EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003658 (Gene tree)
Gene ID: 103481507
Gene Symbol: srsf2a
Alias: PR264|SC-35|SC35|SFRS2|SFRS2A
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2435 bases
Position: chrLG19:11465518-11467952
Accession: 103481507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005243	RRM_1	PF00076.22	8.9e-21	1	1
ENSPREP00000005249	RRM_1	PF00076.22	8.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005312	-	823	XM_008436991	ENSPREP00000005243	236 (aa)	XP_008435213	UPI0004A3AA04
ENSPRET00000005318	-	1045	XM_017310981	ENSPREP00000005249	236 (aa)	XP_017166470	UPI0004A3AA04

Gene Model

Click here to download ENSPREG00000003658's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG
pret05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003658	srsf2a	57	77.612	ENSG00000161547	SRSF2	86	93.860	Homo_sapiens
ENSPREG00000003658	srsf2a	53	82.031	ENSAPOG00000008073	srsf2b	53	86.207	Acanthochromis_polyacanthus
ENSPREG00000003658	srsf2a	57	64.925	ENSAMEG00000013624	-	50	90.909	Ailuropoda_melanoleuca
ENSPREG00000003658	srsf2a	77	71.823	ENSAMXG00000042718	srsf2a	53	96.429	Astyanax_mexicanus
ENSPREG00000003658	srsf2a	99	58.723	ENSCHOG00000014019	-	53	91.667	Choloepus_hoffmanni
ENSPREG00000003658	srsf2a	100	95.339	ENSCVAG00000022056	srsf2a	100	95.339	Cyprinodon_variegatus
ENSPREG00000003658	srsf2a	50	97.458	ENSDARG00000057484	srsf2a	100	97.458	Danio_rerio
ENSPREG00000003658	srsf2a	73	52.809	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSPREG00000003658	srsf2a	100	98.305	ENSFHEG00000010835	srsf2a	100	98.305	Fundulus_heteroclitus
ENSPREG00000003658	srsf2a	76	78.771	ENSLOCG00000011252	srsf2a	53	93.860	Lepisosteus_oculatus
ENSPREG00000003658	srsf2a	50	57.983	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSPREG00000003658	srsf2a	82	69.430	ENSNBRG00000021086	srsf2b	54	89.565	Neolamprologus_brichardi
ENSPREG00000003658	srsf2a	54	70.229	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSPREG00000003658	srsf2a	56	77.273	ENSPMGG00000006860	-	60	96.000	Periophthalmus_magnuspinnatus
ENSPREG00000003658	srsf2a	100	97.500	ENSPFOG00000020356	srsf2a	100	97.500	Poecilia_formosa
ENSPREG00000003658	srsf2a	100	98.319	ENSPLAG00000001856	srsf2a	100	98.319	Poecilia_latipinna
ENSPREG00000003658	srsf2a	100	97.500	ENSPMEG00000008714	srsf2a	100	97.500	Poecilia_mexicana
ENSPREG00000003658	srsf2a	82	72.165	ENSSPUG00000007582	-	50	94.340	Sphenodon_punctatus
ENSPREG00000003658	srsf2a	61	63.194	ENSSSCG00000012212	-	56	70.909	Sus_scrofa
ENSPREG00000003658	srsf2a	51	86.992	ENSTRUG00000024363	srsf2b	50	88.596	Takifugu_rubripes
ENSPREG00000003658	srsf2a	100	79.661	ENSXCOG00000005917	srsf2a	52	100.000	Xiphophorus_couchianus
ENSPREG00000003658	srsf2a	100	99.153	ENSXMAG00000015676	srsf2a	100	99.153	Xiphophorus_maculatus