EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003258 (Gene tree)
Gene ID: 103476418
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 48273 bases
Position: chrLG15:4050473-4098745
Accession: 103476418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004800	S1	PF00575.23	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000004864	-	2952	XM_008428735	ENSPREP00000004800	983 (aa)	XP_008426957	-
ENSPRET00000004877	-	2493	XM_017309194	ENSPREP00000004813	830 (aa)	XP_017164683	-

Gene Model

Click here to download ENSPREG00000003258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003258	si:ch211-117n7.8	87	56.286	ENSG00000068784	SRBD1	85	56.286	Homo_sapiens
ENSPREG00000003258	si:ch211-117n7.8	100	76.233	ENSAPOG00000005103	si:ch211-117n7.8	100	76.233	Acanthochromis_polyacanthus
ENSPREG00000003258	si:ch211-117n7.8	94	53.112	ENSAMEG00000005993	SRBD1	97	51.800	Ailuropoda_melanoleuca
ENSPREG00000003258	si:ch211-117n7.8	97	77.071	ENSACIG00000009875	si:ch211-117n7.8	100	77.117	Amphilophus_citrinellus
ENSPREG00000003258	si:ch211-117n7.8	100	75.886	ENSAOCG00000024718	si:ch211-117n7.8	100	75.886	Amphiprion_ocellaris
ENSPREG00000003258	si:ch211-117n7.8	97	77.143	ENSAPEG00000002645	si:ch211-117n7.8	99	77.143	Amphiprion_percula
ENSPREG00000003258	si:ch211-117n7.8	100	76.096	ENSATEG00000010844	si:ch211-117n7.8	100	76.096	Anabas_testudineus
ENSPREG00000003258	si:ch211-117n7.8	86	58.968	ENSAPLG00000006313	SRBD1	99	53.005	Anas_platyrhynchos
ENSPREG00000003258	si:ch211-117n7.8	85	56.958	ENSANAG00000025573	SRBD1	97	51.506	Aotus_nancymaae
ENSPREG00000003258	si:ch211-117n7.8	100	77.637	ENSACLG00000024219	si:ch211-117n7.8	100	77.637	Astatotilapia_calliptera
ENSPREG00000003258	si:ch211-117n7.8	100	62.977	ENSAMXG00000004294	SRBD1	100	64.427	Astyanax_mexicanus
ENSPREG00000003258	si:ch211-117n7.8	85	57.244	ENSBTAG00000007508	SRBD1	99	49.457	Bos_taurus
ENSPREG00000003258	si:ch211-117n7.8	85	56.958	ENSCJAG00000000727	SRBD1	84	56.958	Callithrix_jacchus
ENSPREG00000003258	si:ch211-117n7.8	86	57.043	ENSCAFG00000002554	SRBD1	85	57.043	Canis_familiaris
ENSPREG00000003258	si:ch211-117n7.8	86	57.565	ENSCAFG00020026284	SRBD1	98	57.565	Canis_lupus_dingo
ENSPREG00000003258	si:ch211-117n7.8	85	57.479	ENSCHIG00000016535	SRBD1	82	57.479	Capra_hircus
ENSPREG00000003258	si:ch211-117n7.8	91	54.945	ENSTSYG00000012797	SRBD1	88	54.945	Carlito_syrichta
ENSPREG00000003258	si:ch211-117n7.8	93	53.319	ENSCPOG00000004773	SRBD1	96	53.319	Cavia_porcellus
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSCCAG00000025589	SRBD1	97	51.454	Cebus_capucinus
ENSPREG00000003258	si:ch211-117n7.8	85	57.311	ENSCATG00000039530	SRBD1	84	57.311	Cercocebus_atys
ENSPREG00000003258	si:ch211-117n7.8	98	52.419	ENSCLAG00000008623	SRBD1	98	52.419	Chinchilla_lanigera
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSCSAG00000013350	SRBD1	97	51.908	Chlorocebus_sabaeus
ENSPREG00000003258	si:ch211-117n7.8	72	79.070	ENSCHOG00000003805	SRBD1	83	79.070	Choloepus_hoffmanni
ENSPREG00000003258	si:ch211-117n7.8	94	53.935	ENSCPBG00000005677	SRBD1	97	53.150	Chrysemys_picta_bellii
ENSPREG00000003258	si:ch211-117n7.8	80	40.150	ENSCING00000005950	-	99	40.150	Ciona_intestinalis
ENSPREG00000003258	si:ch211-117n7.8	80	41.688	ENSCSAVG00000000861	-	99	41.688	Ciona_savignyi
ENSPREG00000003258	si:ch211-117n7.8	87	56.171	ENSCANG00000016307	SRBD1	85	56.171	Colobus_angolensis_palliatus
ENSPREG00000003258	si:ch211-117n7.8	98	51.935	ENSCGRG00001000513	Srbd1	97	51.935	Cricetulus_griseus_chok1gshd
ENSPREG00000003258	si:ch211-117n7.8	98	51.935	ENSCGRG00000002283	Srbd1	97	51.935	Cricetulus_griseus_crigri
ENSPREG00000003258	si:ch211-117n7.8	100	71.769	ENSCSEG00000000856	si:ch211-117n7.8	100	71.769	Cynoglossus_semilaevis
ENSPREG00000003258	si:ch211-117n7.8	97	82.065	ENSCVAG00000020212	si:ch211-117n7.8	98	82.065	Cyprinodon_variegatus
ENSPREG00000003258	si:ch211-117n7.8	85	56.455	ENSDNOG00000018686	SRBD1	83	56.455	Dasypus_novemcinctus
ENSPREG00000003258	si:ch211-117n7.8	94	53.583	ENSDORG00000010468	Srbd1	96	53.583	Dipodomys_ordii
ENSPREG00000003258	si:ch211-117n7.8	80	35.901	FBgn0051156	CG31156	79	35.901	Drosophila_melanogaster
ENSPREG00000003258	si:ch211-117n7.8	75	57.741	ENSETEG00000000739	SRBD1	77	57.246	Echinops_telfairi
ENSPREG00000003258	si:ch211-117n7.8	74	48.352	ENSEBUG00000008902	si:ch211-117n7.8	95	48.352	Eptatretus_burgeri
ENSPREG00000003258	si:ch211-117n7.8	85	55.124	ENSEASG00005003132	SRBD1	98	55.597	Equus_asinus_asinus
ENSPREG00000003258	si:ch211-117n7.8	85	57.362	ENSECAG00000013865	SRBD1	82	57.362	Equus_caballus
ENSPREG00000003258	si:ch211-117n7.8	98	64.563	ENSELUG00000012592	si:ch211-117n7.8	98	65.272	Esox_lucius
ENSPREG00000003258	si:ch211-117n7.8	91	54.956	ENSFCAG00000005101	SRBD1	88	54.956	Felis_catus
ENSPREG00000003258	si:ch211-117n7.8	85	57.720	ENSFALG00000012966	SRBD1	98	52.497	Ficedula_albicollis
ENSPREG00000003258	si:ch211-117n7.8	86	57.683	ENSFDAG00000016670	SRBD1	86	57.683	Fukomys_damarensis
ENSPREG00000003258	si:ch211-117n7.8	100	81.845	ENSFHEG00000019480	si:ch211-117n7.8	100	81.845	Fundulus_heteroclitus
ENSPREG00000003258	si:ch211-117n7.8	51	70.561	ENSGMOG00000018010	-	100	70.561	Gadus_morhua
ENSPREG00000003258	si:ch211-117n7.8	85	59.763	ENSGALG00000009990	SRBD1	97	54.703	Gallus_gallus
ENSPREG00000003258	si:ch211-117n7.8	100	90.765	ENSGAFG00000019664	si:ch211-117n7.8	100	90.864	Gambusia_affinis
ENSPREG00000003258	si:ch211-117n7.8	64	80.841	ENSGACG00000010794	si:ch211-117n7.8	100	80.841	Gasterosteus_aculeatus
ENSPREG00000003258	si:ch211-117n7.8	85	58.844	ENSGAGG00000006166	SRBD1	99	58.844	Gopherus_agassizii
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSGGOG00000005910	SRBD1	88	56.401	Gorilla_gorilla
ENSPREG00000003258	si:ch211-117n7.8	97	66.701	ENSHBUG00000013207	si:ch211-117n7.8	99	66.906	Haplochromis_burtoni
ENSPREG00000003258	si:ch211-117n7.8	85	57.720	ENSHGLG00000018153	-	84	57.720	Heterocephalus_glaber_female
ENSPREG00000003258	si:ch211-117n7.8	85	57.720	ENSHGLG00100015183	-	84	57.720	Heterocephalus_glaber_male
ENSPREG00000003258	si:ch211-117n7.8	100	64.271	ENSIPUG00000009661	srbd1	100	64.806	Ictalurus_punctatus
ENSPREG00000003258	si:ch211-117n7.8	98	52.503	ENSSTOG00000005898	SRBD1	97	52.503	Ictidomys_tridecemlineatus
ENSPREG00000003258	si:ch211-117n7.8	98	50.349	ENSJJAG00000022244	Srbd1	98	50.349	Jaculus_jaculus
ENSPREG00000003258	si:ch211-117n7.8	99	79.109	ENSKMAG00000003473	si:ch211-117n7.8	100	79.109	Kryptolebias_marmoratus
ENSPREG00000003258	si:ch211-117n7.8	100	75.564	ENSLBEG00000027518	si:ch211-117n7.8	100	75.564	Labrus_bergylta
ENSPREG00000003258	si:ch211-117n7.8	86	58.197	ENSLACG00000009790	SRBD1	99	58.197	Latimeria_chalumnae
ENSPREG00000003258	si:ch211-117n7.8	93	64.187	ENSLOCG00000016360	si:ch211-117n7.8	97	62.424	Lepisosteus_oculatus
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSMFAG00000042026	SRBD1	85	56.401	Macaca_fascicularis
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSMMUG00000003490	SRBD1	85	56.401	Macaca_mulatta
ENSPREG00000003258	si:ch211-117n7.8	86	55.168	ENSMNEG00000034701	SRBD1	85	54.902	Macaca_nemestrina
ENSPREG00000003258	si:ch211-117n7.8	87	56.517	ENSMLEG00000000745	SRBD1	85	56.517	Mandrillus_leucophaeus
ENSPREG00000003258	si:ch211-117n7.8	100	74.280	ENSMAMG00000021921	si:ch211-117n7.8	100	76.068	Mastacembelus_armatus
ENSPREG00000003258	si:ch211-117n7.8	100	77.441	ENSMZEG00005027369	si:ch211-117n7.8	100	77.637	Maylandia_zebra
ENSPREG00000003258	si:ch211-117n7.8	81	56.143	ENSMGAG00000010273	SRBD1	100	56.143	Meleagris_gallopavo
ENSPREG00000003258	si:ch211-117n7.8	79	56.304	ENSMAUG00000013916	Srbd1	95	56.304	Mesocricetus_auratus
ENSPREG00000003258	si:ch211-117n7.8	85	57.429	ENSMICG00000007835	SRBD1	99	51.137	Microcebus_murinus
ENSPREG00000003258	si:ch211-117n7.8	98	51.689	ENSMOCG00000018716	Srbd1	97	51.689	Microtus_ochrogaster
ENSPREG00000003258	si:ch211-117n7.8	97	74.280	ENSMMOG00000007507	si:ch211-117n7.8	100	74.280	Mola_mola
ENSPREG00000003258	si:ch211-117n7.8	100	75.074	ENSMALG00000001562	si:ch211-117n7.8	100	75.172	Monopterus_albus
ENSPREG00000003258	si:ch211-117n7.8	86	57.109	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.224	Mus_caroli
ENSPREG00000003258	si:ch211-117n7.8	86	56.792	ENSMUSG00000024135	Srbd1	99	55.319	Mus_musculus
ENSPREG00000003258	si:ch211-117n7.8	86	56.368	MGP_PahariEiJ_G0020924	Srbd1	85	56.368	Mus_pahari
ENSPREG00000003258	si:ch211-117n7.8	86	56.557	MGP_SPRETEiJ_G0022850	Srbd1	85	56.557	Mus_spretus
ENSPREG00000003258	si:ch211-117n7.8	91	55.066	ENSMLUG00000007039	SRBD1	88	55.396	Myotis_lucifugus
ENSPREG00000003258	si:ch211-117n7.8	85	55.619	ENSNGAG00000011893	Srbd1	84	55.619	Nannospalax_galili
ENSPREG00000003258	si:ch211-117n7.8	97	75.918	ENSNBRG00000012873	si:ch211-117n7.8	99	76.122	Neolamprologus_brichardi
ENSPREG00000003258	si:ch211-117n7.8	87	55.940	ENSNLEG00000016877	SRBD1	85	55.940	Nomascus_leucogenys
ENSPREG00000003258	si:ch211-117n7.8	87	56.624	ENSODEG00000012095	SRBD1	86	56.624	Octodon_degus
ENSPREG00000003258	si:ch211-117n7.8	100	77.713	ENSONIG00000000945	si:ch211-117n7.8	100	84.606	Oreochromis_niloticus
ENSPREG00000003258	si:ch211-117n7.8	93	53.271	ENSOCUG00000015385	SRBD1	95	53.479	Oryctolagus_cuniculus
ENSPREG00000003258	si:ch211-117n7.8	100	71.220	ENSORLG00000004427	si:ch211-117n7.8	100	71.220	Oryzias_latipes
ENSPREG00000003258	si:ch211-117n7.8	100	74.074	ENSORLG00020012792	si:ch211-117n7.8	100	74.269	Oryzias_latipes_hni
ENSPREG00000003258	si:ch211-117n7.8	100	73.951	ENSORLG00015018598	si:ch211-117n7.8	100	73.951	Oryzias_latipes_hsok
ENSPREG00000003258	si:ch211-117n7.8	99	73.720	ENSOMEG00000012229	si:ch211-117n7.8	99	76.493	Oryzias_melastigma
ENSPREG00000003258	si:ch211-117n7.8	85	55.359	ENSOGAG00000001076	SRBD1	84	55.359	Otolemur_garnettii
ENSPREG00000003258	si:ch211-117n7.8	85	53.507	ENSOARG00000005958	SRBD1	84	53.507	Ovis_aries
ENSPREG00000003258	si:ch211-117n7.8	86	56.792	ENSPPAG00000038442	SRBD1	97	51.457	Pan_paniscus
ENSPREG00000003258	si:ch211-117n7.8	91	54.906	ENSPPRG00000003449	SRBD1	88	54.906	Panthera_pardus
ENSPREG00000003258	si:ch211-117n7.8	92	54.446	ENSPTIG00000012495	SRBD1	89	54.446	Panthera_tigris_altaica
ENSPREG00000003258	si:ch211-117n7.8	86	56.792	ENSPTRG00000011889	SRBD1	97	51.457	Pan_troglodytes
ENSPREG00000003258	si:ch211-117n7.8	87	56.401	ENSPANG00000008063	SRBD1	85	56.401	Papio_anubis
ENSPREG00000003258	si:ch211-117n7.8	94	63.617	ENSPKIG00000021973	si:ch211-117n7.8	99	61.454	Paramormyrops_kingsleyae
ENSPREG00000003258	si:ch211-117n7.8	85	58.323	ENSPSIG00000008992	SRBD1	84	58.323	Pelodiscus_sinensis
ENSPREG00000003258	si:ch211-117n7.8	89	77.221	ENSPMGG00000013348	si:ch211-117n7.8	99	72.998	Periophthalmus_magnuspinnatus
ENSPREG00000003258	si:ch211-117n7.8	85	55.466	ENSPEMG00000020684	Srbd1	84	55.466	Peromyscus_maniculatus_bairdii
ENSPREG00000003258	si:ch211-117n7.8	100	92.850	ENSPFOG00000010650	si:ch211-117n7.8	100	92.850	Poecilia_formosa
ENSPREG00000003258	si:ch211-117n7.8	100	92.949	ENSPLAG00000002141	si:ch211-117n7.8	100	92.949	Poecilia_latipinna
ENSPREG00000003258	si:ch211-117n7.8	100	93.049	ENSPMEG00000018537	si:ch211-117n7.8	100	93.049	Poecilia_mexicana
ENSPREG00000003258	si:ch211-117n7.8	87	52.751	ENSPPYG00000012444	SRBD1	85	52.643	Pongo_abelii
ENSPREG00000003258	si:ch211-117n7.8	77	51.969	ENSPCAG00000005629	SRBD1	80	51.969	Procavia_capensis
ENSPREG00000003258	si:ch211-117n7.8	91	45.993	ENSPCOG00000017669	SRBD1	99	43.294	Propithecus_coquereli
ENSPREG00000003258	si:ch211-117n7.8	85	50.766	ENSPVAG00000001782	SRBD1	97	46.240	Pteropus_vampyrus
ENSPREG00000003258	si:ch211-117n7.8	97	74.051	ENSPNYG00000000508	si:ch211-117n7.8	100	74.256	Pundamilia_nyererei
ENSPREG00000003258	si:ch211-117n7.8	96	66.771	ENSPNAG00000013492	SRBD1	99	65.358	Pygocentrus_nattereri
ENSPREG00000003258	si:ch211-117n7.8	85	56.287	ENSRNOG00000014720	Srbd1	83	56.243	Rattus_norvegicus
ENSPREG00000003258	si:ch211-117n7.8	85	56.958	ENSRBIG00000033486	SRBD1	84	56.958	Rhinopithecus_bieti
ENSPREG00000003258	si:ch211-117n7.8	85	56.958	ENSRROG00000041599	SRBD1	84	56.958	Rhinopithecus_roxellana
ENSPREG00000003258	si:ch211-117n7.8	85	57.075	ENSSBOG00000024982	SRBD1	84	57.075	Saimiri_boliviensis_boliviensis
ENSPREG00000003258	si:ch211-117n7.8	97	62.225	ENSSFOG00015001128	si:ch211-117n7.8	99	62.225	Scleropages_formosus
ENSPREG00000003258	si:ch211-117n7.8	100	74.561	ENSSMAG00000018256	si:ch211-117n7.8	100	74.561	Scophthalmus_maximus
ENSPREG00000003258	si:ch211-117n7.8	94	78.571	ENSSLDG00000023189	si:ch211-117n7.8	99	77.151	Seriola_lalandi_dorsalis
ENSPREG00000003258	si:ch211-117n7.8	85	53.546	ENSSARG00000009740	SRBD1	85	53.546	Sorex_araneus
ENSPREG00000003258	si:ch211-117n7.8	86	59.482	ENSSPUG00000010475	SRBD1	94	59.482	Sphenodon_punctatus
ENSPREG00000003258	si:ch211-117n7.8	97	73.848	ENSSPAG00000008092	-	99	74.274	Stegastes_partitus
ENSPREG00000003258	si:ch211-117n7.8	85	57.597	ENSSSCG00000008445	SRBD1	82	57.597	Sus_scrofa
ENSPREG00000003258	si:ch211-117n7.8	85	58.049	ENSTGUG00000003878	SRBD1	100	58.049	Taeniopygia_guttata
ENSPREG00000003258	si:ch211-117n7.8	99	71.637	ENSTRUG00000007080	si:ch211-117n7.8	94	79.697	Takifugu_rubripes
ENSPREG00000003258	si:ch211-117n7.8	97	72.864	ENSTNIG00000007464	si:ch211-117n7.8	97	72.864	Tetraodon_nigroviridis
ENSPREG00000003258	si:ch211-117n7.8	56	80.851	ENSTBEG00000004556	SRBD1	54	80.851	Tupaia_belangeri
ENSPREG00000003258	si:ch211-117n7.8	78	58.144	ENSTTRG00000011871	SRBD1	75	58.144	Tursiops_truncatus
ENSPREG00000003258	si:ch211-117n7.8	91	55.298	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSPREG00000003258	si:ch211-117n7.8	90	55.754	ENSUMAG00000012902	SRBD1	87	55.754	Ursus_maritimus
ENSPREG00000003258	si:ch211-117n7.8	85	56.722	ENSVPAG00000006825	SRBD1	92	56.722	Vicugna_pacos
ENSPREG00000003258	si:ch211-117n7.8	86	57.110	ENSVVUG00000005389	SRBD1	85	57.110	Vulpes_vulpes
ENSPREG00000003258	si:ch211-117n7.8	99	45.224	ENSXETG00000002760	srbd1	98	45.419	Xenopus_tropicalis
ENSPREG00000003258	si:ch211-117n7.8	100	90.963	ENSXMAG00000016861	si:ch211-117n7.8	100	90.963	Xiphophorus_maculatus