EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000002909 (Gene tree)
Gene ID: 103464896
Gene Symbol: gnl3
Alias: -
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4283 bases
Position: chrLG5:20854109-20858391
Accession: 103464896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004179	GN3L_Grn1	PF08701.11	4.7e-21	1	1
ENSPREP00000004179	MMR_HSR1	PF01926.23	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000004238	-	1566	XM_008409291	ENSPREP00000004179	521 (aa)	XP_008407513	-

Gene Model

Click here to download ENSPREG00000002909's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000002909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000002909	gnl3	74	43.511	ENSPREG00000021994	gnl3l	72	43.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000002909	gnl3	99	43.920	ENSG00000163938	GNL3	100	50.735	Homo_sapiens
ENSPREG00000002909	gnl3	99	66.014	ENSAPOG00000004048	gnl3	99	68.478	Acanthochromis_polyacanthus
ENSPREG00000002909	gnl3	99	42.162	ENSAMEG00000008456	GNL3	99	42.162	Ailuropoda_melanoleuca
ENSPREG00000002909	gnl3	99	68.939	ENSACIG00000000545	gnl3	99	69.129	Amphilophus_citrinellus
ENSPREG00000002909	gnl3	99	67.450	ENSAOCG00000012879	gnl3	99	68.297	Amphiprion_ocellaris
ENSPREG00000002909	gnl3	99	68.592	ENSAPEG00000006146	gnl3	99	68.773	Amphiprion_percula
ENSPREG00000002909	gnl3	99	66.123	ENSATEG00000024242	gnl3	99	66.123	Anabas_testudineus
ENSPREG00000002909	gnl3	82	49.002	ENSAPLG00000005171	GNL3	99	44.751	Anas_platyrhynchos
ENSPREG00000002909	gnl3	99	45.735	ENSACAG00000007357	GNL3	99	46.279	Anolis_carolinensis
ENSPREG00000002909	gnl3	99	43.613	ENSANAG00000033209	GNL3	99	43.796	Aotus_nancymaae
ENSPREG00000002909	gnl3	99	71.756	ENSACLG00000007381	gnl3	99	72.296	Astatotilapia_calliptera
ENSPREG00000002909	gnl3	99	50.984	ENSAMXG00000020880	gnl3	99	50.984	Astyanax_mexicanus
ENSPREG00000002909	gnl3	87	48.626	ENSBTAG00000014549	GNL3	99	45.324	Bos_taurus
ENSPREG00000002909	gnl3	99	43.510	ENSCJAG00000006864	-	99	44.241	Callithrix_jacchus
ENSPREG00000002909	gnl3	99	43.510	ENSCJAG00000044256	-	99	44.241	Callithrix_jacchus
ENSPREG00000002909	gnl3	90	46.341	ENSCAFG00000009004	GNL3	99	43.268	Canis_familiaris
ENSPREG00000002909	gnl3	90	46.545	ENSCAFG00020002613	GNL3	92	46.450	Canis_lupus_dingo
ENSPREG00000002909	gnl3	88	48.203	ENSCHIG00000022181	GNL3	99	45.554	Capra_hircus
ENSPREG00000002909	gnl3	99	42.805	ENSTSYG00000006851	GNL3	99	43.169	Carlito_syrichta
ENSPREG00000002909	gnl3	99	42.617	ENSCPOG00000000282	GNL3	99	42.537	Cavia_porcellus
ENSPREG00000002909	gnl3	99	44.241	ENSCCAG00000033281	GNL3	99	44.241	Cebus_capucinus
ENSPREG00000002909	gnl3	99	43.920	ENSCATG00000040886	GNL3	99	43.920	Cercocebus_atys
ENSPREG00000002909	gnl3	99	41.392	ENSCLAG00000010109	-	99	42.287	Chinchilla_lanigera
ENSPREG00000002909	gnl3	99	43.705	ENSCSAG00000013315	GNL3	99	43.920	Chlorocebus_sabaeus
ENSPREG00000002909	gnl3	90	44.467	ENSCHOG00000002726	GNL3	99	42.096	Choloepus_hoffmanni
ENSPREG00000002909	gnl3	78	46.296	ENSCPBG00000018330	-	95	47.332	Chrysemys_picta_bellii
ENSPREG00000002909	gnl3	98	43.486	ENSCANG00000039969	GNL3	99	43.486	Colobus_angolensis_palliatus
ENSPREG00000002909	gnl3	99	43.831	ENSCGRG00001020950	Gnl3	99	44.015	Cricetulus_griseus_chok1gshd
ENSPREG00000002909	gnl3	99	43.831	ENSCGRG00000015225	Gnl3	99	44.015	Cricetulus_griseus_crigri
ENSPREG00000002909	gnl3	99	59.347	ENSCSEG00000005009	gnl3	99	59.273	Cynoglossus_semilaevis
ENSPREG00000002909	gnl3	99	76.007	ENSCVAG00000010679	gnl3	99	76.007	Cyprinodon_variegatus
ENSPREG00000002909	gnl3	99	50.540	ENSDARG00000006219	gnl3	99	53.058	Danio_rerio
ENSPREG00000002909	gnl3	99	42.626	ENSDNOG00000001037	GNL3	99	44.086	Dasypus_novemcinctus
ENSPREG00000002909	gnl3	99	43.785	ENSDORG00000000674	Gnl3	99	43.970	Dipodomys_ordii
ENSPREG00000002909	gnl3	90	77.273	ENSETEG00000016534	-	87	65.672	Echinops_telfairi
ENSPREG00000002909	gnl3	99	44.485	ENSEASG00005014636	GNL3	99	44.485	Equus_asinus_asinus
ENSPREG00000002909	gnl3	99	42.707	ENSECAG00000014850	GNL3	99	42.655	Equus_caballus
ENSPREG00000002909	gnl3	99	43.761	ENSEEUG00000004427	GNL3	99	44.123	Erinaceus_europaeus
ENSPREG00000002909	gnl3	99	61.002	ENSELUG00000008767	gnl3	99	61.360	Esox_lucius
ENSPREG00000002909	gnl3	99	43.772	ENSFCAG00000015719	GNL3	99	43.950	Felis_catus
ENSPREG00000002909	gnl3	99	48.029	ENSFALG00000008957	GNL3	99	48.294	Ficedula_albicollis
ENSPREG00000002909	gnl3	99	42.883	ENSFDAG00000020679	GNL3	99	43.119	Fukomys_damarensis
ENSPREG00000002909	gnl3	99	76.740	ENSFHEG00000020897	gnl3	99	77.289	Fundulus_heteroclitus
ENSPREG00000002909	gnl3	99	58.318	ENSGMOG00000001745	gnl3	100	58.564	Gadus_morhua
ENSPREG00000002909	gnl3	99	44.035	ENSGALG00000001613	GNL3	99	44.737	Gallus_gallus
ENSPREG00000002909	gnl3	100	79.924	ENSGAFG00000007184	gnl3	100	79.924	Gambusia_affinis
ENSPREG00000002909	gnl3	99	61.622	ENSGACG00000000309	gnl3	99	63.538	Gasterosteus_aculeatus
ENSPREG00000002909	gnl3	78	46.528	ENSGAGG00000021579	-	95	46.991	Gopherus_agassizii
ENSPREG00000002909	gnl3	99	43.739	ENSGGOG00000011444	GNL3	99	43.739	Gorilla_gorilla
ENSPREG00000002909	gnl3	99	68.364	ENSHBUG00000001340	gnl3	99	69.273	Haplochromis_burtoni
ENSPREG00000002909	gnl3	99	41.530	ENSHGLG00000018299	GNL3	99	41.530	Heterocephalus_glaber_female
ENSPREG00000002909	gnl3	99	56.036	ENSHCOG00000009446	gnl3	99	59.455	Hippocampus_comes
ENSPREG00000002909	gnl3	99	49.534	ENSIPUG00000023677	gnl3	99	49.534	Ictalurus_punctatus
ENSPREG00000002909	gnl3	99	43.478	ENSSTOG00000000356	GNL3	99	43.841	Ictidomys_tridecemlineatus
ENSPREG00000002909	gnl3	99	45.421	ENSJJAG00000021993	Gnl3	99	45.238	Jaculus_jaculus
ENSPREG00000002909	gnl3	99	71.193	ENSKMAG00000005965	gnl3	99	71.193	Kryptolebias_marmoratus
ENSPREG00000002909	gnl3	99	67.156	ENSLBEG00000011394	gnl3	99	67.156	Labrus_bergylta
ENSPREG00000002909	gnl3	86	51.923	ENSLACG00000001259	GNL3	99	46.975	Latimeria_chalumnae
ENSPREG00000002909	gnl3	99	48.854	ENSLOCG00000010542	gnl3	99	50.089	Lepisosteus_oculatus
ENSPREG00000002909	gnl3	91	44.807	ENSLAFG00000016056	GNL3	87	45.325	Loxodonta_africana
ENSPREG00000002909	gnl3	99	44.102	ENSMFAG00000000613	GNL3	99	44.203	Macaca_fascicularis
ENSPREG00000002909	gnl3	98	43.382	ENSMMUG00000012511	GNL3	99	43.486	Macaca_mulatta
ENSPREG00000002909	gnl3	98	43.566	ENSMNEG00000041979	GNL3	99	43.670	Macaca_nemestrina
ENSPREG00000002909	gnl3	99	44.102	ENSMLEG00000027696	GNL3	99	44.102	Mandrillus_leucophaeus
ENSPREG00000002909	gnl3	99	68.364	ENSMAMG00000008904	gnl3	99	68.364	Mastacembelus_armatus
ENSPREG00000002909	gnl3	99	68.058	ENSMZEG00005014857	gnl3	99	69.091	Maylandia_zebra
ENSPREG00000002909	gnl3	88	66.947	ENSMZEG00005014957	-	98	66.194	Maylandia_zebra
ENSPREG00000002909	gnl3	86	41.015	ENSMGAG00000000848	GNL3	81	39.721	Meleagris_gallopavo
ENSPREG00000002909	gnl3	99	42.963	ENSMAUG00000020178	Gnl3	99	43.866	Mesocricetus_auratus
ENSPREG00000002909	gnl3	99	42.342	ENSMICG00000016373	GNL3	99	42.162	Microcebus_murinus
ENSPREG00000002909	gnl3	99	43.253	ENSMOCG00000018437	Gnl3	99	43.253	Microtus_ochrogaster
ENSPREG00000002909	gnl3	99	65.378	ENSMMOG00000002815	gnl3	94	71.488	Mola_mola
ENSPREG00000002909	gnl3	88	48.319	ENSMODG00000011257	GNL3	88	47.951	Monodelphis_domestica
ENSPREG00000002909	gnl3	99	64.952	ENSMALG00000021043	gnl3	96	69.182	Monopterus_albus
ENSPREG00000002909	gnl3	99	43.119	MGP_CAROLIEiJ_G0019063	Gnl3	99	43.119	Mus_caroli
ENSPREG00000002909	gnl3	88	46.541	ENSMUSG00000042354	Gnl3	100	53.378	Mus_musculus
ENSPREG00000002909	gnl3	99	43.303	MGP_PahariEiJ_G0030080	Gnl3	99	43.853	Mus_pahari
ENSPREG00000002909	gnl3	99	44.102	MGP_SPRETEiJ_G0019948	Gnl3	99	43.920	Mus_spretus
ENSPREG00000002909	gnl3	99	42.495	ENSMPUG00000016777	GNL3	99	43.525	Mustela_putorius_furo
ENSPREG00000002909	gnl3	99	43.876	ENSMLUG00000000728	GNL3	99	44.220	Myotis_lucifugus
ENSPREG00000002909	gnl3	99	42.413	ENSNGAG00000017202	Gnl3	99	42.413	Nannospalax_galili
ENSPREG00000002909	gnl3	88	65.833	ENSNBRG00000013161	gnl3	99	65.051	Neolamprologus_brichardi
ENSPREG00000002909	gnl3	99	44.000	ENSNLEG00000007173	GNL3	99	44.000	Nomascus_leucogenys
ENSPREG00000002909	gnl3	88	39.046	ENSMEUG00000011502	-	99	39.046	Notamacropus_eugenii
ENSPREG00000002909	gnl3	78	39.141	ENSOPRG00000009356	GNL3	95	38.979	Ochotona_princeps
ENSPREG00000002909	gnl3	99	42.883	ENSODEG00000009492	GNL3	99	42.883	Octodon_degus
ENSPREG00000002909	gnl3	99	68.240	ENSONIG00000019335	gnl3	99	68.966	Oreochromis_niloticus
ENSPREG00000002909	gnl3	99	45.109	ENSOANG00000013437	GNL3	99	44.265	Ornithorhynchus_anatinus
ENSPREG00000002909	gnl3	99	42.364	ENSOCUG00000009841	GNL3	99	42.599	Oryctolagus_cuniculus
ENSPREG00000002909	gnl3	99	61.439	ENSORLG00000016030	gnl3	99	63.704	Oryzias_latipes
ENSPREG00000002909	gnl3	99	61.255	ENSORLG00020014358	gnl3	99	63.519	Oryzias_latipes_hni
ENSPREG00000002909	gnl3	99	62.432	ENSORLG00015009489	gnl3	99	63.284	Oryzias_latipes_hsok
ENSPREG00000002909	gnl3	99	64.312	ENSOMEG00000005462	gnl3	99	64.378	Oryzias_melastigma
ENSPREG00000002909	gnl3	99	43.494	ENSOGAG00000004101	GNL3	99	43.672	Otolemur_garnettii
ENSPREG00000002909	gnl3	88	48.233	ENSOARG00000002470	GNL3	99	45.242	Ovis_aries
ENSPREG00000002909	gnl3	99	44.102	ENSPPAG00000019253	GNL3	99	44.102	Pan_paniscus
ENSPREG00000002909	gnl3	99	42.652	ENSPPRG00000009550	GNL3	99	42.832	Panthera_pardus
ENSPREG00000002909	gnl3	99	42.473	ENSPTIG00000009356	GNL3	99	42.652	Panthera_tigris_altaica
ENSPREG00000002909	gnl3	99	44.102	ENSPTRG00000015009	GNL3	99	44.102	Pan_troglodytes
ENSPREG00000002909	gnl3	99	42.391	ENSPANG00000016579	GNL3	99	42.391	Papio_anubis
ENSPREG00000002909	gnl3	99	54.628	ENSPKIG00000024295	gnl3	99	55.616	Paramormyrops_kingsleyae
ENSPREG00000002909	gnl3	98	47.653	ENSPSIG00000011486	GNL3	99	48.375	Pelodiscus_sinensis
ENSPREG00000002909	gnl3	99	60.766	ENSPMGG00000008210	gnl3	99	61.384	Periophthalmus_magnuspinnatus
ENSPREG00000002909	gnl3	99	43.278	ENSPEMG00000017577	Gnl3	99	43.646	Peromyscus_maniculatus_bairdii
ENSPREG00000002909	gnl3	88	48.211	ENSPCIG00000018642	GNL3	85	47.658	Phascolarctos_cinereus
ENSPREG00000002909	gnl3	99	85.009	ENSPFOG00000017601	gnl3	99	84.854	Poecilia_formosa
ENSPREG00000002909	gnl3	99	88.257	ENSPLAG00000016968	gnl3	99	88.257	Poecilia_latipinna
ENSPREG00000002909	gnl3	100	93.928	ENSPMEG00000018775	gnl3	100	93.928	Poecilia_mexicana
ENSPREG00000002909	gnl3	99	43.400	ENSPPYG00000013800	GNL3	99	43.400	Pongo_abelii
ENSPREG00000002909	gnl3	80	45.330	ENSPCAG00000002006	GNL3	79	45.558	Procavia_capensis
ENSPREG00000002909	gnl3	99	42.806	ENSPCOG00000026637	GNL3	99	42.679	Propithecus_coquereli
ENSPREG00000002909	gnl3	99	42.294	ENSPVAG00000012586	GNL3	99	42.652	Pteropus_vampyrus
ENSPREG00000002909	gnl3	91	64.837	ENSPNYG00000005130	gnl3	98	64.706	Pundamilia_nyererei
ENSPREG00000002909	gnl3	99	49.733	ENSPNAG00000013096	gnl3	99	50.887	Pygocentrus_nattereri
ENSPREG00000002909	gnl3	99	43.818	ENSRNOG00000028461	Gnl3	99	44.646	Rattus_norvegicus
ENSPREG00000002909	gnl3	99	43.841	ENSRBIG00000031778	GNL3	99	43.841	Rhinopithecus_bieti
ENSPREG00000002909	gnl3	99	43.841	ENSRROG00000030086	GNL3	99	43.841	Rhinopithecus_roxellana
ENSPREG00000002909	gnl3	99	42.883	ENSSBOG00000019990	GNL3	99	43.063	Saimiri_boliviensis_boliviensis
ENSPREG00000002909	gnl3	88	47.368	ENSSHAG00000006141	GNL3	88	46.939	Sarcophilus_harrisii
ENSPREG00000002909	gnl3	99	52.669	ENSSFOG00015021228	gnl3	99	55.296	Scleropages_formosus
ENSPREG00000002909	gnl3	99	65.392	ENSSMAG00000006662	gnl3	99	65.392	Scophthalmus_maximus
ENSPREG00000002909	gnl3	99	66.788	ENSSDUG00000000972	gnl3	99	67.336	Seriola_dumerili
ENSPREG00000002909	gnl3	99	66.788	ENSSLDG00000008692	gnl3	91	67.336	Seriola_lalandi_dorsalis
ENSPREG00000002909	gnl3	90	43.927	ENSSARG00000002226	GNL3	90	44.332	Sorex_araneus
ENSPREG00000002909	gnl3	99	46.384	ENSSPUG00000003582	GNL3	99	47.247	Sphenodon_punctatus
ENSPREG00000002909	gnl3	99	67.695	ENSSPAG00000020180	gnl3	99	68.784	Stegastes_partitus
ENSPREG00000002909	gnl3	99	42.576	ENSSSCG00000011449	GNL3	99	43.885	Sus_scrofa
ENSPREG00000002909	gnl3	86	50.531	ENSTGUG00000005774	GNL3	99	46.964	Taeniopygia_guttata
ENSPREG00000002909	gnl3	99	59.636	ENSTRUG00000005552	gnl3	100	59.410	Takifugu_rubripes
ENSPREG00000002909	gnl3	99	59.049	ENSTNIG00000007263	gnl3	99	59.307	Tetraodon_nigroviridis
ENSPREG00000002909	gnl3	85	44.301	ENSTBEG00000017518	GNL3	99	40.993	Tupaia_belangeri
ENSPREG00000002909	gnl3	99	43.866	ENSUAMG00000012347	GNL3	99	43.866	Ursus_americanus
ENSPREG00000002909	gnl3	99	42.523	ENSUMAG00000021001	GNL3	99	42.523	Ursus_maritimus
ENSPREG00000002909	gnl3	99	44.037	ENSVVUG00000024536	-	99	44.037	Vulpes_vulpes
ENSPREG00000002909	gnl3	100	76.482	ENSXCOG00000018425	gnl3	99	83.726	Xiphophorus_couchianus
ENSPREG00000002909	gnl3	99	85.321	ENSXMAG00000022565	gnl3	99	85.321	Xiphophorus_maculatus