EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003544 (Gene tree)
Gene ID: 103475948
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC103475948
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 22881 bases
Position: chrLG14:14540995-14563875
Accession: 103475948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005059	PARP	PF00644.20	4.9e-23	1	1
ENSPREP00000005053	PARP	PF00644.20	5.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005121	-	2376	-	ENSPREP00000005053	791 (aa)	-	-
ENSPRET00000005128	-	2376	XM_008427943	ENSPREP00000005059	791 (aa)	XP_008426165	UPI0004A40A8F

Gene Model

Click here to download ENSPREG00000003544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003544	-	97	38.387	ENSPREG00000007508	-	51	38.387
ENSPREG00000003544	-	68	44.534	ENSPREG00000003531	-	81	54.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003544	-	58	60.870	ENSATEG00000002587	-	54	60.870	Anabas_testudineus
ENSPREG00000003544	-	62	59.322	ENSATEG00000002592	-	54	59.322	Anabas_testudineus
ENSPREG00000003544	-	99	60.543	ENSACLG00000013074	-	60	60.543	Astatotilapia_calliptera
ENSPREG00000003544	-	66	53.738	ENSACLG00000013204	-	76	53.738	Astatotilapia_calliptera
ENSPREG00000003544	-	97	55.814	ENSAMXG00000035876	si:cabz01030277.1	65	55.814	Astyanax_mexicanus
ENSPREG00000003544	-	99	34.160	ENSCVAG00000017536	-	53	34.066	Cyprinodon_variegatus
ENSPREG00000003544	-	82	72.024	ENSCVAG00000014299	-	54	72.024	Cyprinodon_variegatus
ENSPREG00000003544	-	53	43.655	ENSCVAG00000014290	-	85	43.655	Cyprinodon_variegatus
ENSPREG00000003544	-	60	51.793	ENSDARG00000105415	si:ch211-163c2.1	61	52.443	Danio_rerio
ENSPREG00000003544	-	99	52.396	ENSDARG00000099377	si:cabz01030277.1	63	50.602	Danio_rerio
ENSPREG00000003544	-	93	52.716	ENSDARG00000100612	si:ch211-163c2.1	55	53.420	Danio_rerio
ENSPREG00000003544	-	96	35.922	ENSFHEG00000008557	-	55	34.653	Fundulus_heteroclitus
ENSPREG00000003544	-	99	37.500	ENSGAFG00000001814	-	52	46.701	Gambusia_affinis
ENSPREG00000003544	-	99	48.446	ENSIPUG00000008165	si:cabz01030277.1	66	47.716	Ictalurus_punctatus
ENSPREG00000003544	-	99	64.438	ENSKMAG00000000939	-	88	64.438	Kryptolebias_marmoratus
ENSPREG00000003544	-	99	39.096	ENSLOCG00000000942	-	54	39.096	Lepisosteus_oculatus
ENSPREG00000003544	-	99	60.879	ENSMAMG00000014821	si:cabz01030277.1	58	60.669	Mastacembelus_armatus
ENSPREG00000003544	-	85	60.833	ENSMZEG00005021082	-	56	60.833	Maylandia_zebra
ENSPREG00000003544	-	71	57.540	ENSMALG00000015837	-	57	57.540	Monopterus_albus
ENSPREG00000003544	-	61	51.964	ENSORLG00000026291	-	82	51.964	Oryzias_latipes
ENSPREG00000003544	-	99	56.022	ENSORLG00020005938	-	60	56.022	Oryzias_latipes_hni
ENSPREG00000003544	-	61	51.360	ENSORLG00020005917	-	79	51.360	Oryzias_latipes_hni
ENSPREG00000003544	-	97	39.198	ENSOMEG00000022143	-	50	39.198	Oryzias_melastigma
ENSPREG00000003544	-	100	82.772	ENSPFOG00000005470	-	80	78.248	Poecilia_formosa
ENSPREG00000003544	-	67	54.128	ENSPLAG00000004367	-	81	54.128	Poecilia_latipinna
ENSPREG00000003544	-	67	53.823	ENSPMEG00000012541	-	81	53.823	Poecilia_mexicana
ENSPREG00000003544	-	82	56.563	ENSSDUG00000007589	-	52	56.481	Seriola_dumerili
ENSPREG00000003544	-	99	62.343	ENSSPAG00000004785	-	61	62.343	Stegastes_partitus
ENSPREG00000003544	-	64	52.424	ENSXMAG00000027110	-	78	52.424	Xiphophorus_maculatus