EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6267 bases
Position: chrLG14:14547689-14553955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005088	PARP	PF00644.20	1.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005157	-	972	-	ENSPREP00000005088	323 (aa)	-	-

Gene Model

Click here to download ENSPREG00000003560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003560	-	96	45.455	ENSPREG00000017145	-	86	37.462
ENSPREG00000003560	-	50	30.000	ENSPREG00000002810	-	55	30.000
ENSPREG00000003560	-	96	41.824	ENSPREG00000007470	-	99	41.824
ENSPREG00000003560	-	95	47.208	ENSPREG00000019242	-	83	35.647
ENSPREG00000003560	-	56	31.818	ENSPREG00000002953	PARP11	64	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003560	-	95	40.426	ENSAPOG00000021642	-	65	40.426	Acanthochromis_polyacanthus
ENSPREG00000003560	-	97	55.414	ENSAPOG00000007412	-	99	55.414	Acanthochromis_polyacanthus
ENSPREG00000003560	-	97	46.465	ENSACIG00000003944	si:ch211-219a4.3	84	40.810	Amphilophus_citrinellus
ENSPREG00000003560	-	62	72.000	ENSACIG00000009927	-	97	72.000	Amphilophus_citrinellus
ENSPREG00000003560	-	97	64.263	ENSACIG00000009912	-	100	64.263	Amphilophus_citrinellus
ENSPREG00000003560	-	62	47.264	ENSACIG00000020176	-	72	47.264	Amphilophus_citrinellus
ENSPREG00000003560	-	97	58.228	ENSAOCG00000002980	-	99	58.228	Amphiprion_ocellaris
ENSPREG00000003560	-	95	33.850	ENSAOCG00000017389	-	62	33.850	Amphiprion_ocellaris
ENSPREG00000003560	-	98	49.246	ENSAPEG00000001687	-	65	40.244	Amphiprion_percula
ENSPREG00000003560	-	97	65.672	ENSAPEG00000003728	-	54	65.672	Amphiprion_percula
ENSPREG00000003560	-	99	68.000	ENSATEG00000002598	-	53	68.000	Anabas_testudineus
ENSPREG00000003560	-	97	64.939	ENSACLG00000013093	-	100	64.939	Astatotilapia_calliptera
ENSPREG00000003560	-	99	69.000	ENSACLG00000013116	-	53	69.000	Astatotilapia_calliptera
ENSPREG00000003560	-	61	69.543	ENSACLG00000013170	-	90	69.543	Astatotilapia_calliptera
ENSPREG00000003560	-	98	42.424	ENSACLG00000005418	-	96	37.846	Astatotilapia_calliptera
ENSPREG00000003560	-	96	49.000	ENSACLG00000001129	-	64	37.658	Astatotilapia_calliptera
ENSPREG00000003560	-	95	43.147	ENSCSEG00000017936	si:ch211-219a4.3	84	38.535	Cynoglossus_semilaevis
ENSPREG00000003560	-	99	41.888	ENSCSEG00000020071	-	92	41.888	Cynoglossus_semilaevis
ENSPREG00000003560	-	97	69.427	ENSCVAG00000014329	-	98	69.427	Cyprinodon_variegatus
ENSPREG00000003560	-	61	46.701	ENSCVAG00000017520	-	83	46.701	Cyprinodon_variegatus
ENSPREG00000003560	-	99	59.000	ENSDARG00000099377	si:cabz01030277.1	52	59.000	Danio_rerio
ENSPREG00000003560	-	99	39.013	ENSEBUG00000002611	-	54	39.013	Eptatretus_burgeri
ENSPREG00000003560	-	95	45.729	ENSFHEG00000008557	-	50	45.729	Fundulus_heteroclitus
ENSPREG00000003560	-	62	62.312	ENSFHEG00000008820	-	87	62.312	Fundulus_heteroclitus
ENSPREG00000003560	-	95	38.390	ENSGMOG00000011231	-	97	38.390	Gadus_morhua
ENSPREG00000003560	-	98	46.734	ENSGAFG00000001814	-	85	39.091	Gambusia_affinis
ENSPREG00000003560	-	98	83.648	ENSGAFG00000002533	-	100	83.648	Gambusia_affinis
ENSPREG00000003560	-	96	43.478	ENSGAFG00000001802	-	65	43.478	Gambusia_affinis
ENSPREG00000003560	-	95	44.670	ENSGACG00000002353	si:ch211-219a4.3	51	44.670	Gasterosteus_aculeatus
ENSPREG00000003560	-	96	49.000	ENSHBUG00000018235	-	65	41.270	Haplochromis_burtoni
ENSPREG00000003560	-	98	39.241	ENSHBUG00000005369	-	90	39.241	Haplochromis_burtoni
ENSPREG00000003560	-	97	66.984	ENSKMAG00000003908	-	100	66.984	Kryptolebias_marmoratus
ENSPREG00000003560	-	99	67.178	ENSKMAG00000012870	-	95	67.178	Kryptolebias_marmoratus
ENSPREG00000003560	-	61	41.709	ENSLACG00000009107	-	97	41.709	Latimeria_chalumnae
ENSPREG00000003560	-	95	50.251	ENSLACG00000001018	-	51	50.251	Latimeria_chalumnae
ENSPREG00000003560	-	97	45.455	ENSMZEG00005025678	si:ch211-219a4.3	91	40.187	Maylandia_zebra
ENSPREG00000003560	-	99	56.875	ENSMZEG00005026601	-	92	56.875	Maylandia_zebra
ENSPREG00000003560	-	98	34.530	ENSMZEG00005025708	-	57	33.607	Maylandia_zebra
ENSPREG00000003560	-	62	40.488	ENSMODG00000007157	-	63	40.488	Monodelphis_domestica
ENSPREG00000003560	-	53	60.234	ENSMALG00000017146	-	82	60.234	Monopterus_albus
ENSPREG00000003560	-	54	58.523	ENSMALG00000000434	-	86	58.523	Monopterus_albus
ENSPREG00000003560	-	96	40.952	ENSNBRG00000005232	-	65	40.952	Neolamprologus_brichardi
ENSPREG00000003560	-	59	70.157	ENSNBRG00000004048	-	100	70.157	Neolamprologus_brichardi
ENSPREG00000003560	-	80	63.019	ENSNBRG00000004017	-	92	69.388	Neolamprologus_brichardi
ENSPREG00000003560	-	86	62.724	ENSNBRG00000003877	-	95	62.724	Neolamprologus_brichardi
ENSPREG00000003560	-	99	58.631	ENSONIG00000017776	-	96	58.631	Oreochromis_niloticus
ENSPREG00000003560	-	98	44.162	ENSONIG00000004517	-	53	44.162	Oreochromis_niloticus
ENSPREG00000003560	-	96	44.444	ENSORLG00015021971	si:ch211-219a4.3	89	41.270	Oryzias_latipes_hsok
ENSPREG00000003560	-	81	68.061	ENSORLG00015003387	-	77	68.061	Oryzias_latipes_hsok
ENSPREG00000003560	-	97	45.960	ENSOMEG00000019715	si:ch211-219a4.3	90	41.009	Oryzias_melastigma
ENSPREG00000003560	-	99	60.062	ENSOMEG00000016369	-	93	60.062	Oryzias_melastigma
ENSPREG00000003560	-	98	65.625	ENSOMEG00000016395	-	100	65.625	Oryzias_melastigma
ENSPREG00000003560	-	62	65.327	ENSOMEG00000016408	-	60	65.327	Oryzias_melastigma
ENSPREG00000003560	-	100	65.231	ENSOMEG00000016380	-	93	65.231	Oryzias_melastigma
ENSPREG00000003560	-	61	44.444	ENSPKIG00000004135	-	56	44.444	Paramormyrops_kingsleyae
ENSPREG00000003560	-	62	57.000	ENSPMGG00000017987	-	91	57.000	Periophthalmus_magnuspinnatus
ENSPREG00000003560	-	97	36.119	ENSPMGG00000004482	-	88	36.119	Periophthalmus_magnuspinnatus
ENSPREG00000003560	-	61	48.731	ENSPFOG00000021893	-	51	48.731	Poecilia_formosa
ENSPREG00000003560	-	63	44.554	ENSPLAG00000023515	-	71	44.554	Poecilia_latipinna
ENSPREG00000003560	-	84	77.174	ENSPLAG00000004362	-	97	77.174	Poecilia_latipinna
ENSPREG00000003560	-	84	88.060	ENSPMEG00000012524	-	50	88.060	Poecilia_mexicana
ENSPREG00000003560	-	63	45.813	ENSPMEG00000004356	-	71	45.813	Poecilia_mexicana
ENSPREG00000003560	-	97	44.949	ENSPNYG00000013937	-	91	39.875	Pundamilia_nyererei
ENSPREG00000003560	-	97	65.517	ENSPNYG00000021303	-	99	65.517	Pundamilia_nyererei
ENSPREG00000003560	-	98	37.003	ENSPNYG00000001714	-	90	37.003	Pundamilia_nyererei
ENSPREG00000003560	-	99	56.875	ENSPNYG00000021378	-	92	56.875	Pundamilia_nyererei
ENSPREG00000003560	-	94	48.500	ENSSFOG00015001605	-	67	48.731	Scleropages_formosus
ENSPREG00000003560	-	96	43.750	ENSSFOG00015012828	-	80	43.750	Scleropages_formosus
ENSPREG00000003560	-	82	70.000	ENSSMAG00000007826	-	51	70.000	Scophthalmus_maximus
ENSPREG00000003560	-	95	48.241	ENSSDUG00000001575	-	78	39.130	Seriola_dumerili
ENSPREG00000003560	-	97	69.500	ENSSDUG00000007576	-	53	69.500	Seriola_dumerili
ENSPREG00000003560	-	95	48.500	ENSSLDG00000005702	-	63	34.574	Seriola_lalandi_dorsalis
ENSPREG00000003560	-	62	69.500	ENSSLDG00000005960	-	55	69.500	Seriola_lalandi_dorsalis
ENSPREG00000003560	-	96	40.256	ENSTRUG00000004579	-	89	40.256	Takifugu_rubripes
ENSPREG00000003560	-	96	40.823	ENSUAMG00000004120	-	80	40.823	Ursus_americanus
ENSPREG00000003560	-	61	48.000	ENSXETG00000010161	parp14.3	65	48.000	Xenopus_tropicalis
ENSPREG00000003560	-	95	47.208	ENSXCOG00000014707	-	89	40.506	Xiphophorus_couchianus
ENSPREG00000003560	-	96	35.780	ENSXCOG00000006581	-	89	35.780	Xiphophorus_couchianus
ENSPREG00000003560	-	59	82.292	ENSXMAG00000010352	-	82	82.292	Xiphophorus_maculatus
ENSPREG00000003560	-	99	88.060	ENSXMAG00000001866	-	54	88.060	Xiphophorus_maculatus