EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000003222 (Gene tree)
Gene ID
103481492
Gene Symbol
-
Alias
-
Full Name
myosin light chain kinase%2C smooth muscle-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
13821 bases
Position
chrLG19:11254151-11267971
Accession
103481492
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000004588RIO1PF01163.224.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000004652-5708XM_008436969ENSPREP00000004588857 (aa)XP_008435191UPI0004A3CDA0
Gene Model
Click here to download ENSPREG00000003222's gene model file
Pathways
Pathway IDPathway NameSource
pret04020Calcium signaling pathwayKEGG
pret04270Vascular smooth muscle contractionKEGG
pret04371Apelin signaling pathwayKEGG
pret04510Focal adhesionKEGG
pret04810Regulation of actin cytoskeletonKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003222's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000003222-8751.250ENSPREG00000009707mylk59951.250
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000003222-9950.226ENSAPOG00000023231mylk59950.226Acanthochromis_polyacanthus
ENSPREG00000003222-9970.690ENSAPOG00000019520-9970.953Acanthochromis_polyacanthus
ENSPREG00000003222-10066.511ENSACIG00000024477-9966.511Amphilophus_citrinellus
ENSPREG00000003222-9950.282ENSAOCG00000014130mylk59950.282Amphiprion_ocellaris
ENSPREG00000003222-9971.412ENSAOCG00000024465-9971.412Amphiprion_ocellaris
ENSPREG00000003222-9950.169ENSAPEG00000017851mylk59752.441Amphiprion_percula
ENSPREG00000003222-9966.246ENSAPEG00000014652-9967.623Amphiprion_percula
ENSPREG00000003222-9950.462ENSATEG00000002426mylk59950.462Anabas_testudineus
ENSPREG00000003222-9949.827ENSACLG00000003301mylk59951.087Astatotilapia_calliptera
ENSPREG00000003222-9966.667ENSACLG00000007583-9966.667Astatotilapia_calliptera
ENSPREG00000003222-7858.529ENSAMXG00000019493-9159.668Astyanax_mexicanus
ENSPREG00000003222-7655.470ENSCSEG00000017281mylk58955.470Cynoglossus_semilaevis
ENSPREG00000003222-9950.406ENSCVAG00000022813mylk59950.406Cyprinodon_variegatus
ENSPREG00000003222-10080.303ENSCVAG00000022136-9980.303Cyprinodon_variegatus
ENSPREG00000003222-9949.884ENSFHEG00000011638-9949.884Fundulus_heteroclitus
ENSPREG00000003222-10082.538ENSFHEG00000010974-10082.538Fundulus_heteroclitus
ENSPREG00000003222-9950.402ENSGAFG00000000269mylk59950.402Gambusia_affinis
ENSPREG00000003222-7653.823ENSGACG00000008527mylk59953.823Gasterosteus_aculeatus
ENSPREG00000003222-9964.294ENSHBUG00000016459-9964.294Haplochromis_burtoni
ENSPREG00000003222-9949.827ENSHBUG00000002257mylk59949.827Haplochromis_burtoni
ENSPREG00000003222-7666.615ENSHCOG00000015710-8566.615Hippocampus_comes
ENSPREG00000003222-9949.249ENSIPUG00000012659mylk59949.249Ictalurus_punctatus
ENSPREG00000003222-10070.998ENSKMAG00000016742-10070.998Kryptolebias_marmoratus
ENSPREG00000003222-9949.541ENSKMAG00000019605mylk59949.541Kryptolebias_marmoratus
ENSPREG00000003222-9964.311ENSLBEG00000004115-9964.311Labrus_bergylta
ENSPREG00000003222-9951.282ENSLBEG00000003526mylk59951.282Labrus_bergylta
ENSPREG00000003222-9950.171ENSMAMG00000000610mylk59950.171Mastacembelus_armatus
ENSPREG00000003222-9949.827ENSMZEG00005022663mylk59949.827Maylandia_zebra
ENSPREG00000003222-9948.667ENSMMOG00000020584mylk59948.667Mola_mola
ENSPREG00000003222-9951.438ENSMALG00000004945mylk59951.438Monopterus_albus
ENSPREG00000003222-10067.940ENSMALG00000022416-9567.940Monopterus_albus
ENSPREG00000003222-10066.705ENSONIG00000016230-10066.705Oreochromis_niloticus
ENSPREG00000003222-5261.693ENSONIG00000019875-9761.693Oreochromis_niloticus
ENSPREG00000003222-9351.087ENSONIG00000001203mylk59761.693Oreochromis_niloticus
ENSPREG00000003222-9948.851ENSPFOG00000013597mylk59948.851Poecilia_formosa
ENSPREG00000003222-9949.006ENSPLAG00000023779mylk59949.006Poecilia_latipinna
ENSPREG00000003222-9950.175ENSPMEG00000023897mylk59950.175Poecilia_mexicana
ENSPREG00000003222-9948.295ENSPNYG00000010046mylk59948.295Pundamilia_nyererei
ENSPREG00000003222-9964.327ENSPNYG00000019509-8182.746Pundamilia_nyererei
ENSPREG00000003222-7559.538ENSSFOG00015004885-9159.538Scleropages_formosus
ENSPREG00000003222-10068.256ENSSMAG00000020328-10068.256Scophthalmus_maximus
ENSPREG00000003222-9950.000ENSSMAG00000006784mylk59950.000Scophthalmus_maximus
ENSPREG00000003222-9968.129ENSSDUG00000020847-9968.129Seriola_dumerili
ENSPREG00000003222-9967.667ENSSLDG00000019897-9967.667Seriola_lalandi_dorsalis
ENSPREG00000003222-9950.816ENSSPAG00000020815mylk59950.816Stegastes_partitus
ENSPREG00000003222-9271.696ENSSPAG00000019068-9971.696Stegastes_partitus
ENSPREG00000003222-9947.624ENSTRUG00000015150mylk59947.900Takifugu_rubripes
ENSPREG00000003222-6853.156ENSTNIG00000011699mylk59953.156Tetraodon_nigroviridis
ENSPREG00000003222-9482.776ENSXCOG00000005927-9882.776Xiphophorus_couchianus
ENSPREG00000003222-9949.540ENSXMAG00000007789mylk59949.540Xiphophorus_maculatus
ENSPREG00000003222-8792.049ENSXMAG00000015589-9492.049Xiphophorus_maculatus

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