EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003514 (Gene tree)
Gene ID: 103473488
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14181 bases
Position: chrLG12:9890285-9904465
Accession: 103473488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005011	AF-4	PF05110.13	5.8e-249	1	2
ENSPREP00000005011	AF-4	PF05110.13	5.8e-249	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005079	-	3291	XM_008423784	ENSPREP00000005011	1096 (aa)	XP_008422006	UPI0004A4CD65

Gene Model

Click here to download ENSPREG00000003514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003514	-	54	39.080	ENSG00000155966	AFF2	80	30.055	Homo_sapiens
ENSPREG00000003514	-	100	54.244	ENSAPOG00000002994	-	100	54.368	Acanthochromis_polyacanthus
ENSPREG00000003514	-	53	44.172	ENSAMEG00000017764	AFF4	70	36.585	Ailuropoda_melanoleuca
ENSPREG00000003514	-	79	58.082	ENSACIG00000021066	-	96	58.082	Amphilophus_citrinellus
ENSPREG00000003514	-	100	55.319	ENSAOCG00000020283	-	100	55.017	Amphiprion_ocellaris
ENSPREG00000003514	-	100	55.357	ENSAPEG00000018794	-	100	55.055	Amphiprion_percula
ENSPREG00000003514	-	100	54.966	ENSATEG00000015552	-	99	54.798	Anabas_testudineus
ENSPREG00000003514	-	55	39.665	ENSANAG00000037761	AFF4	69	35.778	Aotus_nancymaae
ENSPREG00000003514	-	99	51.034	ENSACLG00000002905	-	99	51.588	Astatotilapia_calliptera
ENSPREG00000003514	-	53	41.975	ENSBTAG00000009482	AFF4	70	37.029	Bos_taurus
ENSPREG00000003514	-	59	58.333	ENSCPOG00000034568	AFF1	53	58.333	Cavia_porcellus
ENSPREG00000003514	-	55	38.043	ENSCATG00000044510	AFF4	69	36.222	Cercocebus_atys
ENSPREG00000003514	-	55	39.665	ENSCLAG00000013850	AFF4	69	36.667	Chinchilla_lanigera
ENSPREG00000003514	-	57	50.847	ENSCLAG00000017100	AFF3	86	50.847	Chinchilla_lanigera
ENSPREG00000003514	-	73	37.857	ENSCPBG00000005382	AFF1	71	38.235	Chrysemys_picta_bellii
ENSPREG00000003514	-	55	47.458	ENSCGRG00000003408	Aff3	61	46.774	Cricetulus_griseus_crigri
ENSPREG00000003514	-	100	64.292	ENSCVAG00000015626	-	100	64.470	Cyprinodon_variegatus
ENSPREG00000003514	-	61	58.621	ENSDORG00000013881	Aff1	53	58.621	Dipodomys_ordii
ENSPREG00000003514	-	53	42.593	ENSEASG00005018361	AFF4	70	37.029	Equus_asinus_asinus
ENSPREG00000003514	-	53	41.975	ENSECAG00000011969	AFF4	70	36.807	Equus_caballus
ENSPREG00000003514	-	60	50.847	ENSECAG00000006249	AFF3	52	50.847	Equus_caballus
ENSPREG00000003514	-	99	38.875	ENSELUG00000019953	-	94	53.333	Esox_lucius
ENSPREG00000003514	-	55	39.665	ENSFDAG00000005342	AFF4	69	36.889	Fukomys_damarensis
ENSPREG00000003514	-	78	67.724	ENSFHEG00000003521	-	100	67.044	Fundulus_heteroclitus
ENSPREG00000003514	-	74	57.971	ENSGALG00000043935	AFF1	69	57.971	Gallus_gallus
ENSPREG00000003514	-	99	48.735	ENSGACG00000016333	-	99	56.300	Gasterosteus_aculeatus
ENSPREG00000003514	-	100	51.286	ENSHBUG00000005828	-	100	51.372	Haplochromis_burtoni
ENSPREG00000003514	-	57	46.018	ENSHCOG00000016280	aff4	54	47.945	Hippocampus_comes
ENSPREG00000003514	-	53	40.741	ENSSTOG00000026695	AFF4	66	42.500	Ictidomys_tridecemlineatus
ENSPREG00000003514	-	100	54.974	ENSKMAG00000013113	-	100	55.565	Kryptolebias_marmoratus
ENSPREG00000003514	-	100	50.630	ENSLBEG00000016928	-	99	50.084	Labrus_bergylta
ENSPREG00000003514	-	55	39.429	ENSLACG00000008849	AFF4	67	36.285	Latimeria_chalumnae
ENSPREG00000003514	-	69	42.355	ENSLOCG00000004025	AFF1	99	33.305	Lepisosteus_oculatus
ENSPREG00000003514	-	53	39.634	ENSLAFG00000010555	AFF4	69	36.364	Loxodonta_africana
ENSPREG00000003514	-	53	39.464	ENSLAFG00000018691	AFF2	91	30.312	Loxodonta_africana
ENSPREG00000003514	-	55	39.665	ENSMFAG00000034615	AFF4	69	36.222	Macaca_fascicularis
ENSPREG00000003514	-	55	39.665	ENSMMUG00000015640	AFF4	75	35.920	Macaca_mulatta
ENSPREG00000003514	-	55	39.665	ENSMNEG00000033381	AFF4	69	36.222	Macaca_nemestrina
ENSPREG00000003514	-	99	52.436	ENSMAMG00000016189	-	99	52.601	Mastacembelus_armatus
ENSPREG00000003514	-	99	51.121	ENSMZEG00005020442	-	99	51.674	Maylandia_zebra
ENSPREG00000003514	-	53	38.323	ENSMOCG00000003884	Aff4	68	35.230	Microtus_ochrogaster
ENSPREG00000003514	-	55	50.000	ENSMMOG00000010019	aff2	70	50.000	Mola_mola
ENSPREG00000003514	-	55	40.223	ENSMODG00000013842	AFF4	70	35.255	Monodelphis_domestica
ENSPREG00000003514	-	62	50.000	ENSMODG00000020745	AFF1	52	53.333	Monodelphis_domestica
ENSPREG00000003514	-	100	53.322	ENSMALG00000002436	-	99	52.724	Monopterus_albus
ENSPREG00000003514	-	53	39.130	MGP_CAROLIEiJ_G0016331	Aff4	69	36.807	Mus_caroli
ENSPREG00000003514	-	53	39.080	MGP_CAROLIEiJ_G0033123	Aff2	55	34.426	Mus_caroli
ENSPREG00000003514	-	53	39.080	ENSMUSG00000031189	Aff2	55	34.426	Mus_musculus
ENSPREG00000003514	-	57	50.847	ENSMUSG00000037138	Aff3	52	50.000	Mus_musculus
ENSPREG00000003514	-	57	50.847	MGP_PahariEiJ_G0027310	Aff3	53	50.847	Mus_pahari
ENSPREG00000003514	-	53	39.453	MGP_PahariEiJ_G0031666	Aff2	55	34.903	Mus_pahari
ENSPREG00000003514	-	53	39.080	MGP_SPRETEiJ_G0034278	Aff2	55	34.426	Mus_spretus
ENSPREG00000003514	-	61	62.687	ENSMPUG00000002270	AFF1	53	62.687	Mustela_putorius_furo
ENSPREG00000003514	-	53	41.358	ENSMPUG00000010316	AFF4	50	45.070	Mustela_putorius_furo
ENSPREG00000003514	-	55	36.981	ENSOPRG00000017154	-	69	35.084	Ochotona_princeps
ENSPREG00000003514	-	50	45.378	ENSODEG00000008137	AFF4	69	36.667	Octodon_degus
ENSPREG00000003514	-	60	64.516	ENSOCUG00000002105	AFF1	57	64.516	Oryctolagus_cuniculus
ENSPREG00000003514	-	53	40.741	ENSOCUG00000013635	AFF4	50	45.070	Oryctolagus_cuniculus
ENSPREG00000003514	-	70	67.073	ENSORLG00000006428	-	99	67.073	Oryzias_latipes
ENSPREG00000003514	-	84	67.073	ENSORLG00020003991	-	99	67.073	Oryzias_latipes_hni
ENSPREG00000003514	-	84	67.073	ENSORLG00015009287	-	99	67.073	Oryzias_latipes_hsok
ENSPREG00000003514	-	83	73.171	ENSOMEG00000005799	-	99	73.171	Oryzias_melastigma
ENSPREG00000003514	-	58	61.290	ENSOARG00000004522	AFF1	54	61.290	Ovis_aries
ENSPREG00000003514	-	55	39.665	ENSPANG00000007039	AFF4	69	36.222	Papio_anubis
ENSPREG00000003514	-	61	54.643	ENSPKIG00000007777	-	58	53.156	Paramormyrops_kingsleyae
ENSPREG00000003514	-	74	37.890	ENSPSIG00000003759	AFF1	71	38.571	Pelodiscus_sinensis
ENSPREG00000003514	-	53	40.741	ENSPEMG00000007995	Aff4	70	35.886	Peromyscus_maniculatus_bairdii
ENSPREG00000003514	-	100	92.793	ENSPFOG00000004581	-	100	92.252	Poecilia_formosa
ENSPREG00000003514	-	95	93.232	ENSPLAG00000012910	-	100	92.850	Poecilia_latipinna
ENSPREG00000003514	-	65	91.586	ENSPMEG00000020100	-	97	91.771	Poecilia_mexicana
ENSPREG00000003514	-	53	40.123	ENSRNOG00000006965	Aff4	69	35.667	Rattus_norvegicus
ENSPREG00000003514	-	55	39.665	ENSRROG00000033812	AFF4	69	36.364	Rhinopithecus_roxellana
ENSPREG00000003514	-	55	40.223	ENSSHAG00000013198	AFF4	70	35.955	Sarcophilus_harrisii
ENSPREG00000003514	-	53	38.224	ENSSHAG00000009556	AFF2	85	30.990	Sarcophilus_harrisii
ENSPREG00000003514	-	99	51.515	ENSSMAG00000007062	-	98	51.684	Scophthalmus_maximus
ENSPREG00000003514	-	59	50.280	ENSSDUG00000023775	-	96	51.408	Seriola_dumerili
ENSPREG00000003514	-	100	53.128	ENSSLDG00000006836	-	99	54.667	Seriola_lalandi_dorsalis
ENSPREG00000003514	-	96	54.720	ENSSPAG00000003972	-	97	54.720	Stegastes_partitus
ENSPREG00000003514	-	53	41.358	ENSSSCG00000014291	AFF4	70	36.585	Sus_scrofa
ENSPREG00000003514	-	57	61.194	ENSSSCG00000023593	AFF1	54	61.194	Sus_scrofa
ENSPREG00000003514	-	69	62.712	ENSTGUG00000002726	AFF1	64	62.712	Taeniopygia_guttata
ENSPREG00000003514	-	99	49.364	ENSTRUG00000014005	-	99	48.273	Takifugu_rubripes
ENSPREG00000003514	-	53	44.172	ENSUAMG00000025984	AFF4	50	48.252	Ursus_americanus
ENSPREG00000003514	-	53	39.464	ENSUMAG00000009395	AFF2	51	39.464	Ursus_maritimus
ENSPREG00000003514	-	53	39.752	ENSVPAG00000007247	AFF4	69	35.477	Vicugna_pacos
ENSPREG00000003514	-	56	37.175	ENSXETG00000019630	aff2	50	39.847	Xenopus_tropicalis
ENSPREG00000003514	-	100	90.253	ENSXMAG00000004657	-	100	89.801	Xiphophorus_maculatus