EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003477 (Gene tree)
Gene ID: 103464562
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6271 bases
Position: chrLG5:4436358-4442628
Accession: 103464562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000004951	dsrm	PF00035.26	2.9e-49	1	4
ENSPREP00000004951	dsrm	PF00035.26	2.9e-49	2	4
ENSPREP00000004951	dsrm	PF00035.26	2.9e-49	3	4
ENSPREP00000004951	dsrm	PF00035.26	2.9e-49	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005017	-	2091	XM_008408740	ENSPREP00000004951	696 (aa)	XP_008406962	UPI0004A43A7D

Gene Model

Click here to download ENSPREG00000003477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003477	stau1	84	48.922	ENSPREG00000017795	stau2	97	45.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003477	stau1	96	73.242	ENSG00000124214	STAU1	99	73.242	Homo_sapiens
ENSPREG00000003477	stau1	100	88.937	ENSAPOG00000017260	stau1	100	88.937	Acanthochromis_polyacanthus
ENSPREG00000003477	stau1	100	68.750	ENSAMEG00000013681	STAU1	99	68.750	Ailuropoda_melanoleuca
ENSPREG00000003477	stau1	99	86.331	ENSACIG00000015918	stau1	100	87.213	Amphilophus_citrinellus
ENSPREG00000003477	stau1	99	89.784	ENSAOCG00000012224	stau1	100	89.655	Amphiprion_ocellaris
ENSPREG00000003477	stau1	99	89.784	ENSAPEG00000012308	stau1	100	89.655	Amphiprion_percula
ENSPREG00000003477	stau1	100	89.655	ENSATEG00000024600	stau1	100	89.671	Anabas_testudineus
ENSPREG00000003477	stau1	100	70.897	ENSAPLG00000010527	STAU1	100	70.897	Anas_platyrhynchos
ENSPREG00000003477	stau1	100	71.650	ENSACAG00000015909	STAU1	99	71.650	Anolis_carolinensis
ENSPREG00000003477	stau1	96	72.201	ENSANAG00000032714	STAU1	99	72.201	Aotus_nancymaae
ENSPREG00000003477	stau1	99	88.345	ENSACLG00000012270	stau1	100	88.218	Astatotilapia_calliptera
ENSPREG00000003477	stau1	87	74.170	ENSAMXG00000016812	stau1	98	74.354	Astyanax_mexicanus
ENSPREG00000003477	stau1	96	73.047	ENSBTAG00000000241	STAU1	99	73.047	Bos_taurus
ENSPREG00000003477	stau1	96	73.047	ENSCJAG00000016233	STAU1	99	73.047	Callithrix_jacchus
ENSPREG00000003477	stau1	96	72.852	ENSCAFG00000011347	STAU1	97	72.852	Canis_familiaris
ENSPREG00000003477	stau1	96	69.591	ENSCAFG00020017123	STAU1	99	72.549	Canis_lupus_dingo
ENSPREG00000003477	stau1	96	72.656	ENSCHIG00000001799	-	99	72.656	Capra_hircus
ENSPREG00000003477	stau1	96	71.875	ENSTSYG00000036179	-	99	71.875	Carlito_syrichta
ENSPREG00000003477	stau1	72	72.112	ENSCAPG00000017041	STAU1	99	71.912	Cavia_aperea
ENSPREG00000003477	stau1	71	70.400	ENSCPOG00000005566	STAU1	99	70.400	Cavia_porcellus
ENSPREG00000003477	stau1	96	72.201	ENSCCAG00000034339	STAU1	99	72.201	Cebus_capucinus
ENSPREG00000003477	stau1	96	74.732	ENSCATG00000028474	STAU1	99	74.732	Cercocebus_atys
ENSPREG00000003477	stau1	71	73.200	ENSCLAG00000006516	-	99	73.200	Chinchilla_lanigera
ENSPREG00000003477	stau1	71	59.519	ENSCLAG00000002784	-	99	59.319	Chinchilla_lanigera
ENSPREG00000003477	stau1	72	73.307	ENSCSAG00000014986	STAU1	99	73.307	Chlorocebus_sabaeus
ENSPREG00000003477	stau1	96	73.489	ENSCHOG00000001511	STAU1	99	73.489	Choloepus_hoffmanni
ENSPREG00000003477	stau1	100	71.893	ENSCPBG00000026741	STAU1	100	71.893	Chrysemys_picta_bellii
ENSPREG00000003477	stau1	96	73.438	ENSCANG00000039220	STAU1	99	73.438	Colobus_angolensis_palliatus
ENSPREG00000003477	stau1	71	69.000	ENSCGRG00001013453	Stau1	99	69.000	Cricetulus_griseus_chok1gshd
ENSPREG00000003477	stau1	71	69.000	ENSCGRG00000007216	Stau1	99	69.000	Cricetulus_griseus_crigri
ENSPREG00000003477	stau1	99	76.056	ENSCSEG00000000792	stau1	99	77.183	Cynoglossus_semilaevis
ENSPREG00000003477	stau1	93	86.328	ENSCVAG00000005906	stau1	100	87.109	Cyprinodon_variegatus
ENSPREG00000003477	stau1	100	77.650	ENSDARG00000044182	stau1	100	78.527	Danio_rerio
ENSPREG00000003477	stau1	96	73.489	ENSDNOG00000014933	STAU1	97	73.294	Dasypus_novemcinctus
ENSPREG00000003477	stau1	71	71.862	ENSDORG00000030220	Stau1	99	71.862	Dipodomys_ordii
ENSPREG00000003477	stau1	63	75.828	ENSETEG00000018235	STAU1	88	75.828	Echinops_telfairi
ENSPREG00000003477	stau1	96	72.587	ENSEASG00005023343	STAU1	99	72.587	Equus_asinus_asinus
ENSPREG00000003477	stau1	96	73.438	ENSECAG00000012894	STAU1	99	73.438	Equus_caballus
ENSPREG00000003477	stau1	56	77.157	ENSEEUG00000014344	STAU1	68	77.157	Erinaceus_europaeus
ENSPREG00000003477	stau1	99	80.481	ENSELUG00000002529	stau1	99	81.677	Esox_lucius
ENSPREG00000003477	stau1	96	73.438	ENSFCAG00000001447	STAU1	99	73.438	Felis_catus
ENSPREG00000003477	stau1	100	72.404	ENSFALG00000012940	STAU1	100	72.404	Ficedula_albicollis
ENSPREG00000003477	stau1	72	55.179	ENSFDAG00000020837	-	99	54.582	Fukomys_damarensis
ENSPREG00000003477	stau1	71	72.800	ENSFDAG00000014119	-	99	72.800	Fukomys_damarensis
ENSPREG00000003477	stau1	100	93.678	ENSFHEG00000013517	stau1	100	93.678	Fundulus_heteroclitus
ENSPREG00000003477	stau1	100	70.531	ENSGMOG00000016850	stau1	100	70.531	Gadus_morhua
ENSPREG00000003477	stau1	100	73.115	ENSGALG00000004736	STAU1	100	73.115	Gallus_gallus
ENSPREG00000003477	stau1	100	97.989	ENSGAFG00000010437	stau1	100	97.989	Gambusia_affinis
ENSPREG00000003477	stau1	99	87.194	ENSGACG00000001352	stau1	100	87.069	Gasterosteus_aculeatus
ENSPREG00000003477	stau1	100	72.507	ENSGAGG00000009825	STAU1	100	72.507	Gopherus_agassizii
ENSPREG00000003477	stau1	96	67.692	ENSGGOG00000025351	STAU1	96	76.791	Gorilla_gorilla
ENSPREG00000003477	stau1	99	88.201	ENSHBUG00000023668	stau1	100	88.075	Haplochromis_burtoni
ENSPREG00000003477	stau1	71	73.684	ENSHGLG00000008730	STAU1	99	73.684	Heterocephalus_glaber_female
ENSPREG00000003477	stau1	71	73.684	ENSHGLG00100000098	STAU1	99	73.684	Heterocephalus_glaber_male
ENSPREG00000003477	stau1	99	82.066	ENSHCOG00000018461	stau1	100	82.092	Hippocampus_comes
ENSPREG00000003477	stau1	99	73.882	ENSIPUG00000023725	stau1	99	73.882	Ictalurus_punctatus
ENSPREG00000003477	stau1	71	73.077	ENSSTOG00000003634	STAU1	99	73.077	Ictidomys_tridecemlineatus
ENSPREG00000003477	stau1	71	72.267	ENSJJAG00000020032	Stau1	99	72.267	Jaculus_jaculus
ENSPREG00000003477	stau1	99	84.814	ENSKMAG00000007135	stau1	99	85.817	Kryptolebias_marmoratus
ENSPREG00000003477	stau1	100	87.069	ENSLBEG00000020172	stau1	100	87.069	Labrus_bergylta
ENSPREG00000003477	stau1	98	72.532	ENSLACG00000016157	STAU1	97	72.532	Latimeria_chalumnae
ENSPREG00000003477	stau1	100	74.892	ENSLOCG00000003134	stau1	100	75.897	Lepisosteus_oculatus
ENSPREG00000003477	stau1	73	73.633	ENSLAFG00000003238	STAU1	99	73.633	Loxodonta_africana
ENSPREG00000003477	stau1	96	74.732	ENSMFAG00000040931	STAU1	99	76.296	Macaca_fascicularis
ENSPREG00000003477	stau1	96	67.692	ENSMMUG00000002302	STAU1	99	76.296	Macaca_mulatta
ENSPREG00000003477	stau1	96	73.784	ENSMNEG00000033821	STAU1	99	73.784	Macaca_nemestrina
ENSPREG00000003477	stau1	96	73.242	ENSMLEG00000031383	STAU1	99	73.242	Mandrillus_leucophaeus
ENSPREG00000003477	stau1	100	89.080	ENSMAMG00000017586	stau1	100	89.371	Mastacembelus_armatus
ENSPREG00000003477	stau1	99	88.345	ENSMZEG00005015605	stau1	100	88.218	Maylandia_zebra
ENSPREG00000003477	stau1	100	71.034	ENSMGAG00000004719	STAU1	100	71.034	Meleagris_gallopavo
ENSPREG00000003477	stau1	71	69.000	ENSMAUG00000013846	Stau1	99	69.000	Mesocricetus_auratus
ENSPREG00000003477	stau1	96	72.008	ENSMICG00000001995	STAU1	99	72.008	Microcebus_murinus
ENSPREG00000003477	stau1	71	69.600	ENSMOCG00000018743	Stau1	99	69.600	Microtus_ochrogaster
ENSPREG00000003477	stau1	100	85.079	ENSMMOG00000015455	stau1	100	85.079	Mola_mola
ENSPREG00000003477	stau1	96	72.230	ENSMODG00000016276	STAU1	99	72.230	Monodelphis_domestica
ENSPREG00000003477	stau1	99	88.921	ENSMALG00000000045	stau1	99	88.921	Monopterus_albus
ENSPREG00000003477	stau1	71	70.040	MGP_CAROLIEiJ_G0024699	Stau1	99	70.204	Mus_caroli
ENSPREG00000003477	stau1	71	69.838	ENSMUSG00000039536	Stau1	99	70.000	Mus_musculus
ENSPREG00000003477	stau1	71	69.433	MGP_PahariEiJ_G0026141	Stau1	99	69.433	Mus_pahari
ENSPREG00000003477	stau1	71	69.838	MGP_SPRETEiJ_G0025619	Stau1	99	70.000	Mus_spretus
ENSPREG00000003477	stau1	96	70.030	ENSMPUG00000017581	STAU1	99	70.030	Mustela_putorius_furo
ENSPREG00000003477	stau1	96	72.039	ENSMLUG00000008407	STAU1	97	72.039	Myotis_lucifugus
ENSPREG00000003477	stau1	71	71.600	ENSNGAG00000007108	Stau1	99	71.600	Nannospalax_galili
ENSPREG00000003477	stau1	99	88.058	ENSNBRG00000017596	stau1	100	87.931	Neolamprologus_brichardi
ENSPREG00000003477	stau1	96	73.242	ENSNLEG00000006955	STAU1	99	73.242	Nomascus_leucogenys
ENSPREG00000003477	stau1	66	76.674	ENSMEUG00000003263	STAU1	80	76.674	Notamacropus_eugenii
ENSPREG00000003477	stau1	91	70.898	ENSOPRG00000014569	STAU1	89	70.898	Ochotona_princeps
ENSPREG00000003477	stau1	72	73.506	ENSODEG00000006523	STAU1	99	73.506	Octodon_degus
ENSPREG00000003477	stau1	100	85.475	ENSONIG00000004152	stau1	99	85.475	Oreochromis_niloticus
ENSPREG00000003477	stau1	100	70.663	ENSOANG00000006394	STAU1	100	70.663	Ornithorhynchus_anatinus
ENSPREG00000003477	stau1	96	72.656	ENSOCUG00000006214	STAU1	99	72.656	Oryctolagus_cuniculus
ENSPREG00000003477	stau1	100	85.509	ENSOMEG00000002388	stau1	100	85.509	Oryzias_melastigma
ENSPREG00000003477	stau1	71	49.801	ENSOGAG00000028222	-	99	49.102	Otolemur_garnettii
ENSPREG00000003477	stau1	96	73.047	ENSOGAG00000002127	STAU1	97	73.047	Otolemur_garnettii
ENSPREG00000003477	stau1	96	72.656	ENSOARG00000012204	STAU1	97	72.656	Ovis_aries
ENSPREG00000003477	stau1	96	67.692	ENSPPAG00000032023	STAU1	96	76.791	Pan_paniscus
ENSPREG00000003477	stau1	96	73.438	ENSPPRG00000003436	STAU1	99	73.438	Panthera_pardus
ENSPREG00000003477	stau1	96	73.438	ENSPTIG00000011768	STAU1	99	73.438	Panthera_tigris_altaica
ENSPREG00000003477	stau1	96	67.692	ENSPTRG00000023130	STAU1	96	76.791	Pan_troglodytes
ENSPREG00000003477	stau1	96	74.732	ENSPANG00000020560	STAU1	99	74.732	Papio_anubis
ENSPREG00000003477	stau1	99	76.521	ENSPKIG00000024588	stau1	99	77.511	Paramormyrops_kingsleyae
ENSPREG00000003477	stau1	100	72.650	ENSPSIG00000010731	STAU1	99	72.650	Pelodiscus_sinensis
ENSPREG00000003477	stau1	100	83.691	ENSPMGG00000018553	stau1	100	83.548	Periophthalmus_magnuspinnatus
ENSPREG00000003477	stau1	71	69.400	ENSPEMG00000022045	Stau1	99	69.400	Peromyscus_maniculatus_bairdii
ENSPREG00000003477	stau1	99	70.071	ENSPCIG00000023269	STAU1	99	71.833	Phascolarctos_cinereus
ENSPREG00000003477	stau1	100	98.132	ENSPFOG00000017253	stau1	100	98.132	Poecilia_formosa
ENSPREG00000003477	stau1	58	94.527	ENSPLAG00000014829	stau1	97	95.128	Poecilia_latipinna
ENSPREG00000003477	stau1	100	94.253	ENSPMEG00000007495	stau1	100	94.253	Poecilia_mexicana
ENSPREG00000003477	stau1	96	72.852	ENSPPYG00000011111	STAU1	99	72.852	Pongo_abelii
ENSPREG00000003477	stau1	69	66.458	ENSPCAG00000002459	STAU1	100	66.458	Procavia_capensis
ENSPREG00000003477	stau1	96	72.656	ENSPCOG00000027746	STAU1	99	72.656	Propithecus_coquereli
ENSPREG00000003477	stau1	63	77.152	ENSPVAG00000015019	STAU1	86	77.152	Pteropus_vampyrus
ENSPREG00000003477	stau1	99	88.201	ENSPNYG00000014436	stau1	100	88.075	Pundamilia_nyererei
ENSPREG00000003477	stau1	99	76.571	ENSPNAG00000011323	stau1	99	76.571	Pygocentrus_nattereri
ENSPREG00000003477	stau1	71	69.000	ENSRNOG00000007781	Stau1	99	69.000	Rattus_norvegicus
ENSPREG00000003477	stau1	72	72.763	ENSRBIG00000037345	STAU1	100	72.565	Rhinopithecus_bieti
ENSPREG00000003477	stau1	96	73.784	ENSRROG00000039008	STAU1	99	73.784	Rhinopithecus_roxellana
ENSPREG00000003477	stau1	96	72.201	ENSSBOG00000034448	STAU1	99	72.201	Saimiri_boliviensis_boliviensis
ENSPREG00000003477	stau1	96	73.786	ENSSHAG00000009492	STAU1	99	72.083	Sarcophilus_harrisii
ENSPREG00000003477	stau1	99	79.053	ENSSFOG00015021497	stau1	99	79.053	Scleropages_formosus
ENSPREG00000003477	stau1	100	89.368	ENSSMAG00000017410	stau1	100	89.368	Scophthalmus_maximus
ENSPREG00000003477	stau1	99	89.928	ENSSDUG00000019439	stau1	100	89.799	Seriola_dumerili
ENSPREG00000003477	stau1	100	89.799	ENSSLDG00000025040	stau1	100	89.799	Seriola_lalandi_dorsalis
ENSPREG00000003477	stau1	100	71.610	ENSSPUG00000017983	STAU1	99	71.723	Sphenodon_punctatus
ENSPREG00000003477	stau1	100	89.655	ENSSPAG00000019275	stau1	100	89.655	Stegastes_partitus
ENSPREG00000003477	stau1	96	73.633	ENSSSCG00000027444	STAU1	99	73.927	Sus_scrofa
ENSPREG00000003477	stau1	100	69.876	ENSTGUG00000008784	STAU1	100	69.876	Taeniopygia_guttata
ENSPREG00000003477	stau1	100	84.914	ENSTRUG00000005837	stau1	100	85.920	Takifugu_rubripes
ENSPREG00000003477	stau1	97	85.015	ENSTNIG00000014732	stau1	99	85.015	Tetraodon_nigroviridis
ENSPREG00000003477	stau1	96	63.158	ENSTBEG00000009404	STAU1	99	63.158	Tupaia_belangeri
ENSPREG00000003477	stau1	66	73.218	ENSTTRG00000004285	STAU1	80	73.218	Tursiops_truncatus
ENSPREG00000003477	stau1	72	72.047	ENSUAMG00000025449	STAU1	99	72.047	Ursus_americanus
ENSPREG00000003477	stau1	54	69.531	ENSUMAG00000024475	STAU1	89	69.531	Ursus_maritimus
ENSPREG00000003477	stau1	96	73.633	ENSVPAG00000001313	STAU1	99	73.633	Vicugna_pacos
ENSPREG00000003477	stau1	96	69.591	ENSVVUG00000022325	STAU1	99	69.591	Vulpes_vulpes
ENSPREG00000003477	stau1	97	70.858	ENSXETG00000001783	stau1	96	71.006	Xenopus_tropicalis
ENSPREG00000003477	stau1	56	92.839	ENSXCOG00000008804	stau1	98	92.839	Xiphophorus_couchianus
ENSPREG00000003477	stau1	100	97.701	ENSXMAG00000016175	stau1	100	97.701	Xiphophorus_maculatus