Cricetulus_griseus_chok1gshd
ENSPREG00000002899	ddx28	98	66.844	ENSCSEG00000011651	ddx28	99	66.844	Cynoglossus_semilaevis
ENSPREG00000002899	ddx28	98	82.679	ENSCVAG00000004044	ddx28	100	82.679	Cyprinodon_variegatus
ENSPREG00000002899	ddx28	98	59.895	ENSDARG00000060411	ddx28	99	59.895	Danio_rerio
ENSPREG00000002899	ddx28	63	54.918	ENSDNOG00000033593	DDX28	98	54.918	Dasypus_novemcinctus
ENSPREG00000002899	ddx28	88	47.461	ENSDORG00000028868	Ddx28	94	47.953	Dipodomys_ordii
ENSPREG00000002899	ddx28	79	38.312	FBgn0086130	Dbp21E2	87	37.247	Drosophila_melanogaster
ENSPREG00000002899	ddx28	89	48.743	ENSETEG00000001062	-	94	48.743	Echinops_telfairi
ENSPREG00000002899	ddx28	73	44.681	ENSEBUG00000004791	ddx28	91	40.625	Eptatretus_burgeri
ENSPREG00000002899	ddx28	88	49.031	ENSEASG00005020387	DDX28	94	49.225	Equus_asinus_asinus
ENSPREG00000002899	ddx28	88	49.225	ENSECAG00000006451	DDX28	94	49.419	Equus_caballus
ENSPREG00000002899	ddx28	72	42.857	ENSEEUG00000005017	DDX28	94	43.204	Erinaceus_europaeus
ENSPREG00000002899	ddx28	91	65.655	ENSELUG00000005302	ddx28	98	66.408	Esox_lucius
ENSPREG00000002899	ddx28	89	49.323	ENSFCAG00000012858	DDX28	94	49.323	Felis_catus
ENSPREG00000002899	ddx28	98	79.821	ENSFHEG00000012573	ddx28	99	79.821	Fundulus_heteroclitus
ENSPREG00000002899	ddx28	90	68.966	ENSGMOG00000017045	ddx28	98	68.966	Gadus_morhua
ENSPREG00000002899	ddx28	89	44.318	ENSGALG00000048700	DDX28	90	44.757	Gallus_gallus
ENSPREG00000002899	ddx28	97	92.043	ENSGAFG00000009249	ddx28	99	92.043	Gambusia_affinis
ENSPREG00000002899	ddx28	89	76.078	ENSGACG00000016367	ddx28	95	76.078	Gasterosteus_aculeatus
ENSPREG00000002899	ddx28	77	48.438	ENSGAGG00000004565	DDX28	97	48.438	Gopherus_agassizii
ENSPREG00000002899	ddx28	88	48.343	ENSGGOG00000001220	DDX28	94	48.343	Gorilla_gorilla
ENSPREG00000002899	ddx28	97	75.583	ENSHBUG00000001016	ddx28	99	75.583	Haplochromis_burtoni
ENSPREG00000002899	ddx28	99	67.019	ENSHCOG00000017590	ddx28	99	67.019	Hippocampus_comes
ENSPREG00000002899	ddx28	88	62.722	ENSIPUG00000017350	Ddx28	89	62.722	Ictalurus_punctatus
ENSPREG00000002899	ddx28	88	48.738	ENSSTOG00000002064	DDX28	94	48.738	Ictidomys_tridecemlineatus
ENSPREG00000002899	ddx28	88	47.683	ENSJJAG00000012460	-	94	47.683	Jaculus_jaculus
ENSPREG00000002899	ddx28	99	76.814	ENSKMAG00000018183	ddx28	100	76.814	Kryptolebias_marmoratus
ENSPREG00000002899	ddx28	98	71.809	ENSLBEG00000006072	ddx28	99	71.809	Labrus_bergylta
ENSPREG00000002899	ddx28	89	56.556	ENSLACG00000005578	DDX28	88	56.556	Latimeria_chalumnae
ENSPREG00000002899	ddx28	88	60.594	ENSLOCG00000017604	ddx28	91	60.594	Lepisosteus_oculatus
ENSPREG00000002899	ddx28	88	49.027	ENSLAFG00000031239	DDX28	93	49.027	Loxodonta_africana
ENSPREG00000002899	ddx28	88	48.343	ENSMMUG00000010836	DDX28	92	48.343	Macaca_mulatta
ENSPREG00000002899	ddx28	97	72.022	ENSMAMG00000020220	ddx28	97	72.022	Mastacembelus_armatus
ENSPREG00000002899	ddx28	97	75.583	ENSMZEG00005009292	ddx28	99	75.583	Maylandia_zebra
ENSPREG00000002899	ddx28	88	39.412	ENSMICG00000012346	-	92	39.412	Microcebus_murinus
ENSPREG00000002899	ddx28	88	49.609	ENSMOCG00000009815	Ddx28	94	49.609	Microtus_ochrogaster
ENSPREG00000002899	ddx28	99	69.381	ENSMMOG00000000270	ddx28	100	69.381	Mola_mola
ENSPREG00000002899	ddx28	90	49.035	ENSMODG00000005303	DDX28	94	49.035	Monodelphis_domestica
ENSPREG00000002899	ddx28	97	72.272	ENSMALG00000008864	ddx28	99	72.272	Monopterus_albus
ENSPREG00000002899	ddx28	88	48.622	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.622	Mus_caroli
ENSPREG00000002899	ddx28	88	49.216	ENSMUSG00000045538	Ddx28	93	49.216	Mus_musculus
ENSPREG00000002899	ddx28	88	49.020	MGP_PahariEiJ_G0023110	Ddx28	93	49.020	Mus_pahari
ENSPREG00000002899	ddx28	88	49.216	MGP_SPRETEiJ_G0032628	Ddx28	94	48.833	Mus_spretus
ENSPREG00000002899	ddx28	64	51.344	ENSMPUG00000006915	DDX28	92	51.482	Mustela_putorius_furo
ENSPREG00000002899	ddx28	92	47.955	ENSMLUG00000005899	DDX28	98	47.955	Myotis_lucifugus
ENSPREG00000002899	ddx28	88	49.225	ENSNGAG00000015762	Ddx28	93	49.419	Nannospalax_galili
ENSPREG00000002899	ddx28	97	75.763	ENSNBRG00000001337	ddx28	100	75.763	Neolamprologus_brichardi
ENSPREG00000002899	ddx28	97	75.224	ENSONIG00000020597	ddx28	99	75.224	Oreochromis_niloticus
ENSPREG00000002899	ddx28	88	49.027	ENSOCUG00000023074	DDX28	94	49.222	Oryctolagus_cuniculus
ENSPREG00000002899	ddx28	92	76.660	ENSORLG00000011968	ddx28	95	76.660	Oryzias_latipes
ENSPREG00000002899	ddx28	92	76.471	ENSORLG00020001951	ddx28	96	76.471	Oryzias_latipes_hni
ENSPREG00000002899	ddx28	92	76.660	ENSORLG00015023030	ddx28	96	76.660	Oryzias_latipes_hsok
ENSPREG00000002899	ddx28	99	73.451	ENSOMEG00000012445	ddx28	100	73.451	Oryzias_melastigma
ENSPREG00000002899	ddx28	88	49.130	ENSOGAG00000016895	DDX28	94	49.130	Otolemur_garnettii
ENSPREG00000002899	ddx28	77	47.884	ENSOARG00000003313	DDX28	99	47.884	Ovis_aries
ENSPREG00000002899	ddx28	88	46.589	ENSPPAG00000036971	DDX28	93	46.589	Pan_paniscus
ENSPREG00000002899	ddx28	88	49.318	ENSPPRG00000018322	DDX28	94	49.318	Panthera_pardus
ENSPREG00000002899	ddx28	88	47.563	ENSPTIG00000006444	DDX28	93	47.563	Panthera_tigris_altaica
ENSPREG00000002899	ddx28	88	48.733	ENSPTRG00000008258	DDX28	94	48.733	Pan_troglodytes
ENSPREG00000002899	ddx28	89	62.963	ENSPKIG00000021200	ddx28	94	62.963	Paramormyrops_kingsleyae
ENSPREG00000002899	ddx28	50	58.803	ENSPSIG00000001127	DDX28	94	58.803	Pelodiscus_sinensis
ENSPREG00000002899	ddx28	96	65.328	ENSPMGG00000007908	ddx28	97	65.328	Periophthalmus_magnuspinnatus
ENSPREG00000002899	ddx28	88	48.249	ENSPEMG00000003395	Ddx28	94	48.249	Peromyscus_maniculatus_bairdii
ENSPREG00000002899	ddx28	100	96.661	ENSPFOG00000020952	ddx28	100	96.661	Poecilia_formosa
ENSPREG00000002899	ddx28	99	96.613	ENSPFOG00000020838	DDX28	100	96.613	Poecilia_formosa
ENSPREG00000002899	ddx28	100	96.134	ENSPLAG00000016292	ddx28	100	96.134	Poecilia_latipinna
ENSPREG00000002899	ddx28	99	96.435	ENSPMEG00000011311	ddx28	98	96.435	Poecilia_mexicana
ENSPREG00000002899	ddx28	88	47.758	ENSPPYG00000007481	DDX28	94	47.758	Pongo_abelii
ENSPREG00000002899	ddx28	88	48.538	ENSPCOG00000024632	DDX28	94	48.538	Propithecus_coquereli
ENSPREG00000002899	ddx28	97	75.763	ENSPNYG00000018804	ddx28	99	75.763	Pundamilia_nyererei
ENSPREG00000002899	ddx28	89	61.628	ENSPNAG00000014597	ddx28	96	61.628	Pygocentrus_nattereri
ENSPREG00000002899	ddx28	88	48.249	ENSRNOG00000019817	Ddx28	93	48.249	Rattus_norvegicus
ENSPREG00000002899	ddx28	89	62.089	ENSSFOG00015010181	ddx28	93	62.089	Scleropages_formosus
ENSPREG00000002899	ddx28	89	74.464	ENSSMAG00000006831	ddx28	96	74.464	Scophthalmus_maximus
ENSPREG00000002899	ddx28	98	74.733	ENSSDUG00000003257	ddx28	98	74.733	Seriola_dumerili
ENSPREG00000002899	ddx28	98	74.021	ENSSLDG00000004513	ddx28	98	74.021	Seriola_lalandi_dorsalis
ENSPREG00000002899	ddx28	93	47.124	ENSSARG00000014169	DDX28	97	47.681	Sorex_araneus
ENSPREG00000002899	ddx28	99	74.159	ENSSPAG00000000988	ddx28	100	74.159	Stegastes_partitus
ENSPREG00000002899	ddx28	88	48.444	ENSSSCG00000026038	DDX28	94	48.638	Sus_scrofa
ENSPREG00000002899	ddx28	92	70.699	ENSTRUG00000007815	ddx28	96	70.699	Takifugu_rubripes
ENSPREG00000002899	ddx28	88	72.763	ENSTNIG00000011352	ddx28	99	72.763	Tetraodon_nigroviridis
ENSPREG00000002899	ddx28	71	60.094	ENSTBEG00000017695	DDX28	75	60.094	Tupaia_belangeri
ENSPREG00000002899	ddx28	88	48.249	ENSUAMG00000016116	DDX28	93	48.538	Ursus_americanus
ENSPREG00000002899	ddx28	75	50.227	ENSUMAG00000019200	DDX28	88	50.569	Ursus_maritimus
ENSPREG00000002899	ddx28	71	43.750	ENSVVUG00000012876	DDX28	81	43.750	Vulpes_vulpes
ENSPREG00000002899	ddx28	87	47.485	ENSXETG00000005435	ddx28	97	47.485	Xenopus_tropicalis
ENSPREG00000002899	ddx28	99	94.118	ENSXCOG00000012364	ddx28	99	94.118	Xiphophorus_couchianus
ENSPREG00000002899	ddx28	93	91.477	ENSXMAG00000019603	ddx28	96	91.477	Xiphophorus_maculatus