EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003524 (Gene tree)
Gene ID: 103469826
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 13485 bases
Position: chrLG9:10156929-10170413
Accession: 103469826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005027	Ribosomal_L1	PF00687.21	1e-18	1	1
ENSPREP00000005039	Ribosomal_L1	PF00687.21	1.1e-18	1	1
ENSPREP00000005054	Ribosomal_L1	PF00687.21	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005107	-	2600	-	ENSPREP00000005039	326 (aa)	-	-
ENSPRET00000005122	-	2675	-	ENSPREP00000005054	351 (aa)	-	-
ENSPRET00000005095	-	2582	XM_017306480	ENSPREP00000005027	320 (aa)	XP_017161969	UPI0007EABA64

Gene Model

Click here to download ENSPREG00000003524's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003524	mrpl1	99	44.237	ENSG00000169288	MRPL1	98	44.237	Homo_sapiens
ENSPREG00000003524	mrpl1	99	67.722	ENSAPOG00000005831	mrpl1	99	67.405	Acanthochromis_polyacanthus
ENSPREG00000003524	mrpl1	93	71.572	ENSACIG00000002298	mrpl1	100	71.572	Amphilophus_citrinellus
ENSPREG00000003524	mrpl1	99	69.620	ENSAOCG00000006715	mrpl1	99	69.304	Amphiprion_ocellaris
ENSPREG00000003524	mrpl1	99	67.722	ENSAPEG00000020020	mrpl1	99	67.405	Amphiprion_percula
ENSPREG00000003524	mrpl1	99	70.886	ENSATEG00000008760	mrpl1	99	70.886	Anabas_testudineus
ENSPREG00000003524	mrpl1	72	53.680	ENSAPLG00000003428	MRPL1	84	53.680	Anas_platyrhynchos
ENSPREG00000003524	mrpl1	94	44.728	ENSACAG00000012069	MRPL1	60	51.948	Anolis_carolinensis
ENSPREG00000003524	mrpl1	98	42.357	ENSANAG00000035463	-	73	48.729	Aotus_nancymaae
ENSPREG00000003524	mrpl1	71	46.491	ENSANAG00000020317	-	73	46.491	Aotus_nancymaae
ENSPREG00000003524	mrpl1	99	72.727	ENSACLG00000001464	mrpl1	88	72.727	Astatotilapia_calliptera
ENSPREG00000003524	mrpl1	98	54.192	ENSAMXG00000033077	mrpl1	98	54.192	Astyanax_mexicanus
ENSPREG00000003524	mrpl1	98	42.675	ENSCPOG00000031686	MRPL1	97	42.540	Cavia_porcellus
ENSPREG00000003524	mrpl1	100	41.615	ENSCLAG00000005041	MRPL1	98	42.547	Chinchilla_lanigera
ENSPREG00000003524	mrpl1	99	39.875	ENSCANG00000033966	MRPL1	98	39.875	Colobus_angolensis_palliatus
ENSPREG00000003524	mrpl1	99	45.455	ENSCGRG00001005376	-	99	44.848	Cricetulus_griseus_chok1gshd
ENSPREG00000003524	mrpl1	99	45.152	ENSCGRG00000003658	-	99	44.545	Cricetulus_griseus_crigri
ENSPREG00000003524	mrpl1	98	59.744	ENSCSEG00000014014	mrpl1	97	59.744	Cynoglossus_semilaevis
ENSPREG00000003524	mrpl1	98	81.587	ENSCVAG00000021636	mrpl1	98	81.587	Cyprinodon_variegatus
ENSPREG00000003524	mrpl1	98	55.911	ENSDARG00000054606	mrpl1	96	55.911	Danio_rerio
ENSPREG00000003524	mrpl1	99	46.440	ENSDNOG00000001665	MRPL1	97	46.106	Dasypus_novemcinctus
ENSPREG00000003524	mrpl1	99	43.168	ENSDORG00000015752	Mrpl1	75	48.031	Dipodomys_ordii
ENSPREG00000003524	mrpl1	79	39.764	ENSEBUG00000004815	mrpl1	74	38.934	Eptatretus_burgeri
ENSPREG00000003524	mrpl1	100	60.681	ENSELUG00000013391	mrpl1	99	58.514	Esox_lucius
ENSPREG00000003524	mrpl1	99	46.106	ENSFCAG00000013776	MRPL1	98	46.106	Felis_catus
ENSPREG00000003524	mrpl1	87	45.161	ENSFALG00000008527	MRPL1	89	47.222	Ficedula_albicollis
ENSPREG00000003524	mrpl1	98	42.405	ENSFDAG00000011113	MRPL1	76	48.193	Fukomys_damarensis
ENSPREG00000003524	mrpl1	100	79.375	ENSFHEG00000012375	mrpl1	100	79.375	Fundulus_heteroclitus
ENSPREG00000003524	mrpl1	87	45.583	ENSGALG00000010324	MRPL1	71	49.367	Gallus_gallus
ENSPREG00000003524	mrpl1	100	89.062	ENSGAFG00000006089	mrpl1	86	89.062	Gambusia_affinis
ENSPREG00000003524	mrpl1	93	50.974	ENSGAGG00000015092	MRPL1	74	57.438	Gopherus_agassizii
ENSPREG00000003524	mrpl1	78	49.012	ENSGGOG00000001304	MRPL1	78	49.012	Gorilla_gorilla
ENSPREG00000003524	mrpl1	99	72.100	ENSHBUG00000004985	mrpl1	100	72.100	Haplochromis_burtoni
ENSPREG00000003524	mrpl1	100	44.099	ENSHGLG00000006127	MRPL1	99	44.099	Heterocephalus_glaber_female
ENSPREG00000003524	mrpl1	100	44.099	ENSHGLG00100004303	MRPL1	99	44.099	Heterocephalus_glaber_male
ENSPREG00000003524	mrpl1	76	61.885	ENSIPUG00000009866	mrpl1	85	61.134	Ictalurus_punctatus
ENSPREG00000003524	mrpl1	78	49.802	ENSSTOG00000001415	MRPL1	79	49.802	Ictidomys_tridecemlineatus
ENSPREG00000003524	mrpl1	84	48.162	ENSJJAG00000012571	Mrpl1	78	49.206	Jaculus_jaculus
ENSPREG00000003524	mrpl1	98	69.329	ENSKMAG00000004236	mrpl1	99	69.329	Kryptolebias_marmoratus
ENSPREG00000003524	mrpl1	87	66.786	ENSLBEG00000017454	-	90	67.500	Labrus_bergylta
ENSPREG00000003524	mrpl1	91	62.671	ENSLBEG00000013686	-	98	61.953	Labrus_bergylta
ENSPREG00000003524	mrpl1	96	52.258	ENSLACG00000008208	MRPL1	96	51.266	Latimeria_chalumnae
ENSPREG00000003524	mrpl1	98	59.105	ENSLOCG00000007408	mrpl1	97	58.466	Lepisosteus_oculatus
ENSPREG00000003524	mrpl1	51	44.242	ENSMFAG00000030593	MRPL1	79	44.242	Macaca_fascicularis
ENSPREG00000003524	mrpl1	86	44.484	ENSMLEG00000030203	MRPL1	88	46.245	Mandrillus_leucophaeus
ENSPREG00000003524	mrpl1	98	71.429	ENSMAMG00000016943	mrpl1	98	71.429	Mastacembelus_armatus
ENSPREG00000003524	mrpl1	99	73.041	ENSMZEG00005020288	mrpl1	100	73.041	Maylandia_zebra
ENSPREG00000003524	mrpl1	79	48.016	ENSMGAG00000005136	MRPL1	85	48.945	Meleagris_gallopavo
ENSPREG00000003524	mrpl1	86	39.146	ENSMAUG00000019228	Mrpl1	86	39.921	Mesocricetus_auratus
ENSPREG00000003524	mrpl1	68	52.941	ENSMICG00000032729	-	87	52.466	Microcebus_murinus
ENSPREG00000003524	mrpl1	86	48.921	ENSMOCG00000017395	Mrpl1	78	50.198	Microtus_ochrogaster
ENSPREG00000003524	mrpl1	77	47.581	ENSMODG00000011704	MRPL1	87	48.387	Monodelphis_domestica
ENSPREG00000003524	mrpl1	99	70.219	ENSMALG00000006393	mrpl1	100	70.219	Monopterus_albus
ENSPREG00000003524	mrpl1	98	44.099	ENSMUSG00000029486	Mrpl1	96	43.827	Mus_musculus
ENSPREG00000003524	mrpl1	98	46.273	MGP_PahariEiJ_G0017208	Mrpl1	96	45.988	Mus_pahari
ENSPREG00000003524	mrpl1	98	44.620	MGP_SPRETEiJ_G0028427	Mrpl1	96	43.963	Mus_spretus
ENSPREG00000003524	mrpl1	94	46.535	ENSMPUG00000006794	MRPL1	93	46.535	Mustela_putorius_furo
ENSPREG00000003524	mrpl1	77	52.227	ENSNGAG00000015669	Mrpl1	98	46.965	Nannospalax_galili
ENSPREG00000003524	mrpl1	98	73.077	ENSNBRG00000016660	mrpl1	98	73.077	Neolamprologus_brichardi
ENSPREG00000003524	mrpl1	83	46.241	ENSODEG00000004206	MRPL1	79	46.850	Octodon_degus
ENSPREG00000003524	mrpl1	98	74.286	ENSONIG00000014024	mrpl1	97	74.286	Oreochromis_niloticus
ENSPREG00000003524	mrpl1	81	47.566	ENSOANG00000003564	MRPL1	84	51.055	Ornithorhynchus_anatinus
ENSPREG00000003524	mrpl1	79	49.213	ENSOCUG00000003852	MRPL1	78	49.213	Oryctolagus_cuniculus
ENSPREG00000003524	mrpl1	100	66.250	ENSORLG00000018859	mrpl1	96	65.312	Oryzias_latipes
ENSPREG00000003524	mrpl1	100	65.625	ENSOMEG00000010049	mrpl1	100	64.688	Oryzias_melastigma
ENSPREG00000003524	mrpl1	76	50.813	ENSOGAG00000012126	MRPL1	84	49.606	Otolemur_garnettii
ENSPREG00000003524	mrpl1	99	44.237	ENSPPAG00000041378	MRPL1	98	44.237	Pan_paniscus
ENSPREG00000003524	mrpl1	99	46.106	ENSPPRG00000009221	MRPL1	98	46.106	Panthera_pardus
ENSPREG00000003524	mrpl1	99	46.106	ENSPTIG00000015465	MRPL1	98	46.106	Panthera_tigris_altaica
ENSPREG00000003524	mrpl1	99	44.237	ENSPTRG00000016199	MRPL1	98	44.237	Pan_troglodytes
ENSPREG00000003524	mrpl1	99	42.368	ENSPANG00000007832	MRPL1	98	42.368	Papio_anubis
ENSPREG00000003524	mrpl1	98	51.090	ENSPKIG00000019299	mrpl1	97	52.188	Paramormyrops_kingsleyae
ENSPREG00000003524	mrpl1	66	58.962	ENSPSIG00000015906	MRPL1	95	58.962	Pelodiscus_sinensis
ENSPREG00000003524	mrpl1	95	62.783	ENSPMGG00000004020	mrpl1	95	61.514	Periophthalmus_magnuspinnatus
ENSPREG00000003524	mrpl1	99	45.988	ENSPEMG00000018072	-	79	50.593	Peromyscus_maniculatus_bairdii
ENSPREG00000003524	mrpl1	77	46.371	ENSPCIG00000029496	-	75	46.371	Phascolarctos_cinereus
ENSPREG00000003524	mrpl1	100	96.562	ENSPFOG00000013095	mrpl1	98	96.562	Poecilia_formosa
ENSPREG00000003524	mrpl1	100	96.250	ENSPLAG00000019871	mrpl1	100	96.250	Poecilia_latipinna
ENSPREG00000003524	mrpl1	100	96.250	ENSPMEG00000015846	mrpl1	100	96.250	Poecilia_mexicana
ENSPREG00000003524	mrpl1	94	45.066	ENSPPYG00000014870	MRPL1	98	43.302	Pongo_abelii
ENSPREG00000003524	mrpl1	99	72.100	ENSPNYG00000006464	mrpl1	98	72.100	Pundamilia_nyererei
ENSPREG00000003524	mrpl1	95	57.508	ENSPNAG00000018662	mrpl1	98	58.599	Pygocentrus_nattereri
ENSPREG00000003524	mrpl1	99	45.000	ENSRNOG00000002070	Mrpl1	99	45.000	Rattus_norvegicus
ENSPREG00000003524	mrpl1	99	44.860	ENSRNOG00000045785	LOC100359687	98	44.860	Rattus_norvegicus
ENSPREG00000003524	mrpl1	99	42.679	ENSRBIG00000040801	MRPL1	98	42.679	Rhinopithecus_bieti
ENSPREG00000003524	mrpl1	99	42.679	ENSRROG00000041586	MRPL1	98	42.679	Rhinopithecus_roxellana
ENSPREG00000003524	mrpl1	98	45.253	ENSSHAG00000001696	MRPL1	76	51.210	Sarcophilus_harrisii
ENSPREG00000003524	mrpl1	99	52.266	ENSSFOG00015014444	mrpl1	99	51.515	Scleropages_formosus
ENSPREG00000003524	mrpl1	99	69.811	ENSSMAG00000015530	mrpl1	98	69.182	Scophthalmus_maximus
ENSPREG00000003524	mrpl1	100	70.312	ENSSDUG00000018458	mrpl1	99	70.312	Seriola_dumerili
ENSPREG00000003524	mrpl1	100	70.625	ENSSLDG00000000399	mrpl1	92	70.625	Seriola_lalandi_dorsalis
ENSPREG00000003524	mrpl1	80	50.196	ENSSPUG00000002005	MRPL1	76	52.381	Sphenodon_punctatus
ENSPREG00000003524	mrpl1	90	64.360	ENSSPAG00000022922	mrpl1	89	62.457	Stegastes_partitus
ENSPREG00000003524	mrpl1	72	50.000	ENSTGUG00000001739	MRPL1	78	47.809	Taeniopygia_guttata
ENSPREG00000003524	mrpl1	97	63.987	ENSTRUG00000004229	mrpl1	97	63.666	Takifugu_rubripes
ENSPREG00000003524	mrpl1	99	67.085	ENSTNIG00000016716	mrpl1	99	66.144	Tetraodon_nigroviridis
ENSPREG00000003524	mrpl1	96	45.541	ENSUMAG00000007973	MRPL1	93	50.593	Ursus_maritimus
ENSPREG00000003524	mrpl1	80	61.961	ENSXETG00000000373	mrpl1	71	62.295	Xenopus_tropicalis
ENSPREG00000003524	mrpl1	100	86.687	ENSXMAG00000002920	mrpl1	100	86.687	Xiphophorus_maculatus