EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003713 (Gene tree)
Gene ID: 103471263
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 11213 bases
Position: chrLG10:25791561-25802773
Accession: 103471263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005351	Exo_endo_phos	PF03372.23	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005421	-	1653	XM_008420141	ENSPREP00000005351	550 (aa)	XP_008418363	-

Gene Model

Click here to download ENSPREG00000003713's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003713	cnot6b	100	73.968	ENSPREG00000003561	cnot6l	100	73.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003713	cnot6b	100	84.409	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSPREG00000003713	cnot6b	100	95.528	ENSAPOG00000009994	cnot6b	100	95.528	Acanthochromis_polyacanthus
ENSPREG00000003713	cnot6b	100	84.464	ENSAMEG00000000949	CNOT6	99	84.464	Ailuropoda_melanoleuca
ENSPREG00000003713	cnot6b	100	95.281	ENSACIG00000016566	cnot6b	100	95.281	Amphilophus_citrinellus
ENSPREG00000003713	cnot6b	100	95.528	ENSAOCG00000006893	cnot6b	100	95.528	Amphiprion_ocellaris
ENSPREG00000003713	cnot6b	100	95.528	ENSAPEG00000016949	cnot6b	100	95.528	Amphiprion_percula
ENSPREG00000003713	cnot6b	100	92.487	ENSATEG00000007862	cnot6b	100	92.487	Anabas_testudineus
ENSPREG00000003713	cnot6b	100	85.125	ENSAPLG00000012715	CNOT6	99	85.484	Anas_platyrhynchos
ENSPREG00000003713	cnot6b	100	85.663	ENSACAG00000016548	CNOT6	100	85.663	Anolis_carolinensis
ENSPREG00000003713	cnot6b	100	84.588	ENSANAG00000030436	CNOT6	96	84.588	Aotus_nancymaae
ENSPREG00000003713	cnot6b	100	93.560	ENSACLG00000008279	cnot6b	100	93.560	Astatotilapia_calliptera
ENSPREG00000003713	cnot6b	100	87.657	ENSAMXG00000034694	cnot6b	100	87.657	Astyanax_mexicanus
ENSPREG00000003713	cnot6b	100	88.530	ENSAMXG00000019140	cnot6a	100	88.530	Astyanax_mexicanus
ENSPREG00000003713	cnot6b	100	84.588	ENSBTAG00000017362	CNOT6	100	84.588	Bos_taurus
ENSPREG00000003713	cnot6b	100	84.229	ENSCJAG00000009795	CNOT6	100	84.229	Callithrix_jacchus
ENSPREG00000003713	cnot6b	100	84.767	ENSCAFG00000000464	CNOT6	100	84.767	Canis_familiaris
ENSPREG00000003713	cnot6b	100	84.767	ENSCAFG00020002441	CNOT6	100	84.767	Canis_lupus_dingo
ENSPREG00000003713	cnot6b	100	84.229	ENSCHIG00000019100	CNOT6	100	84.229	Capra_hircus
ENSPREG00000003713	cnot6b	100	84.050	ENSTSYG00000003982	CNOT6	100	84.050	Carlito_syrichta
ENSPREG00000003713	cnot6b	100	79.928	ENSCPOG00000035657	CNOT6	100	79.928	Cavia_porcellus
ENSPREG00000003713	cnot6b	100	79.928	ENSCCAG00000033670	CNOT6	100	79.928	Cebus_capucinus
ENSPREG00000003713	cnot6b	100	84.409	ENSCATG00000042014	CNOT6	100	84.409	Cercocebus_atys
ENSPREG00000003713	cnot6b	100	83.333	ENSCLAG00000010489	CNOT6	100	83.333	Chinchilla_lanigera
ENSPREG00000003713	cnot6b	100	84.409	ENSCSAG00000008165	CNOT6	100	84.409	Chlorocebus_sabaeus
ENSPREG00000003713	cnot6b	100	83.871	ENSCHOG00000009680	CNOT6	100	84.229	Choloepus_hoffmanni
ENSPREG00000003713	cnot6b	100	85.484	ENSCPBG00000008908	CNOT6	100	85.842	Chrysemys_picta_bellii
ENSPREG00000003713	cnot6b	100	84.588	ENSCANG00000026756	CNOT6	100	84.588	Colobus_angolensis_palliatus
ENSPREG00000003713	cnot6b	100	84.268	ENSCGRG00001011452	Cnot6	100	84.268	Cricetulus_griseus_chok1gshd
ENSPREG00000003713	cnot6b	100	81.004	ENSCGRG00000010407	Cnot6	100	81.004	Cricetulus_griseus_crigri
ENSPREG00000003713	cnot6b	100	94.275	ENSCSEG00000010939	cnot6b	100	94.275	Cynoglossus_semilaevis
ENSPREG00000003713	cnot6b	100	96.774	ENSCVAG00000010538	cnot6b	100	96.774	Cyprinodon_variegatus
ENSPREG00000003713	cnot6b	100	86.225	ENSDARG00000101072	cnot6b	100	86.225	Danio_rerio
ENSPREG00000003713	cnot6b	100	88.351	ENSDARG00000008255	cnot6a	100	88.351	Danio_rerio
ENSPREG00000003713	cnot6b	100	84.946	ENSDNOG00000041644	CNOT6	100	84.946	Dasypus_novemcinctus
ENSPREG00000003713	cnot6b	100	75.627	ENSDORG00000001708	Cnot6	100	75.627	Dipodomys_ordii
ENSPREG00000003713	cnot6b	100	68.036	ENSETEG00000006975	CNOT6	100	68.036	Echinops_telfairi
ENSPREG00000003713	cnot6b	90	80.645	ENSEASG00005012957	-	99	80.645	Equus_asinus_asinus
ENSPREG00000003713	cnot6b	100	84.588	ENSEASG00005012794	-	100	84.588	Equus_asinus_asinus
ENSPREG00000003713	cnot6b	100	85.125	ENSECAG00000019325	CNOT6	100	85.125	Equus_caballus
ENSPREG00000003713	cnot6b	100	81.013	ENSECAG00000012704	-	99	81.013	Equus_caballus
ENSPREG00000003713	cnot6b	100	84.588	ENSEEUG00000015382	CNOT6	100	84.588	Erinaceus_europaeus
ENSPREG00000003713	cnot6b	100	86.596	ENSELUG00000015981	cnot6b	99	86.596	Esox_lucius
ENSPREG00000003713	cnot6b	100	86.559	ENSELUG00000024580	cnot6a	100	86.559	Esox_lucius
ENSPREG00000003713	cnot6b	100	84.946	ENSFCAG00000001881	CNOT6	100	84.946	Felis_catus
ENSPREG00000003713	cnot6b	100	85.305	ENSFALG00000007699	CNOT6	100	85.663	Ficedula_albicollis
ENSPREG00000003713	cnot6b	100	83.333	ENSFDAG00000001999	CNOT6	100	83.333	Fukomys_damarensis
ENSPREG00000003713	cnot6b	69	97.492	ENSFHEG00000013756	cnot6b	99	97.492	Fundulus_heteroclitus
ENSPREG00000003713	cnot6b	95	91.493	ENSGMOG00000009767	cnot6b	99	91.493	Gadus_morhua
ENSPREG00000003713	cnot6b	100	85.125	ENSGALG00000034316	CNOT6	100	85.484	Gallus_gallus
ENSPREG00000003713	cnot6b	100	97.133	ENSGAFG00000008525	cnot6b	100	97.133	Gambusia_affinis
ENSPREG00000003713	cnot6b	95	90.926	ENSGACG00000018046	cnot6b	99	90.926	Gasterosteus_aculeatus
ENSPREG00000003713	cnot6b	100	70.789	ENSGAGG00000012176	CNOT6	100	71.147	Gopherus_agassizii
ENSPREG00000003713	cnot6b	100	84.409	ENSGGOG00000003675	CNOT6	100	84.409	Gorilla_gorilla
ENSPREG00000003713	cnot6b	100	93.739	ENSHBUG00000002819	cnot6b	100	93.739	Haplochromis_burtoni
ENSPREG00000003713	cnot6b	100	83.333	ENSHGLG00000017756	CNOT6	100	83.333	Heterocephalus_glaber_female
ENSPREG00000003713	cnot6b	100	83.333	ENSHGLG00100005747	CNOT6	100	83.333	Heterocephalus_glaber_male
ENSPREG00000003713	cnot6b	100	94.918	ENSHCOG00000016176	cnot6b	100	94.918	Hippocampus_comes
ENSPREG00000003713	cnot6b	100	88.351	ENSIPUG00000019831	cnot6a	100	88.351	Ictalurus_punctatus
ENSPREG00000003713	cnot6b	100	88.372	ENSIPUG00000017482	cnot6b	100	88.372	Ictalurus_punctatus
ENSPREG00000003713	cnot6b	100	84.588	ENSSTOG00000002803	CNOT6	100	84.588	Ictidomys_tridecemlineatus
ENSPREG00000003713	cnot6b	100	84.050	ENSJJAG00000012296	Cnot6	100	84.050	Jaculus_jaculus
ENSPREG00000003713	cnot6b	100	95.699	ENSKMAG00000004640	cnot6b	100	95.699	Kryptolebias_marmoratus
ENSPREG00000003713	cnot6b	100	93.023	ENSLBEG00000027917	cnot6b	100	93.023	Labrus_bergylta
ENSPREG00000003713	cnot6b	100	91.592	ENSLOCG00000010102	cnot6b	99	91.592	Lepisosteus_oculatus
ENSPREG00000003713	cnot6b	100	85.484	ENSLAFG00000016742	CNOT6	100	85.484	Loxodonta_africana
ENSPREG00000003713	cnot6b	100	84.409	ENSMFAG00000030867	CNOT6	100	84.409	Macaca_fascicularis
ENSPREG00000003713	cnot6b	100	84.409	ENSMMUG00000018690	CNOT6	100	84.409	Macaca_mulatta
ENSPREG00000003713	cnot6b	100	84.409	ENSMNEG00000038565	CNOT6	100	84.409	Macaca_nemestrina
ENSPREG00000003713	cnot6b	100	84.409	ENSMLEG00000010555	CNOT6	100	84.409	Mandrillus_leucophaeus
ENSPREG00000003713	cnot6b	100	95.349	ENSMAMG00000007515	cnot6b	100	95.349	Mastacembelus_armatus
ENSPREG00000003713	cnot6b	100	93.560	ENSMZEG00005012899	cnot6b	100	93.560	Maylandia_zebra
ENSPREG00000003713	cnot6b	100	83.692	ENSMAUG00000019798	Cnot6	100	83.692	Mesocricetus_auratus
ENSPREG00000003713	cnot6b	98	76.994	ENSMICG00000028378	-	99	76.994	Microcebus_murinus
ENSPREG00000003713	cnot6b	100	82.796	ENSMICG00000013018	-	100	82.796	Microcebus_murinus
ENSPREG00000003713	cnot6b	100	83.692	ENSMOCG00000021662	Cnot6	100	83.692	Microtus_ochrogaster
ENSPREG00000003713	cnot6b	100	93.466	ENSMMOG00000003227	cnot6b	100	93.466	Mola_mola
ENSPREG00000003713	cnot6b	100	84.946	ENSMODG00000003979	CNOT6	100	85.305	Monodelphis_domestica
ENSPREG00000003713	cnot6b	100	94.991	ENSMALG00000014251	cnot6b	100	94.991	Monopterus_albus
ENSPREG00000003713	cnot6b	100	84.448	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.448	Mus_caroli
ENSPREG00000003713	cnot6b	100	84.448	ENSMUSG00000020362	Cnot6	100	84.448	Mus_musculus
ENSPREG00000003713	cnot6b	100	84.448	MGP_PahariEiJ_G0017413	Cnot6	100	84.448	Mus_pahari
ENSPREG00000003713	cnot6b	100	84.448	MGP_SPRETEiJ_G0017122	Cnot6	100	84.448	Mus_spretus
ENSPREG00000003713	cnot6b	100	85.125	ENSMPUG00000000587	CNOT6	96	85.125	Mustela_putorius_furo
ENSPREG00000003713	cnot6b	100	83.304	ENSMLUG00000010257	CNOT6	100	83.304	Myotis_lucifugus
ENSPREG00000003713	cnot6b	100	82.975	ENSNGAG00000008269	Cnot6	100	83.333	Nannospalax_galili
ENSPREG00000003713	cnot6b	100	93.739	ENSNBRG00000010798	cnot6b	100	93.739	Neolamprologus_brichardi
ENSPREG00000003713	cnot6b	100	84.629	ENSNLEG00000002322	CNOT6	100	84.629	Nomascus_leucogenys
ENSPREG00000003713	cnot6b	81	81.395	ENSMEUG00000000025	CNOT6	81	82.326	Notamacropus_eugenii
ENSPREG00000003713	cnot6b	88	84.726	ENSOPRG00000008244	-	88	84.726	Ochotona_princeps
ENSPREG00000003713	cnot6b	100	82.437	ENSODEG00000007041	CNOT6	100	82.437	Octodon_degus
ENSPREG00000003713	cnot6b	75	92.908	ENSONIG00000013027	cnot6b	99	92.908	Oreochromis_niloticus
ENSPREG00000003713	cnot6b	100	85.125	ENSOANG00000010226	CNOT6	100	85.125	Ornithorhynchus_anatinus
ENSPREG00000003713	cnot6b	100	83.750	ENSOCUG00000011083	CNOT6	100	83.750	Oryctolagus_cuniculus
ENSPREG00000003713	cnot6b	100	93.739	ENSORLG00000005059	cnot6b	100	93.739	Oryzias_latipes
ENSPREG00000003713	cnot6b	100	93.739	ENSORLG00020012784	cnot6b	100	93.739	Oryzias_latipes_hni
ENSPREG00000003713	cnot6b	93	93.117	ENSORLG00015022658	cnot6b	98	93.117	Oryzias_latipes_hsok
ENSPREG00000003713	cnot6b	100	94.275	ENSOMEG00000005295	cnot6b	100	94.275	Oryzias_melastigma
ENSPREG00000003713	cnot6b	94	83.429	ENSOGAG00000032470	CNOT6	100	83.429	Otolemur_garnettii
ENSPREG00000003713	cnot6b	97	83.610	ENSOARG00000001003	CNOT6	100	83.610	Ovis_aries
ENSPREG00000003713	cnot6b	100	84.409	ENSPPAG00000032253	CNOT6	100	84.409	Pan_paniscus
ENSPREG00000003713	cnot6b	100	84.767	ENSPPRG00000011912	CNOT6	100	84.767	Panthera_pardus
ENSPREG00000003713	cnot6b	100	84.767	ENSPTIG00000016794	CNOT6	100	84.767	Panthera_tigris_altaica
ENSPREG00000003713	cnot6b	100	84.991	ENSPTRG00000017636	CNOT6	100	84.991	Pan_troglodytes
ENSPREG00000003713	cnot6b	100	84.409	ENSPANG00000016191	CNOT6	100	84.409	Papio_anubis
ENSPREG00000003713	cnot6b	100	89.624	ENSPKIG00000021368	cnot6b	100	89.624	Paramormyrops_kingsleyae
ENSPREG00000003713	cnot6b	98	85.138	ENSPSIG00000017307	CNOT6	100	85.505	Pelodiscus_sinensis
ENSPREG00000003713	cnot6b	100	95.463	ENSPMGG00000011238	cnot6b	100	95.463	Periophthalmus_magnuspinnatus
ENSPREG00000003713	cnot6b	100	82.796	ENSPEMG00000000627	Cnot6	100	83.154	Peromyscus_maniculatus_bairdii
ENSPREG00000003713	cnot6b	100	85.125	ENSPCIG00000020319	CNOT6	99	85.484	Phascolarctos_cinereus
ENSPREG00000003713	cnot6b	100	97.666	ENSPFOG00000006291	cnot6b	100	97.491	Poecilia_formosa
ENSPREG00000003713	cnot6b	100	95.455	ENSPLAG00000008266	cnot6b	100	95.455	Poecilia_latipinna
ENSPREG00000003713	cnot6b	100	97.670	ENSPMEG00000009091	cnot6b	100	97.670	Poecilia_mexicana
ENSPREG00000003713	cnot6b	100	84.409	ENSPPYG00000016137	CNOT6	100	84.409	Pongo_abelii
ENSPREG00000003713	cnot6b	72	83.895	ENSPCAG00000005599	-	71	83.895	Procavia_capensis
ENSPREG00000003713	cnot6b	100	78.853	ENSPCOG00000017359	CNOT6	100	79.570	Propithecus_coquereli
ENSPREG00000003713	cnot6b	100	81.541	ENSPVAG00000003069	CNOT6	100	81.541	Pteropus_vampyrus
ENSPREG00000003713	cnot6b	100	93.381	ENSPNYG00000000321	cnot6b	100	93.381	Pundamilia_nyererei
ENSPREG00000003713	cnot6b	100	88.014	ENSPNAG00000028816	cnot6b	100	88.014	Pygocentrus_nattereri
ENSPREG00000003713	cnot6b	100	88.889	ENSPNAG00000029586	cnot6a	100	88.889	Pygocentrus_nattereri
ENSPREG00000003713	cnot6b	100	82.975	ENSRNOG00000054891	Cnot6	100	82.975	Rattus_norvegicus
ENSPREG00000003713	cnot6b	100	84.229	ENSRBIG00000004309	CNOT6	100	84.229	Rhinopithecus_bieti
ENSPREG00000003713	cnot6b	100	84.229	ENSRROG00000035378	CNOT6	100	84.229	Rhinopithecus_roxellana
ENSPREG00000003713	cnot6b	100	84.588	ENSSBOG00000030494	CNOT6	100	84.588	Saimiri_boliviensis_boliviensis
ENSPREG00000003713	cnot6b	100	84.946	ENSSHAG00000017436	CNOT6	100	85.305	Sarcophilus_harrisii
ENSPREG00000003713	cnot6b	100	89.445	ENSSFOG00015022383	cnot6a	96	89.445	Scleropages_formosus
ENSPREG00000003713	cnot6b	100	90.519	ENSSFOG00015015133	CNOT6	100	90.877	Scleropages_formosus
ENSPREG00000003713	cnot6b	100	93.202	ENSSMAG00000003084	cnot6b	100	93.202	Scophthalmus_maximus
ENSPREG00000003713	cnot6b	100	95.170	ENSSDUG00000004151	cnot6b	100	95.170	Seriola_dumerili
ENSPREG00000003713	cnot6b	100	94.991	ENSSLDG00000004448	cnot6b	100	94.991	Seriola_lalandi_dorsalis
ENSPREG00000003713	cnot6b	64	65.922	ENSSARG00000012650	-	100	65.922	Sorex_araneus
ENSPREG00000003713	cnot6b	100	85.663	ENSSPUG00000007893	CNOT6	100	86.022	Sphenodon_punctatus
ENSPREG00000003713	cnot6b	100	95.707	ENSSPAG00000000149	cnot6b	100	95.707	Stegastes_partitus
ENSPREG00000003713	cnot6b	100	84.991	ENSSSCG00000014009	CNOT6	100	84.991	Sus_scrofa
ENSPREG00000003713	cnot6b	100	84.946	ENSTGUG00000001119	CNOT6	100	85.305	Taeniopygia_guttata
ENSPREG00000003713	cnot6b	100	91.756	ENSTRUG00000002818	cnot6b	100	91.756	Takifugu_rubripes
ENSPREG00000003713	cnot6b	100	92.832	ENSTNIG00000004443	cnot6b	99	92.832	Tetraodon_nigroviridis
ENSPREG00000003713	cnot6b	78	88.281	ENSTBEG00000017094	-	88	88.281	Tupaia_belangeri
ENSPREG00000003713	cnot6b	100	84.588	ENSTTRG00000009363	CNOT6	100	84.588	Tursiops_truncatus
ENSPREG00000003713	cnot6b	90	73.757	ENSUAMG00000004579	CNOT6	99	73.757	Ursus_americanus
ENSPREG00000003713	cnot6b	100	80.855	ENSUMAG00000024577	CNOT6	100	80.855	Ursus_maritimus
ENSPREG00000003713	cnot6b	83	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSPREG00000003713	cnot6b	100	84.767	ENSVVUG00000026940	CNOT6	100	84.767	Vulpes_vulpes
ENSPREG00000003713	cnot6b	100	95.818	ENSXCOG00000003360	cnot6b	100	95.818	Xiphophorus_couchianus
ENSPREG00000003713	cnot6b	100	97.670	ENSXMAG00000008730	cnot6b	100	97.670	Xiphophorus_maculatus