EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003211 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6311 bases
Position: chrKK215311.1:189929-196239
Accession: 103460568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004605	zf-C2H2	PF00096.26	5.6e-13	1	2
ENSPREP00000004605	zf-C2H2	PF00096.26	5.6e-13	2	2
ENSPREP00000004605	zf-met	PF12874.7	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000004669	-	1050	XM_008402802	ENSPREP00000004605	349 (aa)	XP_008401024	-

Gene Model

Click here to download ENSPREG00000003211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003211	-	94	73.171	ENSPREG00000015073	prdm12b	95	73.984
ENSPREG00000003211	-	70	42.529	ENSPREG00000018366	prdm5	98	42.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003211	-	90	78.049	ENSG00000130711	PRDM12	96	72.603	Homo_sapiens
ENSPREG00000003211	-	94	72.193	ENSAPOG00000016051	prdm12b	95	72.995	Acanthochromis_polyacanthus
ENSPREG00000003211	-	97	66.120	ENSAPOG00000018234	-	98	66.120	Acanthochromis_polyacanthus
ENSPREG00000003211	-	89	78.683	ENSAMEG00000016234	PRDM12	96	78.997	Ailuropoda_melanoleuca
ENSPREG00000003211	-	94	80.501	ENSACIG00000005193	-	95	82.173	Amphilophus_citrinellus
ENSPREG00000003211	-	94	74.795	ENSACIG00000019578	prdm12b	95	74.795	Amphilophus_citrinellus
ENSPREG00000003211	-	94	73.569	ENSAOCG00000015040	prdm12b	95	74.387	Amphiprion_ocellaris
ENSPREG00000003211	-	97	79.834	ENSAPEG00000022849	-	98	80.441	Amphiprion_percula
ENSPREG00000003211	-	94	74.176	ENSAPEG00000015092	prdm12b	95	75.000	Amphiprion_percula
ENSPREG00000003211	-	96	75.457	ENSATEG00000014595	-	92	81.288	Anabas_testudineus
ENSPREG00000003211	-	93	76.331	ENSANAG00000020616	PRDM12	96	76.331	Aotus_nancymaae
ENSPREG00000003211	-	97	77.835	ENSACLG00000007631	-	99	77.835	Astatotilapia_calliptera
ENSPREG00000003211	-	94	78.947	ENSACLG00000011876	prdm12b	95	78.947	Astatotilapia_calliptera
ENSPREG00000003211	-	96	75.068	ENSAMXG00000033665	prdm12b	97	75.068	Astyanax_mexicanus
ENSPREG00000003211	-	96	77.077	ENSAMXG00000008540	PRDM12	97	77.077	Astyanax_mexicanus
ENSPREG00000003211	-	90	77.982	ENSBTAG00000023797	PRDM12	96	74.095	Bos_taurus
ENSPREG00000003211	-	90	78.049	ENSCJAG00000020540	PRDM12	96	74.022	Callithrix_jacchus
ENSPREG00000003211	-	81	80.743	ENSCAFG00000023076	PRDM12	96	79.221	Canis_familiaris
ENSPREG00000003211	-	90	77.982	ENSCAFG00020024046	PRDM12	96	73.481	Canis_lupus_dingo
ENSPREG00000003211	-	90	77.982	ENSCHIG00000025005	PRDM12	96	73.889	Capra_hircus
ENSPREG00000003211	-	85	77.170	ENSCPOG00000005901	PRDM12	91	77.170	Cavia_porcellus
ENSPREG00000003211	-	90	78.049	ENSCCAG00000037485	PRDM12	96	73.407	Cebus_capucinus
ENSPREG00000003211	-	90	78.049	ENSCATG00000020327	PRDM12	96	73.407	Cercocebus_atys
ENSPREG00000003211	-	91	77.273	ENSCLAG00000005499	PRDM12	87	77.273	Chinchilla_lanigera
ENSPREG00000003211	-	90	78.049	ENSCSAG00000014756	PRDM12	96	73.204	Chlorocebus_sabaeus
ENSPREG00000003211	-	94	77.326	ENSCPBG00000022628	PRDM12	94	77.326	Chrysemys_picta_bellii
ENSPREG00000003211	-	90	77.982	ENSCGRG00001015005	Prdm12	96	73.077	Cricetulus_griseus_chok1gshd
ENSPREG00000003211	-	94	79.787	ENSCVAG00000000944	-	96	79.787	Cyprinodon_variegatus
ENSPREG00000003211	-	94	73.757	ENSCVAG00000017166	prdm12b	95	75.414	Cyprinodon_variegatus
ENSPREG00000003211	-	96	77.260	ENSDARG00000007430	prdm12b	97	77.260	Danio_rerio
ENSPREG00000003211	-	90	77.508	ENSDNOG00000042302	PRDM12	97	73.684	Dasypus_novemcinctus
ENSPREG00000003211	-	84	62.763	ENSEBUG00000016780	prdm12b	71	64.264	Eptatretus_burgeri
ENSPREG00000003211	-	93	76.627	ENSEASG00005008472	PRDM12	96	74.167	Equus_asinus_asinus
ENSPREG00000003211	-	93	76.627	ENSECAG00000005933	PRDM12	96	74.167	Equus_caballus
ENSPREG00000003211	-	90	78.704	ENSELUG00000013674	PRDM12	90	78.704	Esox_lucius
ENSPREG00000003211	-	94	74.515	ENSELUG00000009905	prdm12b	95	74.515	Esox_lucius
ENSPREG00000003211	-	90	77.982	ENSFCAG00000043086	PRDM12	96	73.684	Felis_catus
ENSPREG00000003211	-	94	78.488	ENSFALG00000001445	PRDM12	84	78.488	Ficedula_albicollis
ENSPREG00000003211	-	94	84.488	ENSFHEG00000007746	-	94	84.298	Fundulus_heteroclitus
ENSPREG00000003211	-	94	73.204	ENSFHEG00000003944	prdm12b	95	74.033	Fundulus_heteroclitus
ENSPREG00000003211	-	83	83.721	ENSGMOG00000011797	prdm12b	90	79.456	Gadus_morhua
ENSPREG00000003211	-	94	78.488	ENSGALG00000003895	PRDM12	94	78.488	Gallus_gallus
ENSPREG00000003211	-	94	73.973	ENSGAFG00000010827	prdm12b	95	74.795	Gambusia_affinis
ENSPREG00000003211	-	94	74.931	ENSGACG00000016713	prdm12b	95	74.931	Gasterosteus_aculeatus
ENSPREG00000003211	-	94	77.326	ENSGAGG00000014083	PRDM12	94	77.326	Gopherus_agassizii
ENSPREG00000003211	-	90	77.744	ENSGGOG00000010568	PRDM12	96	72.527	Gorilla_gorilla
ENSPREG00000003211	-	97	77.835	ENSHBUG00000022537	-	92	77.835	Haplochromis_burtoni
ENSPREG00000003211	-	94	74.931	ENSHBUG00000022878	prdm12b	95	74.931	Haplochromis_burtoni
ENSPREG00000003211	-	91	76.970	ENSHGLG00000013939	PRDM12	96	72.727	Heterocephalus_glaber_female
ENSPREG00000003211	-	83	78.549	ENSHCOG00000003663	prdm12b	97	68.462	Hippocampus_comes
ENSPREG00000003211	-	90	84.013	ENSHCOG00000021167	-	89	84.013	Hippocampus_comes
ENSPREG00000003211	-	94	75.556	ENSIPUG00000017053	prdm12b	95	75.556	Ictalurus_punctatus
ENSPREG00000003211	-	97	72.358	ENSIPUG00000019544	PRDM12	98	72.358	Ictalurus_punctatus
ENSPREG00000003211	-	90	77.982	ENSSTOG00000005986	PRDM12	83	77.982	Ictidomys_tridecemlineatus
ENSPREG00000003211	-	90	77.982	ENSJJAG00000005424	Prdm12	96	77.982	Jaculus_jaculus
ENSPREG00000003211	-	94	67.172	ENSKMAG00000016921	prdm12b	96	67.929	Kryptolebias_marmoratus
ENSPREG00000003211	-	90	90.432	ENSKMAG00000021205	-	96	85.591	Kryptolebias_marmoratus
ENSPREG00000003211	-	94	72.973	ENSLBEG00000017769	prdm12b	95	73.243	Labrus_bergylta
ENSPREG00000003211	-	90	79.339	ENSLBEG00000007776	-	91	80.716	Labrus_bergylta
ENSPREG00000003211	-	94	77.616	ENSLACG00000017560	PRDM12	94	77.616	Latimeria_chalumnae
ENSPREG00000003211	-	94	76.620	ENSLOCG00000005429	prdm12b	95	77.684	Lepisosteus_oculatus
ENSPREG00000003211	-	90	76.577	ENSLAFG00000006979	PRDM12	90	74.783	Loxodonta_africana
ENSPREG00000003211	-	96	71.507	ENSMFAG00000040322	PRDM12	96	72.877	Macaca_fascicularis
ENSPREG00000003211	-	90	78.049	ENSMNEG00000037234	PRDM12	96	73.407	Macaca_nemestrina
ENSPREG00000003211	-	96	78.649	ENSMAMG00000018988	-	97	80.811	Mastacembelus_armatus
ENSPREG00000003211	-	94	73.569	ENSMAMG00000013212	prdm12b	95	74.114	Mastacembelus_armatus
ENSPREG00000003211	-	97	77.436	ENSMZEG00005000415	PRDM12	99	77.436	Maylandia_zebra
ENSPREG00000003211	-	92	78.402	ENSMGAG00000005438	PRDM12	93	78.402	Meleagris_gallopavo
ENSPREG00000003211	-	96	73.278	ENSMAUG00000013040	Prdm12	96	73.278	Mesocricetus_auratus
ENSPREG00000003211	-	90	77.982	ENSMICG00000015480	PRDM12	96	73.611	Microcebus_murinus
ENSPREG00000003211	-	95	75.072	ENSMOCG00000021026	Prdm12	90	76.401	Microtus_ochrogaster
ENSPREG00000003211	-	94	77.101	ENSMODG00000012108	PRDM12	94	77.101	Monodelphis_domestica
ENSPREG00000003211	-	80	75.399	ENSMALG00000021901	prdm12b	96	75.399	Monopterus_albus
ENSPREG00000003211	-	90	77.982	MGP_CAROLIEiJ_G0023414	Prdm12	96	73.278	Mus_caroli
ENSPREG00000003211	-	90	77.982	ENSMUSG00000079466	Prdm12	96	73.278	Mus_musculus
ENSPREG00000003211	-	90	77.982	MGP_PahariEiJ_G0024871	Prdm12	96	73.278	Mus_pahari
ENSPREG00000003211	-	90	77.982	MGP_SPRETEiJ_G0024331	Prdm12	96	73.278	Mus_spretus
ENSPREG00000003211	-	87	79.430	ENSNGAG00000018480	Prdm12	95	76.385	Nannospalax_galili
ENSPREG00000003211	-	97	79.718	ENSNBRG00000024312	-	99	79.718	Neolamprologus_brichardi
ENSPREG00000003211	-	94	74.317	ENSNBRG00000006727	prdm12b	95	74.521	Neolamprologus_brichardi
ENSPREG00000003211	-	94	68.986	ENSMEUG00000003828	PRDM12	94	68.986	Notamacropus_eugenii
ENSPREG00000003211	-	90	77.676	ENSOPRG00000008680	PRDM12	96	77.676	Ochotona_princeps
ENSPREG00000003211	-	93	75.811	ENSODEG00000016282	PRDM12	62	75.811	Octodon_degus
ENSPREG00000003211	-	58	79.724	ENSOANG00000001043	PRDM12	100	79.724	Ornithorhynchus_anatinus
ENSPREG00000003211	-	86	77.636	ENSOCUG00000008241	PRDM12	95	77.636	Oryctolagus_cuniculus
ENSPREG00000003211	-	94	73.713	ENSORLG00000007114	prdm12b	95	73.984	Oryzias_latipes
ENSPREG00000003211	-	94	78.191	ENSORLG00000017558	-	96	78.042	Oryzias_latipes
ENSPREG00000003211	-	94	72.507	ENSORLG00020019565	prdm12b	95	73.046	Oryzias_latipes_hni
ENSPREG00000003211	-	94	77.984	ENSORLG00020013167	-	96	77.836	Oryzias_latipes_hni
ENSPREG00000003211	-	94	77.926	ENSORLG00015003435	-	96	77.778	Oryzias_latipes_hsok
ENSPREG00000003211	-	94	72.283	ENSORLG00015007621	prdm12b	95	73.370	Oryzias_latipes_hsok
ENSPREG00000003211	-	97	80.811	ENSOMEG00000007762	-	99	80.811	Oryzias_melastigma
ENSPREG00000003211	-	94	71.237	ENSOMEG00000004134	prdm12b	95	71.505	Oryzias_melastigma
ENSPREG00000003211	-	90	77.982	ENSOGAG00000007557	PRDM12	95	77.982	Otolemur_garnettii
ENSPREG00000003211	-	78	75.524	ENSPPAG00000031506	-	93	75.524	Pan_paniscus
ENSPREG00000003211	-	96	67.787	ENSPPRG00000023024	PRDM12	88	67.787	Panthera_pardus
ENSPREG00000003211	-	90	78.049	ENSPTRG00000043324	-	96	72.802	Pan_troglodytes
ENSPREG00000003211	-	90	78.049	ENSPTRG00000021475	PRDM12	96	72.802	Pan_troglodytes
ENSPREG00000003211	-	90	78.049	ENSPANG00000025967	PRDM12	96	73.407	Papio_anubis
ENSPREG00000003211	-	94	75.967	ENSPKIG00000007228	prdm12b	95	75.967	Paramormyrops_kingsleyae
ENSPREG00000003211	-	87	75.926	ENSPKIG00000004305	PRDM12	90	76.235	Paramormyrops_kingsleyae
ENSPREG00000003211	-	94	76.522	ENSPSIG00000006739	PRDM12	95	76.522	Pelodiscus_sinensis
ENSPREG00000003211	-	94	74.022	ENSPMGG00000008867	prdm12b	95	75.419	Periophthalmus_magnuspinnatus
ENSPREG00000003211	-	96	76.203	ENSPMGG00000002356	-	97	76.738	Periophthalmus_magnuspinnatus
ENSPREG00000003211	-	93	76.331	ENSPEMG00000009969	Prdm12	90	76.331	Peromyscus_maniculatus_bairdii
ENSPREG00000003211	-	94	77.391	ENSPCIG00000024119	PRDM12	94	77.391	Phascolarctos_cinereus
ENSPREG00000003211	-	94	75.556	ENSPFOG00000019841	prdm12b	95	75.556	Poecilia_formosa
ENSPREG00000003211	-	94	73.370	ENSPLAG00000016626	prdm12b	95	73.913	Poecilia_latipinna
ENSPREG00000003211	-	95	72.533	ENSPMEG00000016698	prdm12b	97	73.913	Poecilia_mexicana
ENSPREG00000003211	-	94	75.652	ENSPPYG00000019694	PRDM12	95	75.652	Pongo_abelii
ENSPREG00000003211	-	90	77.982	ENSPCOG00000022255	PRDM12	96	73.352	Propithecus_coquereli
ENSPREG00000003211	-	90	77.982	ENSPVAG00000001511	PRDM12	96	73.077	Pteropus_vampyrus
ENSPREG00000003211	-	97	77.436	ENSPNYG00000013589	-	99	77.436	Pundamilia_nyererei
ENSPREG00000003211	-	94	74.521	ENSPNYG00000009607	prdm12b	95	74.521	Pundamilia_nyererei
ENSPREG00000003211	-	96	74.797	ENSPNAG00000024532	prdm12b	97	76.022	Pygocentrus_nattereri
ENSPREG00000003211	-	90	77.946	ENSPNAG00000013396	PRDM12	91	79.456	Pygocentrus_nattereri
ENSPREG00000003211	-	90	77.982	ENSRNOG00000009218	Prdm12	96	73.278	Rattus_norvegicus
ENSPREG00000003211	-	87	77.778	ENSRBIG00000042712	PRDM12	95	71.549	Rhinopithecus_bieti
ENSPREG00000003211	-	88	78.438	ENSRROG00000043554	PRDM12	96	78.438	Rhinopithecus_roxellana
ENSPREG00000003211	-	94	76.879	ENSSHAG00000015972	PRDM12	94	76.879	Sarcophilus_harrisii
ENSPREG00000003211	-	94	70.976	ENSSMAG00000003754	prdm12b	95	71.504	Scophthalmus_maximus
ENSPREG00000003211	-	96	77.746	ENSSDUG00000019071	-	92	81.138	Seriola_dumerili
ENSPREG00000003211	-	94	73.585	ENSSDUG00000023498	prdm12b	95	73.854	Seriola_dumerili
ENSPREG00000003211	-	96	81.429	ENSSLDG00000013562	-	97	82.571	Seriola_lalandi_dorsalis
ENSPREG00000003211	-	94	73.585	ENSSLDG00000009557	prdm12b	95	73.854	Seriola_lalandi_dorsalis
ENSPREG00000003211	-	94	78.324	ENSSPUG00000013424	PRDM12	95	78.324	Sphenodon_punctatus
ENSPREG00000003211	-	96	70.652	ENSSPAG00000022420	-	97	70.492	Stegastes_partitus
ENSPREG00000003211	-	94	73.098	ENSSPAG00000018824	prdm12b	95	73.370	Stegastes_partitus
ENSPREG00000003211	-	90	77.982	ENSSSCG00000005703	PRDM12	96	73.481	Sus_scrofa
ENSPREG00000003211	-	94	75.978	ENSTRUG00000018659	prdm12b	95	75.978	Takifugu_rubripes
ENSPREG00000003211	-	96	79.155	ENSTRUG00000013239	-	97	79.155	Takifugu_rubripes
ENSPREG00000003211	-	90	77.193	ENSTNIG00000009020	prdm12b	90	77.193	Tetraodon_nigroviridis
ENSPREG00000003211	-	90	84.639	ENSTNIG00000005859	-	90	84.639	Tetraodon_nigroviridis
ENSPREG00000003211	-	90	77.982	ENSUAMG00000009653	PRDM12	93	74.644	Ursus_americanus
ENSPREG00000003211	-	90	77.982	ENSVVUG00000027662	PRDM12	75	77.982	Vulpes_vulpes
ENSPREG00000003211	-	94	74.380	ENSXCOG00000002836	prdm12b	95	74.931	Xiphophorus_couchianus
ENSPREG00000003211	-	94	87.395	ENSXMAG00000028012	-	95	87.395	Xiphophorus_maculatus
ENSPREG00000003211	-	94	74.044	ENSXMAG00000005537	prdm12b	95	74.590	Xiphophorus_maculatus