EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003532 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4403 bases
Position: chrKK215313.1:18771-23173
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005048	zf-C2H2	PF00096.26	1.2e-12	1	2
ENSPREP00000005048	zf-C2H2	PF00096.26	1.2e-12	2	2
ENSPREP00000005048	zf-met	PF12874.7	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005116	-	237	-	ENSPREP00000005048	78 (aa)	-	-

Gene Model

Click here to download ENSPREG00000003532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003532	-	100	64.557	ENSPREG00000003555	-	96	64.557
ENSPREG00000003532	-	100	59.740	ENSPREG00000019972	-	98	59.740
ENSPREG00000003532	-	100	63.462	ENSPREG00000003614	-	99	61.538
ENSPREG00000003532	-	100	56.944	ENSPREG00000013965	-	68	56.944
ENSPREG00000003532	-	100	53.521	ENSPREG00000019161	-	94	55.556
ENSPREG00000003532	-	100	44.872	ENSPREG00000009488	-	75	44.872
ENSPREG00000003532	-	100	66.197	ENSPREG00000020014	-	86	66.197
ENSPREG00000003532	-	100	53.425	ENSPREG00000002715	-	62	52.830
ENSPREG00000003532	-	100	48.052	ENSPREG00000021246	-	70	48.052
ENSPREG00000003532	-	100	60.256	ENSPREG00000019990	-	61	60.256
ENSPREG00000003532	-	94	46.575	ENSPREG00000021924	-	69	46.575
ENSPREG00000003532	-	100	53.425	ENSPREG00000004306	-	94	53.425
ENSPREG00000003532	-	100	50.000	ENSPREG00000010261	zbtb17	61	50.000
ENSPREG00000003532	-	100	55.556	ENSPREG00000008826	-	63	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003532	-	100	48.718	ENSKMAG00000019180	-	53	48.718	Kryptolebias_marmoratus
ENSPREG00000003532	-	100	56.250	ENSLOCG00000018285	-	100	56.250	Lepisosteus_oculatus
ENSPREG00000003532	-	100	48.611	ENSMMOG00000011435	-	66	48.611	Mola_mola
ENSPREG00000003532	-	94	52.083	ENSORLG00000028457	-	76	52.083	Oryzias_latipes
ENSPREG00000003532	-	100	53.846	ENSPNYG00000006306	-	90	53.846	Pundamilia_nyererei
ENSPREG00000003532	-	100	61.818	ENSXCOG00000016589	-	100	61.818	Xiphophorus_couchianus
ENSPREG00000003532	-	100	56.250	ENSXMAG00000022137	-	82	56.250	Xiphophorus_maculatus