EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003561 (Gene tree)
Gene ID: 103469825
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9010 bases
Position: chrLG9:10173989-10182998
Accession: 103469825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005087	Exo_endo_phos	PF03372.23	1.9e-19	1	1
ENSPREP00000005095	Exo_endo_phos	PF03372.23	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005164	-	1678	-	ENSPREP00000005095	555 (aa)	-	-
ENSPRET00000005156	-	1669	XM_008417774	ENSPREP00000005087	552 (aa)	XP_008415996	UPI0004A2BE57

Gene Model

Click here to download ENSPREG00000003561's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003561	cnot6l	100	73.968	ENSPREG00000003713	cnot6b	100	73.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003561	cnot6l	100	84.324	ENSG00000138767	CNOT6L	100	91.772	Homo_sapiens
ENSPREG00000003561	cnot6l	100	94.937	ENSAPOG00000005894	cnot6l	100	94.937	Acanthochromis_polyacanthus
ENSPREG00000003561	cnot6l	100	84.144	ENSAMEG00000005570	CNOT6L	99	84.144	Ailuropoda_melanoleuca
ENSPREG00000003561	cnot6l	100	95.118	ENSACIG00000002515	cnot6l	100	95.118	Amphilophus_citrinellus
ENSPREG00000003561	cnot6l	100	91.501	ENSAOCG00000006705	cnot6l	100	91.501	Amphiprion_ocellaris
ENSPREG00000003561	cnot6l	100	89.693	ENSAPEG00000020035	cnot6l	100	89.693	Amphiprion_percula
ENSPREG00000003561	cnot6l	100	94.937	ENSATEG00000008774	cnot6l	100	94.937	Anabas_testudineus
ENSPREG00000003561	cnot6l	100	83.214	ENSAPLG00000003448	CNOT6L	100	83.214	Anas_platyrhynchos
ENSPREG00000003561	cnot6l	99	84.268	ENSACAG00000012099	CNOT6L	99	84.268	Anolis_carolinensis
ENSPREG00000003561	cnot6l	100	84.324	ENSANAG00000023917	CNOT6L	99	84.324	Aotus_nancymaae
ENSPREG00000003561	cnot6l	100	93.852	ENSACLG00000000879	cnot6l	100	93.852	Astatotilapia_calliptera
ENSPREG00000003561	cnot6l	100	88.969	ENSAMXG00000008943	cnot6l	98	88.969	Astyanax_mexicanus
ENSPREG00000003561	cnot6l	100	84.324	ENSBTAG00000049571	CNOT6L	99	84.324	Bos_taurus
ENSPREG00000003561	cnot6l	100	84.324	ENSCJAG00000014846	CNOT6L	99	84.324	Callithrix_jacchus
ENSPREG00000003561	cnot6l	100	84.324	ENSCAFG00000008699	CNOT6L	99	84.324	Canis_familiaris
ENSPREG00000003561	cnot6l	100	84.239	ENSCAFG00020011108	CNOT6L	100	84.239	Canis_lupus_dingo
ENSPREG00000003561	cnot6l	100	84.324	ENSCHIG00000006297	CNOT6L	99	84.324	Capra_hircus
ENSPREG00000003561	cnot6l	100	84.324	ENSTSYG00000009068	CNOT6L	100	84.324	Carlito_syrichta
ENSPREG00000003561	cnot6l	86	89.474	ENSCPOG00000010337	CNOT6L	99	89.474	Cavia_porcellus
ENSPREG00000003561	cnot6l	100	84.324	ENSCCAG00000025000	CNOT6L	99	84.324	Cebus_capucinus
ENSPREG00000003561	cnot6l	100	84.324	ENSCATG00000029623	CNOT6L	99	84.324	Cercocebus_atys
ENSPREG00000003561	cnot6l	100	83.964	ENSCLAG00000004598	CNOT6L	99	83.964	Chinchilla_lanigera
ENSPREG00000003561	cnot6l	100	84.324	ENSCSAG00000004580	CNOT6L	99	84.324	Chlorocebus_sabaeus
ENSPREG00000003561	cnot6l	74	75.342	ENSCHOG00000001108	-	69	75.342	Choloepus_hoffmanni
ENSPREG00000003561	cnot6l	100	83.604	ENSCPBG00000019403	CNOT6L	100	83.604	Chrysemys_picta_bellii
ENSPREG00000003561	cnot6l	100	84.324	ENSCANG00000028583	CNOT6L	99	84.324	Colobus_angolensis_palliatus
ENSPREG00000003561	cnot6l	100	83.423	ENSCGRG00001022099	Cnot6l	100	83.423	Cricetulus_griseus_chok1gshd
ENSPREG00000003561	cnot6l	100	82.703	ENSCGRG00000000543	Cnot6l	100	82.703	Cricetulus_griseus_crigri
ENSPREG00000003561	cnot6l	100	90.235	ENSCSEG00000014001	cnot6l	100	90.235	Cynoglossus_semilaevis
ENSPREG00000003561	cnot6l	75	88.489	ENSCSEG00000010395	-	98	88.489	Cynoglossus_semilaevis
ENSPREG00000003561	cnot6l	98	95.185	ENSCVAG00000021683	cnot6l	97	95.185	Cyprinodon_variegatus
ENSPREG00000003561	cnot6l	99	90.036	ENSDARG00000054597	cnot6l	98	90.036	Danio_rerio
ENSPREG00000003561	cnot6l	100	75.850	ENSDNOG00000004229	CNOT6L	99	78.834	Dasypus_novemcinctus
ENSPREG00000003561	cnot6l	100	75.135	ENSDORG00000011458	Cnot6l	100	75.135	Dipodomys_ordii
ENSPREG00000003561	cnot6l	100	71.048	ENSEBUG00000004849	cnot6l	100	71.048	Eptatretus_burgeri
ENSPREG00000003561	cnot6l	88	84.725	ENSEASG00005016429	CNOT6L	93	84.725	Equus_asinus_asinus
ENSPREG00000003561	cnot6l	94	83.654	ENSECAG00000001582	CNOT6L	87	85.685	Equus_caballus
ENSPREG00000003561	cnot6l	99	90.217	ENSELUG00000013353	cnot6l	87	90.217	Esox_lucius
ENSPREG00000003561	cnot6l	100	84.324	ENSFCAG00000008322	CNOT6L	99	84.324	Felis_catus
ENSPREG00000003561	cnot6l	100	84.838	ENSFALG00000008515	CNOT6L	99	84.838	Ficedula_albicollis
ENSPREG00000003561	cnot6l	100	84.505	ENSFDAG00000007719	CNOT6L	95	84.505	Fukomys_damarensis
ENSPREG00000003561	cnot6l	100	87.027	ENSFHEG00000012364	cnot6l	100	87.027	Fundulus_heteroclitus
ENSPREG00000003561	cnot6l	91	66.535	ENSGMOG00000011077	-	99	66.535	Gadus_morhua
ENSPREG00000003561	cnot6l	87	80.167	ENSGMOG00000000730	cnot6l	99	80.167	Gadus_morhua
ENSPREG00000003561	cnot6l	100	83.755	ENSGALG00000010333	CNOT6L	90	83.755	Gallus_gallus
ENSPREG00000003561	cnot6l	97	98.502	ENSGAFG00000006105	cnot6l	99	98.502	Gambusia_affinis
ENSPREG00000003561	cnot6l	88	83.878	ENSGAGG00000008605	CNOT6L	93	84.886	Gopherus_agassizii
ENSPREG00000003561	cnot6l	100	84.324	ENSGGOG00000023412	CNOT6L	98	84.324	Gorilla_gorilla
ENSPREG00000003561	cnot6l	100	94.033	ENSHBUG00000004755	cnot6l	95	94.375	Haplochromis_burtoni
ENSPREG00000003561	cnot6l	100	84.144	ENSHGLG00000006452	CNOT6L	100	84.144	Heterocephalus_glaber_female
ENSPREG00000003561	cnot6l	100	84.144	ENSHGLG00100012384	CNOT6L	98	84.144	Heterocephalus_glaber_male
ENSPREG00000003561	cnot6l	100	79.860	ENSHCOG00000009512	cnot6l	100	80.385	Hippocampus_comes
ENSPREG00000003561	cnot6l	100	87.703	ENSIPUG00000009879	cnot6l	100	87.703	Ictalurus_punctatus
ENSPREG00000003561	cnot6l	100	84.324	ENSSTOG00000015293	CNOT6L	100	84.324	Ictidomys_tridecemlineatus
ENSPREG00000003561	cnot6l	100	83.784	ENSJJAG00000020583	Cnot6l	99	83.784	Jaculus_jaculus
ENSPREG00000003561	cnot6l	100	93.128	ENSKMAG00000004165	cnot6l	100	93.128	Kryptolebias_marmoratus
ENSPREG00000003561	cnot6l	100	91.501	ENSLBEG00000027202	cnot6l	100	91.501	Labrus_bergylta
ENSPREG00000003561	cnot6l	100	83.964	ENSLACG00000004684	CNOT6L	100	83.964	Latimeria_chalumnae
ENSPREG00000003561	cnot6l	100	84.810	ENSLOCG00000007420	cnot6l	92	84.810	Lepisosteus_oculatus
ENSPREG00000003561	cnot6l	100	84.324	ENSLAFG00000011449	CNOT6L	100	82.540	Loxodonta_africana
ENSPREG00000003561	cnot6l	100	84.324	ENSMFAG00000044296	CNOT6L	99	84.324	Macaca_fascicularis
ENSPREG00000003561	cnot6l	100	84.324	ENSMMUG00000045609	CNOT6L	98	84.324	Macaca_mulatta
ENSPREG00000003561	cnot6l	100	84.324	ENSMNEG00000041259	CNOT6L	100	84.324	Macaca_nemestrina
ENSPREG00000003561	cnot6l	100	84.324	ENSMLEG00000029198	CNOT6L	98	84.324	Mandrillus_leucophaeus
ENSPREG00000003561	cnot6l	99	94.746	ENSMAMG00000016954	cnot6l	98	94.746	Mastacembelus_armatus
ENSPREG00000003561	cnot6l	100	93.852	ENSMZEG00005020235	cnot6l	100	93.852	Maylandia_zebra
ENSPREG00000003561	cnot6l	100	83.755	ENSMGAG00000005144	CNOT6L	99	83.755	Meleagris_gallopavo
ENSPREG00000003561	cnot6l	100	83.964	ENSMICG00000017026	CNOT6L	99	83.964	Microcebus_murinus
ENSPREG00000003561	cnot6l	100	83.423	ENSMOCG00000009451	Cnot6l	99	83.423	Microtus_ochrogaster
ENSPREG00000003561	cnot6l	100	94.213	ENSMMOG00000014621	cnot6l	100	94.213	Mola_mola
ENSPREG00000003561	cnot6l	100	83.964	ENSMODG00000011744	CNOT6L	75	83.964	Monodelphis_domestica
ENSPREG00000003561	cnot6l	100	92.780	ENSMALG00000006354	cnot6l	100	94.585	Monopterus_albus
ENSPREG00000003561	cnot6l	100	83.423	MGP_CAROLIEiJ_G0027429	Cnot6l	99	85.092	Mus_caroli
ENSPREG00000003561	cnot6l	100	83.423	ENSMUSG00000034724	Cnot6l	99	85.092	Mus_musculus
ENSPREG00000003561	cnot6l	100	83.423	MGP_PahariEiJ_G0017207	Cnot6l	100	83.423	Mus_pahari
ENSPREG00000003561	cnot6l	100	83.423	MGP_SPRETEiJ_G0028426	Cnot6l	100	83.423	Mus_spretus
ENSPREG00000003561	cnot6l	94	80.688	ENSMPUG00000003895	CNOT6L	99	80.688	Mustela_putorius_furo
ENSPREG00000003561	cnot6l	93	83.622	ENSMLUG00000000936	CNOT6L	100	83.622	Myotis_lucifugus
ENSPREG00000003561	cnot6l	100	83.243	ENSNGAG00000019803	Cnot6l	100	83.243	Nannospalax_galili
ENSPREG00000003561	cnot6l	90	91.952	ENSNBRG00000016345	cnot6l	81	91.348	Neolamprologus_brichardi
ENSPREG00000003561	cnot6l	100	84.324	ENSNLEG00000028820	CNOT6L	99	84.324	Nomascus_leucogenys
ENSPREG00000003561	cnot6l	80	70.628	ENSMEUG00000009767	-	77	70.429	Notamacropus_eugenii
ENSPREG00000003561	cnot6l	100	84.144	ENSODEG00000004161	CNOT6L	99	84.144	Octodon_degus
ENSPREG00000003561	cnot6l	100	93.548	ENSONIG00000013992	cnot6l	97	93.548	Oreochromis_niloticus
ENSPREG00000003561	cnot6l	100	83.784	ENSOANG00000003561	CNOT6L	100	83.964	Ornithorhynchus_anatinus
ENSPREG00000003561	cnot6l	100	84.324	ENSOCUG00000002497	CNOT6L	99	84.324	Oryctolagus_cuniculus
ENSPREG00000003561	cnot6l	100	89.873	ENSORLG00000018874	cnot6l	100	89.873	Oryzias_latipes
ENSPREG00000003561	cnot6l	100	90.054	ENSOMEG00000010026	cnot6l	100	90.054	Oryzias_melastigma
ENSPREG00000003561	cnot6l	100	81.071	ENSOGAG00000012122	CNOT6L	100	79.643	Otolemur_garnettii
ENSPREG00000003561	cnot6l	100	84.324	ENSOARG00000017771	CNOT6L	99	84.324	Ovis_aries
ENSPREG00000003561	cnot6l	84	89.474	ENSPPAG00000034242	-	98	89.474	Pan_paniscus
ENSPREG00000003561	cnot6l	100	81.441	ENSPPAG00000030178	-	100	81.441	Pan_paniscus
ENSPREG00000003561	cnot6l	100	84.324	ENSPPRG00000008857	CNOT6L	99	84.324	Panthera_pardus
ENSPREG00000003561	cnot6l	100	84.324	ENSPTIG00000015698	CNOT6L	99	84.324	Panthera_tigris_altaica
ENSPREG00000003561	cnot6l	100	84.324	ENSPTRG00000016198	CNOT6L	99	84.324	Pan_troglodytes
ENSPREG00000003561	cnot6l	84	89.474	ENSPTRG00000045291	-	99	89.474	Pan_troglodytes
ENSPREG00000003561	cnot6l	100	84.324	ENSPANG00000007831	CNOT6L	99	84.324	Papio_anubis
ENSPREG00000003561	cnot6l	100	88.608	ENSPKIG00000002892	cnot6l	100	88.608	Paramormyrops_kingsleyae
ENSPREG00000003561	cnot6l	100	82.883	ENSPSIG00000016241	CNOT6L	99	83.423	Pelodiscus_sinensis
ENSPREG00000003561	cnot6l	100	84.657	ENSPMGG00000004021	cnot6l	100	84.657	Periophthalmus_magnuspinnatus
ENSPREG00000003561	cnot6l	100	83.423	ENSPEMG00000011554	Cnot6l	100	83.423	Peromyscus_maniculatus_bairdii
ENSPREG00000003561	cnot6l	97	69.094	ENSPMAG00000005706	cnot6l	97	70.909	Petromyzon_marinus
ENSPREG00000003561	cnot6l	100	83.243	ENSPCIG00000027504	-	100	83.243	Phascolarctos_cinereus
ENSPREG00000003561	cnot6l	100	98.732	ENSPFOG00000013163	cnot6l	100	98.732	Poecilia_formosa
ENSPREG00000003561	cnot6l	100	98.732	ENSPLAG00000019862	cnot6l	100	98.732	Poecilia_latipinna
ENSPREG00000003561	cnot6l	100	98.551	ENSPMEG00000015834	cnot6l	100	98.551	Poecilia_mexicana
ENSPREG00000003561	cnot6l	100	84.324	ENSPPYG00000014869	CNOT6L	100	84.324	Pongo_abelii
ENSPREG00000003561	cnot6l	100	54.595	ENSPCAG00000016617	CNOT6L	81	89.189	Procavia_capensis
ENSPREG00000003561	cnot6l	100	84.324	ENSPCOG00000014669	CNOT6L	99	84.324	Propithecus_coquereli
ENSPREG00000003561	cnot6l	83	86.486	ENSPVAG00000002690	CNOT6L	78	86.486	Pteropus_vampyrus
ENSPREG00000003561	cnot6l	91	91.451	ENSPNYG00000006717	cnot6l	92	91.451	Pundamilia_nyererei
ENSPREG00000003561	cnot6l	100	88.969	ENSPNAG00000003537	cnot6l	98	88.969	Pygocentrus_nattereri
ENSPREG00000003561	cnot6l	100	83.423	ENSRNOG00000002075	Cnot6l	100	83.423	Rattus_norvegicus
ENSPREG00000003561	cnot6l	100	84.324	ENSRBIG00000027644	CNOT6L	99	84.324	Rhinopithecus_bieti
ENSPREG00000003561	cnot6l	100	84.505	ENSRROG00000031003	CNOT6L	100	84.505	Rhinopithecus_roxellana
ENSPREG00000003561	cnot6l	100	84.324	ENSSBOG00000028521	CNOT6L	100	84.324	Saimiri_boliviensis_boliviensis
ENSPREG00000003561	cnot6l	100	83.784	ENSSHAG00000006072	CNOT6L	99	83.784	Sarcophilus_harrisii
ENSPREG00000003561	cnot6l	100	88.427	ENSSFOG00015019044	cnot6l	100	88.427	Scleropages_formosus
ENSPREG00000003561	cnot6l	100	90.778	ENSSMAG00000015568	cnot6l	100	90.778	Scophthalmus_maximus
ENSPREG00000003561	cnot6l	100	94.213	ENSSDUG00000018426	cnot6l	100	94.213	Seriola_dumerili
ENSPREG00000003561	cnot6l	100	94.033	ENSSLDG00000000335	cnot6l	100	94.033	Seriola_lalandi_dorsalis
ENSPREG00000003561	cnot6l	100	83.423	ENSSPUG00000002016	CNOT6L	100	83.423	Sphenodon_punctatus
ENSPREG00000003561	cnot6l	100	95.298	ENSSPAG00000022932	cnot6l	100	95.298	Stegastes_partitus
ENSPREG00000003561	cnot6l	100	84.505	ENSSSCG00000008989	CNOT6L	100	84.505	Sus_scrofa
ENSPREG00000003561	cnot6l	100	84.477	ENSTGUG00000001737	-	99	84.477	Taeniopygia_guttata
ENSPREG00000003561	cnot6l	100	93.128	ENSTRUG00000004332	cnot6l	100	93.128	Takifugu_rubripes
ENSPREG00000003561	cnot6l	100	91.863	ENSTNIG00000016717	cnot6l	100	91.863	Tetraodon_nigroviridis
ENSPREG00000003561	cnot6l	88	79.633	ENSTBEG00000016519	CNOT6L	97	79.633	Tupaia_belangeri
ENSPREG00000003561	cnot6l	87	85.270	ENSTTRG00000005606	CNOT6L	99	85.270	Tursiops_truncatus
ENSPREG00000003561	cnot6l	100	84.144	ENSUAMG00000026982	CNOT6L	100	84.144	Ursus_americanus
ENSPREG00000003561	cnot6l	100	84.144	ENSUMAG00000007955	CNOT6L	99	84.144	Ursus_maritimus
ENSPREG00000003561	cnot6l	100	80.721	ENSVPAG00000010892	CNOT6L	99	80.721	Vicugna_pacos
ENSPREG00000003561	cnot6l	100	84.324	ENSVVUG00000024858	CNOT6L	100	88.757	Vulpes_vulpes
ENSPREG00000003561	cnot6l	100	82.703	ENSXETG00000000372	cnot6l	99	82.703	Xenopus_tropicalis
ENSPREG00000003561	cnot6l	100	98.007	ENSXMAG00000002900	cnot6l	100	98.007	Xiphophorus_maculatus