EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000003708 (Gene tree)
Gene ID: 103458665
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5300 bases
Position: chrLG2:30159609-30164908
Accession: 103458665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005438	RRM_1	PF00076.22	4.3e-13	1	1
ENSPREP00000005438	RRM_3	PF08777.11	5.1e-29	1	1
ENSPREP00000005438	La	PF05383.17	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005513	-	1149	XM_008399648	ENSPREP00000005438	382 (aa)	XP_008397870	-

Gene Model

Click here to download ENSPREG00000003708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003708	ssb	99	56.955	ENSG00000138385	SSB	98	61.864	Homo_sapiens
ENSPREG00000003708	ssb	98	86.595	ENSAPOG00000003448	ssb	97	86.828	Acanthochromis_polyacanthus
ENSPREG00000003708	ssb	99	55.556	ENSAMEG00000010507	SSB	94	55.556	Ailuropoda_melanoleuca
ENSPREG00000003708	ssb	99	79.420	ENSACIG00000001738	ssb	97	79.420	Amphilophus_citrinellus
ENSPREG00000003708	ssb	98	86.595	ENSAOCG00000020398	ssb	97	86.828	Amphiprion_ocellaris
ENSPREG00000003708	ssb	98	86.595	ENSAPEG00000020395	ssb	97	86.828	Amphiprion_percula
ENSPREG00000003708	ssb	97	83.333	ENSATEG00000016884	ssb	93	83.333	Anabas_testudineus
ENSPREG00000003708	ssb	99	54.500	ENSAPLG00000006109	SSB	94	54.637	Anas_platyrhynchos
ENSPREG00000003708	ssb	96	55.435	ENSACAG00000017008	SSB	92	54.712	Anolis_carolinensis
ENSPREG00000003708	ssb	98	51.058	ENSANAG00000027195	-	92	50.131	Aotus_nancymaae
ENSPREG00000003708	ssb	97	76.694	ENSACLG00000010798	ssb	99	73.228	Astatotilapia_calliptera
ENSPREG00000003708	ssb	96	63.215	ENSAMXG00000012606	ssb	91	63.733	Astyanax_mexicanus
ENSPREG00000003708	ssb	98	58.201	ENSBTAG00000008716	SSB	93	57.937	Bos_taurus
ENSPREG00000003708	ssb	78	35.082	WBGene00016653	C44E4.4	76	35.082	Caenorhabditis_elegans
ENSPREG00000003708	ssb	99	57.292	ENSCJAG00000045073	SSB	85	66.087	Callithrix_jacchus
ENSPREG00000003708	ssb	99	57.552	ENSCAFG00000012418	SSB	94	57.292	Canis_familiaris
ENSPREG00000003708	ssb	99	57.552	ENSCAFG00020002900	SSB	94	57.292	Canis_lupus_dingo
ENSPREG00000003708	ssb	99	53.646	ENSCHIG00000022196	-	83	58.133	Capra_hircus
ENSPREG00000003708	ssb	99	57.812	ENSCHIG00000022624	-	94	57.552	Capra_hircus
ENSPREG00000003708	ssb	99	57.292	ENSTSYG00000000097	SSB	94	57.031	Carlito_syrichta
ENSPREG00000003708	ssb	99	57.812	ENSCPOG00000003338	SSB	94	57.552	Cavia_porcellus
ENSPREG00000003708	ssb	99	56.771	ENSCCAG00000035147	SSB	86	66.087	Cebus_capucinus
ENSPREG00000003708	ssb	98	42.667	ENSCATG00000042909	-	90	42.133	Cercocebus_atys
ENSPREG00000003708	ssb	70	53.160	ENSCATG00000036701	SSB	77	52.788	Cercocebus_atys
ENSPREG00000003708	ssb	99	57.552	ENSCLAG00000015617	-	94	57.292	Chinchilla_lanigera
ENSPREG00000003708	ssb	99	57.031	ENSCSAG00000015200	SSB	83	56.771	Chlorocebus_sabaeus
ENSPREG00000003708	ssb	99	52.344	ENSCSAG00000018390	-	96	52.083	Chlorocebus_sabaeus
ENSPREG00000003708	ssb	99	57.031	ENSCHOG00000007763	SSB	94	56.771	Choloepus_hoffmanni
ENSPREG00000003708	ssb	96	61.141	ENSCPBG00000006519	SSB	91	60.789	Chrysemys_picta_bellii
ENSPREG00000003708	ssb	99	49.740	ENSCANG00000033240	-	93	48.438	Colobus_angolensis_palliatus
ENSPREG00000003708	ssb	99	57.031	ENSCANG00000027695	SSB	94	56.771	Colobus_angolensis_palliatus
ENSPREG00000003708	ssb	98	44.947	ENSCANG00000028838	-	88	44.681	Colobus_angolensis_palliatus
ENSPREG00000003708	ssb	96	53.639	ENSCGRG00001024831	Ssb	91	53.867	Cricetulus_griseus_chok1gshd
ENSPREG00000003708	ssb	96	53.639	ENSCGRG00000005387	Ssb	91	53.867	Cricetulus_griseus_crigri
ENSPREG00000003708	ssb	95	82.967	ENSCSEG00000011599	ssb	91	82.967	Cynoglossus_semilaevis
ENSPREG00000003708	ssb	97	86.863	ENSCVAG00000021558	ssb	93	90.885	Cyprinodon_variegatus
ENSPREG00000003708	ssb	99	65.789	ENSDARG00000029252	ssb	93	65.067	Danio_rerio
ENSPREG00000003708	ssb	99	57.292	ENSDNOG00000013450	SSB	94	57.031	Dasypus_novemcinctus
ENSPREG00000003708	ssb	97	53.316	ENSDORG00000005543	Ssb	92	53.316	Dipodomys_ordii
ENSPREG00000003708	ssb	88	34.463	FBgn0011638	La	83	33.524	Drosophila_melanogaster
ENSPREG00000003708	ssb	53	61.881	ENSETEG00000004614	-	52	61.881	Echinops_telfairi
ENSPREG00000003708	ssb	97	46.277	ENSEBUG00000001237	ssb	94	45.822	Eptatretus_burgeri
ENSPREG00000003708	ssb	98	58.201	ENSEASG00005022835	SSB	92	57.937	Equus_asinus_asinus
ENSPREG00000003708	ssb	98	58.201	ENSECAG00000018495	SSB	92	57.937	Equus_caballus
ENSPREG00000003708	ssb	80	46.753	ENSEEUG00000008077	SSB	78	46.753	Erinaceus_europaeus
ENSPREG00000003708	ssb	98	70.400	ENSELUG00000020929	ssb	93	67.914	Esox_lucius
ENSPREG00000003708	ssb	99	58.333	ENSFCAG00000011601	SSB	94	58.073	Felis_catus
ENSPREG00000003708	ssb	98	57.520	ENSFALG00000000930	SSB	91	57.784	Ficedula_albicollis
ENSPREG00000003708	ssb	99	57.552	ENSFDAG00000000598	SSB	94	57.292	Fukomys_damarensis
ENSPREG00000003708	ssb	78	84.437	ENSFHEG00000003268	ssb	97	84.444	Fundulus_heteroclitus
ENSPREG00000003708	ssb	96	72.118	ENSGMOG00000002664	ssb	93	71.505	Gadus_morhua
ENSPREG00000003708	ssb	98	58.621	ENSGALG00000009677	SSB	91	57.294	Gallus_gallus
ENSPREG00000003708	ssb	99	96.842	ENSGAFG00000002749	ssb	94	96.842	Gambusia_affinis
ENSPREG00000003708	ssb	97	77.394	ENSGACG00000005107	ssb	93	77.394	Gasterosteus_aculeatus
ENSPREG00000003708	ssb	96	60.598	ENSGAGG00000007807	SSB	91	60.263	Gopherus_agassizii
ENSPREG00000003708	ssb	99	48.438	ENSGGOG00000024891	-	93	47.917	Gorilla_gorilla
ENSPREG00000003708	ssb	50	55.959	ENSGGOG00000023471	-	78	55.440	Gorilla_gorilla
ENSPREG00000003708	ssb	97	76.694	ENSHBUG00000006584	ssb	92	76.694	Haplochromis_burtoni
ENSPREG00000003708	ssb	99	52.083	ENSHGLG00000005832	-	97	51.042	Heterocephalus_glaber_female
ENSPREG00000003708	ssb	99	57.179	ENSHGLG00000017580	-	94	56.812	Heterocephalus_glaber_female
ENSPREG00000003708	ssb	99	51.295	ENSHGLG00000004478	-	94	51.036	Heterocephalus_glaber_female
ENSPREG00000003708	ssb	100	51.429	ENSHGLG00100008767	-	95	51.169	Heterocephalus_glaber_male
ENSPREG00000003708	ssb	99	57.179	ENSHGLG00100003084	-	94	56.812	Heterocephalus_glaber_male
ENSPREG00000003708	ssb	95	75.758	ENSHCOG00000019011	ssb	92	75.410	Hippocampus_comes
ENSPREG00000003708	ssb	99	65.172	ENSIPUG00000003681	SSB	92	63.588	Ictalurus_punctatus
ENSPREG00000003708	ssb	99	57.031	ENSSTOG00000008416	SSB	94	56.250	Ictidomys_tridecemlineatus
ENSPREG00000003708	ssb	97	51.538	ENSJJAG00000023158	-	95	50.503	Jaculus_jaculus
ENSPREG00000003708	ssb	88	45.401	ENSJJAG00000016250	-	88	45.401	Jaculus_jaculus
ENSPREG00000003708	ssb	98	84.182	ENSKMAG00000017317	ssb	93	84.409	Kryptolebias_marmoratus
ENSPREG00000003708	ssb	97	83.019	ENSLBEG00000017345	ssb	94	83.019	Labrus_bergylta
ENSPREG00000003708	ssb	96	56.522	ENSLACG00000014056	SSB	92	56.201	Latimeria_chalumnae
ENSPREG00000003708	ssb	97	67.568	ENSLOCG00000007933	ssb	90	67.568	Lepisosteus_oculatus
ENSPREG00000003708	ssb	99	54.020	ENSLAFG00000000867	-	94	53.266	Loxodonta_africana
ENSPREG00000003708	ssb	77	42.373	ENSLAFG00000026721	-	97	42.373	Loxodonta_africana
ENSPREG00000003708	ssb	99	49.086	ENSLAFG00000028909	-	93	48.303	Loxodonta_africana
ENSPREG00000003708	ssb	99	57.031	ENSMFAG00000039066	SSB	85	66.087	Macaca_fascicularis
ENSPREG00000003708	ssb	94	48.199	ENSMFAG00000041478	-	91	50.760	Macaca_fascicularis
ENSPREG00000003708	ssb	99	57.031	ENSMMUG00000023051	SSB	85	66.087	Macaca_mulatta
ENSPREG00000003708	ssb	98	42.133	ENSMMUG00000039889	-	90	41.867	Macaca_mulatta
ENSPREG00000003708	ssb	99	48.571	ENSMMUG00000011724	-	78	51.368	Macaca_mulatta
ENSPREG00000003708	ssb	94	48.199	ENSMNEG00000034698	-	91	50.760	Macaca_nemestrina
ENSPREG00000003708	ssb	96	49.593	ENSMNEG00000028321	SSB	85	66.087	Macaca_nemestrina
ENSPREG00000003708	ssb	99	57.031	ENSMLEG00000035717	SSB	88	66.087	Mandrillus_leucophaeus
ENSPREG00000003708	ssb	97	39.733	ENSMLEG00000042644	-	79	41.337	Mandrillus_leucophaeus
ENSPREG00000003708	ssb	98	84.718	ENSMAMG00000004800	ssb	93	84.946	Mastacembelus_armatus
ENSPREG00000003708	ssb	97	76.694	ENSMZEG00005005749	ssb	99	73.228	Maylandia_zebra
ENSPREG00000003708	ssb	96	58.967	ENSMGAG00000010328	SSB	95	61.929	Meleagris_gallopavo
ENSPREG00000003708	ssb	99	57.292	ENSMICG00000028252	-	94	57.031	Microcebus_murinus
ENSPREG00000003708	ssb	96	54.076	ENSMICG00000033304	-	93	52.717	Microcebus_murinus
ENSPREG00000003708	ssb	97	38.874	ENSMODG00000007027	-	90	38.874	Monodelphis_domestica
ENSPREG00000003708	ssb	97	56.693	ENSMODG00000008227	-	92	56.693	Monodelphis_domestica
ENSPREG00000003708	ssb	96	77.384	ENSMALG00000008045	ssb	90	79.733	Monopterus_albus
ENSPREG00000003708	ssb	94	54.111	MGP_CAROLIEiJ_G0023629	-	97	61.290	Mus_caroli
ENSPREG00000003708	ssb	94	54.111	ENSMUSG00000068882	Ssb	97	61.290	Mus_musculus
ENSPREG00000003708	ssb	94	53.846	MGP_PahariEiJ_G0025081	-	97	60.645	Mus_pahari
ENSPREG00000003708	ssb	94	54.111	MGP_SPRETEiJ_G0024551	Ssb	97	61.290	Mus_spretus
ENSPREG00000003708	ssb	99	58.073	ENSMPUG00000000785	SSB	94	57.812	Mustela_putorius_furo
ENSPREG00000003708	ssb	98	56.154	ENSMLUG00000016316	SSB	93	55.897	Myotis_lucifugus
ENSPREG00000003708	ssb	97	76.694	ENSNBRG00000012661	ssb	99	73.333	Neolamprologus_brichardi
ENSPREG00000003708	ssb	99	56.771	ENSNLEG00000004958	SSB	86	66.087	Nomascus_leucogenys
ENSPREG00000003708	ssb	95	42.740	ENSNLEG00000028754	-	78	44.880	Nomascus_leucogenys
ENSPREG00000003708	ssb	65	61.200	ENSMEUG00000001650	-	100	61.200	Notamacropus_eugenii
ENSPREG00000003708	ssb	89	57.602	ENSODEG00000004202	-	92	57.310	Octodon_degus
ENSPREG00000003708	ssb	97	77.838	ENSONIG00000008776	ssb	92	77.838	Oreochromis_niloticus
ENSPREG00000003708	ssb	97	57.105	ENSOANG00000008543	SSB	91	57.105	Ornithorhynchus_anatinus
ENSPREG00000003708	ssb	99	56.250	ENSOCUG00000010396	SSB	94	55.990	Oryctolagus_cuniculus
ENSPREG00000003708	ssb	98	81.600	ENSORLG00000017208	ssb	93	81.989	Oryzias_latipes
ENSPREG00000003708	ssb	96	82.834	ENSORLG00020022574	ssb	93	81.818	Oryzias_latipes_hni
ENSPREG00000003708	ssb	97	82.527	ENSORLG00015016592	ssb	93	82.527	Oryzias_latipes_hsok
ENSPREG00000003708	ssb	96	83.651	ENSOMEG00000003193	ssb	93	83.155	Oryzias_melastigma
ENSPREG00000003708	ssb	99	54.135	ENSOGAG00000029768	SSB	94	53.885	Otolemur_garnettii
ENSPREG00000003708	ssb	99	57.812	ENSOARG00000002906	SSB	94	57.552	Ovis_aries
ENSPREG00000003708	ssb	99	56.955	ENSPPAG00000042673	SSB	86	66.087	Pan_paniscus
ENSPREG00000003708	ssb	89	48.529	ENSPPAG00000006189	-	85	45.588	Pan_paniscus
ENSPREG00000003708	ssb	99	48.177	ENSPPAG00000032427	-	100	56.589	Pan_paniscus
ENSPREG00000003708	ssb	99	58.333	ENSPPRG00000006599	SSB	94	58.073	Panthera_pardus
ENSPREG00000003708	ssb	99	58.333	ENSPTIG00000011021	SSB	91	58.073	Panthera_tigris_altaica
ENSPREG00000003708	ssb	99	56.955	ENSPTRG00000012620	SSB	86	66.087	Pan_troglodytes
ENSPREG00000003708	ssb	99	45.833	ENSPTRG00000042880	-	93	45.312	Pan_troglodytes
ENSPREG00000003708	ssb	87	44.478	ENSPANG00000034126	-	76	45.201	Papio_anubis
ENSPREG00000003708	ssb	99	57.031	ENSPANG00000007440	SSB	85	66.087	Papio_anubis
ENSPREG00000003708	ssb	97	39.467	ENSPANG00000031877	-	90	38.802	Papio_anubis
ENSPREG00000003708	ssb	99	69.393	ENSPKIG00000019325	ssb	98	68.097	Paramormyrops_kingsleyae
ENSPREG00000003708	ssb	96	60.870	ENSPSIG00000002265	SSB	85	60.526	Pelodiscus_sinensis
ENSPREG00000003708	ssb	93	69.859	ENSPMGG00000020075	ssb	91	71.137	Periophthalmus_magnuspinnatus
ENSPREG00000003708	ssb	93	44.875	ENSPMAG00000002982	ssb	89	44.186	Petromyzon_marinus
ENSPREG00000003708	ssb	97	58.713	ENSPCIG00000028591	-	92	58.713	Phascolarctos_cinereus
ENSPREG00000003708	ssb	99	97.090	ENSPFOG00000009650	ssb	95	97.090	Poecilia_formosa
ENSPREG00000003708	ssb	99	97.619	ENSPLAG00000020498	ssb	95	97.619	Poecilia_latipinna
ENSPREG00000003708	ssb	99	97.090	ENSPMEG00000001051	ssb	95	97.090	Poecilia_mexicana
ENSPREG00000003708	ssb	99	56.771	ENSPPYG00000012919	SSB	94	56.510	Pongo_abelii
ENSPREG00000003708	ssb	95	55.801	ENSPCAG00000010276	SSB	93	55.801	Procavia_capensis
ENSPREG00000003708	ssb	99	50.781	ENSPCOG00000023189	-	93	50.521	Propithecus_coquereli
ENSPREG00000003708	ssb	99	55.469	ENSPCOG00000015741	-	92	64.655	Propithecus_coquereli
ENSPREG00000003708	ssb	93	58.427	ENSPVAG00000006615	SSB	99	58.146	Pteropus_vampyrus
ENSPREG00000003708	ssb	97	76.694	ENSPNYG00000006444	ssb	99	73.228	Pundamilia_nyererei
ENSPREG00000003708	ssb	96	64.754	ENSPNAG00000011708	ssb	91	63.102	Pygocentrus_nattereri
ENSPREG00000003708	ssb	99	52.020	ENSRNOG00000007998	Ssb	95	51.515	Rattus_norvegicus
ENSPREG00000003708	ssb	99	53.003	ENSRNOG00000011606	AABR07061825.1	95	53.003	Rattus_norvegicus
ENSPREG00000003708	ssb	86	52.744	ENSRBIG00000041608	-	88	49.851	Rhinopithecus_bieti
ENSPREG00000003708	ssb	98	40.957	ENSRBIG00000029918	-	90	40.426	Rhinopithecus_bieti
ENSPREG00000003708	ssb	93	48.883	ENSRBIG00000041232	-	88	52.857	Rhinopithecus_bieti
ENSPREG00000003708	ssb	99	49.227	ENSRBIG00000041972	SSB	88	66.087	Rhinopithecus_bieti
ENSPREG00000003708	ssb	98	46.277	ENSRROG00000007149	-	91	46.011	Rhinopithecus_roxellana
ENSPREG00000003708	ssb	99	57.031	ENSRROG00000040346	SSB	85	66.087	Rhinopithecus_roxellana
ENSPREG00000003708	ssb	96	49.180	ENSRROG00000031684	-	91	54.248	Rhinopithecus_roxellana
ENSPREG00000003708	ssb	86	55.183	ENSRROG00000034102	-	91	50.400	Rhinopithecus_roxellana
ENSPREG00000003708	ssb	99	57.031	ENSSBOG00000027204	SSB	86	66.087	Saimiri_boliviensis_boliviensis
ENSPREG00000003708	ssb	97	58.981	ENSSHAG00000018062	SSB	91	58.981	Sarcophilus_harrisii
ENSPREG00000003708	ssb	98	69.169	ENSSFOG00015000550	ssb	91	69.169	Scleropages_formosus
ENSPREG00000003708	ssb	97	82.796	ENSSMAG00000013885	ssb	99	83.333	Scophthalmus_maximus
ENSPREG00000003708	ssb	98	85.255	ENSSDUG00000020117	ssb	93	85.484	Seriola_dumerili
ENSPREG00000003708	ssb	98	80.697	ENSSLDG00000002525	ssb	93	80.108	Seriola_lalandi_dorsalis
ENSPREG00000003708	ssb	95	52.210	ENSSARG00000007747	SSB	93	52.210	Sorex_araneus
ENSPREG00000003708	ssb	97	60.000	ENSSPUG00000012112	SSB	91	60.000	Sphenodon_punctatus
ENSPREG00000003708	ssb	97	86.022	ENSSPAG00000005696	ssb	97	86.022	Stegastes_partitus
ENSPREG00000003708	ssb	96	55.285	ENSSSCG00000015938	SSB	91	53.659	Sus_scrofa
ENSPREG00000003708	ssb	98	57.256	ENSTGUG00000007942	SSB	91	57.520	Taeniopygia_guttata
ENSPREG00000003708	ssb	97	76.075	ENSTRUG00000017839	ssb	93	79.570	Takifugu_rubripes
ENSPREG00000003708	ssb	96	76.694	ENSTNIG00000000915	ssb	100	75.477	Tetraodon_nigroviridis
ENSPREG00000003708	ssb	79	66.087	ENSTBEG00000009056	SSB	74	66.087	Tupaia_belangeri
ENSPREG00000003708	ssb	97	58.933	ENSTTRG00000002152	SSB	91	57.867	Tursiops_truncatus
ENSPREG00000003708	ssb	99	57.853	ENSUAMG00000027833	SSB	99	57.592	Ursus_americanus
ENSPREG00000003708	ssb	99	57.552	ENSUMAG00000013907	SSB	94	57.292	Ursus_maritimus
ENSPREG00000003708	ssb	99	58.073	ENSVPAG00000007183	SSB	95	57.812	Vicugna_pacos
ENSPREG00000003708	ssb	99	57.552	ENSVVUG00000016573	SSB	73	57.292	Vulpes_vulpes
ENSPREG00000003708	ssb	98	55.438	ENSXETG00000025402	ssb	88	54.907	Xenopus_tropicalis
ENSPREG00000003708	ssb	100	91.623	ENSXCOG00000019109	ssb	100	91.623	Xiphophorus_couchianus
ENSPREG00000003708	ssb	99	93.947	ENSXMAG00000004888	ssb	94	94.695	Xiphophorus_maculatus