EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003434 (Gene tree)
Gene ID: 103472261
Gene Symbol: -
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2989 bases
Position: chrLG11:11719541-11722529
Accession: 103472261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004888	SHS2_Rpb7-N	PF03876.17	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000004955	-	1110	XM_008421761	ENSPREP00000004888	369 (aa)	XP_008419983	UPI0007EBDD07

Gene Model

Click here to download ENSPREG00000003434's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003434	-	96	56.319	ENSCSEG00000008986	-	94	56.319	Cynoglossus_semilaevis
ENSPREG00000003434	-	96	64.888	ENSMAMG00000010095	-	94	65.374	Mastacembelus_armatus
ENSPREG00000003434	-	95	62.060	ENSONIG00000010857	-	96	62.060	Oreochromis_niloticus
ENSPREG00000003434	-	100	62.240	ENSOMEG00000015768	-	99	63.969	Oryzias_melastigma
ENSPREG00000003434	-	100	92.593	ENSPFOG00000001131	-	100	92.857	Poecilia_formosa
ENSPREG00000003434	-	100	92.593	ENSPLAG00000019986	-	100	92.857	Poecilia_latipinna
ENSPREG00000003434	-	100	93.386	ENSPMEG00000022232	-	100	93.651	Poecilia_mexicana
ENSPREG00000003434	-	97	67.473	ENSSLDG00000013316	-	96	67.385	Seriola_lalandi_dorsalis
ENSPREG00000003434	-	99	56.658	ENSTRUG00000019854	-	64	70.492	Takifugu_rubripes
ENSPREG00000003434	-	97	84.932	ENSXMAG00000023876	-	97	88.219	Xiphophorus_maculatus