EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003755 (Gene tree)
Gene ID: 103482181
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase III subunit RPC4-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5564 bases
Position: chrLG19:27961751-27967314
Accession: 103482181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005370	RNA_pol_Rpc4	PF05132.14	5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005441	-	1164	XM_008438176	ENSPREP00000005370	387 (aa)	XP_008436398	UPI0004A48C4E

Gene Model

Click here to download ENSPREG00000003755's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03020	RNA polymerase	KEGG
pret04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003755	-	88	38.440	ENSPREG00000007593	polr3d	90	39.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003755	-	97	37.349	ENSG00000168495	POLR3D	92	47.967	Homo_sapiens
ENSPREG00000003755	-	89	37.772	ENSAPOG00000012197	polr3d	91	38.315	Acanthochromis_polyacanthus
ENSPREG00000003755	-	92	56.873	ENSAPOG00000017634	zgc:171971	99	54.878	Acanthochromis_polyacanthus
ENSPREG00000003755	-	97	37.198	ENSAMEG00000003221	POLR3D	98	39.364	Ailuropoda_melanoleuca
ENSPREG00000003755	-	100	52.020	ENSACIG00000003707	zgc:171971	99	52.273	Amphilophus_citrinellus
ENSPREG00000003755	-	88	37.940	ENSACIG00000017832	polr3d	90	38.251	Amphilophus_citrinellus
ENSPREG00000003755	-	92	58.537	ENSAOCG00000007733	zgc:171971	99	55.990	Amphiprion_ocellaris
ENSPREG00000003755	-	89	37.709	ENSAOCG00000005037	polr3d	91	38.268	Amphiprion_ocellaris
ENSPREG00000003755	-	89	37.265	ENSAPEG00000013751	polr3d	91	37.802	Amphiprion_percula
ENSPREG00000003755	-	92	59.079	ENSAPEG00000016107	zgc:171971	99	56.479	Amphiprion_percula
ENSPREG00000003755	-	89	39.130	ENSATEG00000023119	polr3d	91	40.331	Anabas_testudineus
ENSPREG00000003755	-	99	55.388	ENSATEG00000023125	zgc:171971	99	55.639	Anabas_testudineus
ENSPREG00000003755	-	82	34.648	ENSAPLG00000014393	POLR3D	98	34.648	Anas_platyrhynchos
ENSPREG00000003755	-	79	35.522	ENSACAG00000010592	POLR3D	83	36.418	Anolis_carolinensis
ENSPREG00000003755	-	97	37.681	ENSANAG00000030023	POLR3D	98	38.235	Aotus_nancymaae
ENSPREG00000003755	-	88	38.919	ENSACLG00000010147	polr3d	90	38.649	Astatotilapia_calliptera
ENSPREG00000003755	-	100	60.101	ENSACLG00000000074	zgc:171971	99	61.364	Astatotilapia_calliptera
ENSPREG00000003755	-	88	37.766	ENSAMXG00000010079	polr3d	88	38.032	Astyanax_mexicanus
ENSPREG00000003755	-	90	46.857	ENSAMXG00000019418	zgc:171971	89	47.458	Astyanax_mexicanus
ENSPREG00000003755	-	97	39.951	ENSBTAG00000010036	POLR3D	98	39.951	Bos_taurus
ENSPREG00000003755	-	97	37.831	ENSCJAG00000020278	POLR3D	91	38.072	Callithrix_jacchus
ENSPREG00000003755	-	97	39.036	ENSCAFG00000009455	POLR3D	98	39.609	Canis_familiaris
ENSPREG00000003755	-	97	39.036	ENSCAFG00020013027	POLR3D	98	39.609	Canis_lupus_dingo
ENSPREG00000003755	-	97	39.216	ENSCHIG00000012279	POLR3D	98	39.461	Capra_hircus
ENSPREG00000003755	-	97	39.518	ENSTSYG00000009055	POLR3D	98	40.098	Carlito_syrichta
ENSPREG00000003755	-	82	38.202	ENSCAPG00000010394	POLR3D	97	38.202	Cavia_aperea
ENSPREG00000003755	-	88	39.788	ENSCPOG00000003679	POLR3D	89	39.892	Cavia_porcellus
ENSPREG00000003755	-	97	37.590	ENSCCAG00000019817	POLR3D	98	37.831	Cebus_capucinus
ENSPREG00000003755	-	97	37.745	ENSCATG00000025950	POLR3D	98	38.725	Cercocebus_atys
ENSPREG00000003755	-	88	39.523	ENSCLAG00000014993	POLR3D	89	39.788	Chinchilla_lanigera
ENSPREG00000003755	-	97	37.500	ENSCSAG00000016525	POLR3D	98	38.480	Chlorocebus_sabaeus
ENSPREG00000003755	-	88	35.870	ENSCHOG00000000228	POLR3D	89	36.141	Choloepus_hoffmanni
ENSPREG00000003755	-	88	36.631	ENSCPBG00000001313	POLR3D	90	37.166	Chrysemys_picta_bellii
ENSPREG00000003755	-	88	30.337	ENSCING00000008141	-	89	31.180	Ciona_intestinalis
ENSPREG00000003755	-	97	32.908	ENSCSAVG00000007119	-	88	34.844	Ciona_savignyi
ENSPREG00000003755	-	97	39.312	ENSCANG00000043589	POLR3D	98	39.803	Colobus_angolensis_palliatus
ENSPREG00000003755	-	97	39.130	ENSCGRG00001010339	Polr3d	98	39.372	Cricetulus_griseus_chok1gshd
ENSPREG00000003755	-	97	39.130	ENSCGRG00000003956	Polr3d	98	39.372	Cricetulus_griseus_crigri
ENSPREG00000003755	-	99	52.941	ENSCSEG00000015509	zgc:171971	99	52.941	Cynoglossus_semilaevis
ENSPREG00000003755	-	89	36.740	ENSCSEG00000008123	polr3d	89	38.292	Cynoglossus_semilaevis
ENSPREG00000003755	-	88	40.503	ENSCVAG00000020687	polr3d	90	40.782	Cyprinodon_variegatus
ENSPREG00000003755	-	96	60.811	ENSCVAG00000009078	-	98	60.811	Cyprinodon_variegatus
ENSPREG00000003755	-	89	37.600	ENSDARG00000104516	polr3d	91	38.315	Danio_rerio
ENSPREG00000003755	-	88	46.721	ENSDARG00000042054	zgc:171971	87	46.721	Danio_rerio
ENSPREG00000003755	-	97	38.235	ENSDNOG00000013488	POLR3D	98	38.313	Dasypus_novemcinctus
ENSPREG00000003755	-	97	37.590	ENSDORG00000011174	Polr3d	89	39.683	Dipodomys_ordii
ENSPREG00000003755	-	88	38.108	ENSETEG00000016516	POLR3D	89	40.162	Echinops_telfairi
ENSPREG00000003755	-	70	35.806	ENSEBUG00000014414	polr3d	97	36.471	Eptatretus_burgeri
ENSPREG00000003755	-	97	38.554	ENSEASG00005018824	POLR3D	98	38.875	Equus_asinus_asinus
ENSPREG00000003755	-	97	39.518	ENSECAG00000025090	-	98	39.853	Equus_caballus
ENSPREG00000003755	-	97	37.349	ENSEEUG00000007632	POLR3D	98	37.590	Erinaceus_europaeus
ENSPREG00000003755	-	90	49.448	ENSELUG00000017642	zgc:171971	86	50.141	Esox_lucius
ENSPREG00000003755	-	88	35.849	ENSELUG00000016978	polr3d	90	36.461	Esox_lucius
ENSPREG00000003755	-	97	36.957	ENSFCAG00000005346	POLR3D	98	38.795	Felis_catus
ENSPREG00000003755	-	82	37.647	ENSFALG00000010907	POLR3D	99	37.647	Ficedula_albicollis
ENSPREG00000003755	-	88	39.523	ENSFDAG00000010144	POLR3D	89	39.892	Fukomys_damarensis
ENSPREG00000003755	-	99	78.497	ENSFHEG00000003803	-	99	78.497	Fundulus_heteroclitus
ENSPREG00000003755	-	88	39.335	ENSFHEG00000000508	polr3d	90	39.335	Fundulus_heteroclitus
ENSPREG00000003755	-	89	36.388	ENSGMOG00000006293	polr3d	96	36.538	Gadus_morhua
ENSPREG00000003755	-	99	45.361	ENSGMOG00000015819	zgc:171971	99	45.361	Gadus_morhua
ENSPREG00000003755	-	80	36.982	ENSGALG00000032501	-	65	36.982	Gallus_gallus
ENSPREG00000003755	-	100	93.798	ENSGAFG00000009259	zgc:171971	100	93.798	Gambusia_affinis
ENSPREG00000003755	-	88	40.056	ENSGAFG00000010268	polr3d	90	41.226	Gambusia_affinis
ENSPREG00000003755	-	91	53.476	ENSGACG00000015436	zgc:171971	100	52.826	Gasterosteus_aculeatus
ENSPREG00000003755	-	89	38.630	ENSGACG00000011126	polr3d	91	39.891	Gasterosteus_aculeatus
ENSPREG00000003755	-	88	36.096	ENSGAGG00000023229	POLR3D	90	36.631	Gopherus_agassizii
ENSPREG00000003755	-	97	37.349	ENSGGOG00000007302	POLR3D	98	38.072	Gorilla_gorilla
ENSPREG00000003755	-	100	57.179	ENSHBUG00000020493	zgc:171971	96	61.905	Haplochromis_burtoni
ENSPREG00000003755	-	88	38.919	ENSHBUG00000012288	polr3d	90	38.649	Haplochromis_burtoni
ENSPREG00000003755	-	97	39.259	ENSHGLG00000015415	POLR3D	98	39.506	Heterocephalus_glaber_female
ENSPREG00000003755	-	97	39.259	ENSHGLG00100014950	POLR3D	98	39.506	Heterocephalus_glaber_male
ENSPREG00000003755	-	98	48.072	ENSHCOG00000018819	-	98	48.329	Hippocampus_comes
ENSPREG00000003755	-	88	38.630	ENSHCOG00000002228	polr3d	90	39.178	Hippocampus_comes
ENSPREG00000003755	-	88	46.418	ENSIPUG00000008608	zgc:171971	87	46.439	Ictalurus_punctatus
ENSPREG00000003755	-	89	36.951	ENSIPUG00000003480	polr3d	93	37.403	Ictalurus_punctatus
ENSPREG00000003755	-	97	38.631	ENSSTOG00000016519	POLR3D	89	40.054	Ictidomys_tridecemlineatus
ENSPREG00000003755	-	97	39.903	ENSJJAG00000006743	Polr3d	98	40.146	Jaculus_jaculus
ENSPREG00000003755	-	89	38.504	ENSKMAG00000005145	polr3d	91	39.227	Kryptolebias_marmoratus
ENSPREG00000003755	-	89	38.187	ENSLBEG00000003430	polr3d	91	38.630	Labrus_bergylta
ENSPREG00000003755	-	99	54.135	ENSLBEG00000009545	zgc:171971	99	54.135	Labrus_bergylta
ENSPREG00000003755	-	88	38.770	ENSLACG00000016654	POLR3D	90	39.037	Latimeria_chalumnae
ENSPREG00000003755	-	89	37.366	ENSLOCG00000016080	polr3d	92	37.466	Lepisosteus_oculatus
ENSPREG00000003755	-	88	45.634	ENSLOCG00000006467	zgc:171971	99	42.899	Lepisosteus_oculatus
ENSPREG00000003755	-	97	39.277	ENSLAFG00000001562	POLR3D	98	39.518	Loxodonta_africana
ENSPREG00000003755	-	97	37.745	ENSMFAG00000029141	POLR3D	98	38.725	Macaca_fascicularis
ENSPREG00000003755	-	97	38.235	ENSMMUG00000023226	POLR3D	98	38.725	Macaca_mulatta
ENSPREG00000003755	-	97	37.745	ENSMNEG00000039410	POLR3D	98	38.725	Macaca_nemestrina
ENSPREG00000003755	-	97	37.745	ENSMLEG00000031413	POLR3D	98	38.725	Mandrillus_leucophaeus
ENSPREG00000003755	-	94	54.155	ENSMAMG00000020617	zgc:171971	99	52.882	Mastacembelus_armatus
ENSPREG00000003755	-	90	38.315	ENSMAMG00000008914	polr3d	91	38.798	Mastacembelus_armatus
ENSPREG00000003755	-	100	60.101	ENSMZEG00005003175	zgc:171971	99	61.364	Maylandia_zebra
ENSPREG00000003755	-	88	38.919	ENSMZEG00005011442	polr3d	90	38.649	Maylandia_zebra
ENSPREG00000003755	-	97	39.372	ENSMAUG00000006844	Polr3d	98	39.614	Mesocricetus_auratus
ENSPREG00000003755	-	98	40.431	ENSMICG00000001049	POLR3D	99	40.670	Microcebus_murinus
ENSPREG00000003755	-	97	37.046	ENSMOCG00000005195	Polr3d	98	39.130	Microtus_ochrogaster
ENSPREG00000003755	-	89	39.722	ENSMMOG00000013845	polr3d	90	39.722	Mola_mola
ENSPREG00000003755	-	86	37.534	ENSMODG00000009491	POLR3D	91	37.808	Monodelphis_domestica
ENSPREG00000003755	-	99	53.046	ENSMALG00000005659	zgc:171971	99	54.569	Monopterus_albus
ENSPREG00000003755	-	88	38.398	ENSMALG00000002928	polr3d	90	38.398	Monopterus_albus
ENSPREG00000003755	-	97	38.406	MGP_CAROLIEiJ_G0019481	Polr3d	98	38.647	Mus_caroli
ENSPREG00000003755	-	97	38.406	ENSMUSG00000000776	Polr3d	98	38.647	Mus_musculus
ENSPREG00000003755	-	97	37.198	MGP_PahariEiJ_G0030498	Polr3d	98	37.010	Mus_pahari
ENSPREG00000003755	-	97	38.647	MGP_SPRETEiJ_G0020373	Polr3d	98	38.889	Mus_spretus
ENSPREG00000003755	-	97	36.957	ENSMPUG00000003653	POLR3D	98	38.971	Mustela_putorius_furo
ENSPREG00000003755	-	88	40.212	ENSMLUG00000002109	POLR3D	89	40.476	Myotis_lucifugus
ENSPREG00000003755	-	88	38.992	ENSNGAG00000013872	Polr3d	98	37.462	Nannospalax_galili
ENSPREG00000003755	-	88	39.394	ENSNBRG00000019106	polr3d	90	39.118	Neolamprologus_brichardi
ENSPREG00000003755	-	89	50.000	ENSNBRG00000022951	zgc:171971	92	50.852	Neolamprologus_brichardi
ENSPREG00000003755	-	88	38.649	ENSMEUG00000000465	POLR3D	89	38.919	Notamacropus_eugenii
ENSPREG00000003755	-	88	39.788	ENSOPRG00000013146	POLR3D	89	40.053	Ochotona_princeps
ENSPREG00000003755	-	97	38.369	ENSODEG00000005884	POLR3D	90	40.000	Octodon_degus
ENSPREG00000003755	-	100	58.987	ENSONIG00000007280	zgc:171971	99	60.000	Oreochromis_niloticus
ENSPREG00000003755	-	98	38.406	ENSONIG00000010634	polr3d	90	39.189	Oreochromis_niloticus
ENSPREG00000003755	-	94	32.587	ENSOANG00000010776	POLR3D	90	36.828	Ornithorhynchus_anatinus
ENSPREG00000003755	-	88	38.196	ENSOCUG00000017410	POLR3D	89	39.516	Oryctolagus_cuniculus
ENSPREG00000003755	-	89	37.534	ENSORLG00000011583	polr3d	92	37.808	Oryzias_latipes
ENSPREG00000003755	-	89	38.420	ENSORLG00020005668	polr3d	90	38.692	Oryzias_latipes_hni
ENSPREG00000003755	-	89	37.330	ENSORLG00015020291	polr3d	90	37.330	Oryzias_latipes_hsok
ENSPREG00000003755	-	89	38.567	ENSOMEG00000010120	polr3d	90	38.504	Oryzias_melastigma
ENSPREG00000003755	-	88	39.628	ENSOGAG00000004912	POLR3D	89	39.894	Otolemur_garnettii
ENSPREG00000003755	-	97	39.216	ENSOARG00000010372	-	78	39.461	Ovis_aries
ENSPREG00000003755	-	97	37.349	ENSPPAG00000029591	POLR3D	98	38.072	Pan_paniscus
ENSPREG00000003755	-	97	36.957	ENSPPRG00000022827	POLR3D	98	38.795	Panthera_pardus
ENSPREG00000003755	-	97	36.957	ENSPTIG00000018239	POLR3D	98	38.795	Panthera_tigris_altaica
ENSPREG00000003755	-	97	37.349	ENSPTRG00000020056	POLR3D	98	38.072	Pan_troglodytes
ENSPREG00000003755	-	97	37.745	ENSPANG00000009440	POLR3D	98	38.725	Papio_anubis
ENSPREG00000003755	-	88	36.870	ENSPKIG00000006727	polr3d	90	37.135	Paramormyrops_kingsleyae
ENSPREG00000003755	-	89	48.901	ENSPKIG00000025283	zgc:171971	87	48.901	Paramormyrops_kingsleyae
ENSPREG00000003755	-	88	35.789	ENSPSIG00000006113	POLR3D	90	36.316	Pelodiscus_sinensis
ENSPREG00000003755	-	99	37.186	ENSPMGG00000021658	polr3d	91	38.095	Periophthalmus_magnuspinnatus
ENSPREG00000003755	-	97	38.235	ENSPEMG00000023314	Polr3d	89	39.892	Peromyscus_maniculatus_bairdii
ENSPREG00000003755	-	98	35.059	ENSPMAG00000001455	polr3d	90	37.306	Petromyzon_marinus
ENSPREG00000003755	-	88	39.730	ENSPCIG00000012699	POLR3D	89	40.000	Phascolarctos_cinereus
ENSPREG00000003755	-	100	95.607	ENSPFOG00000011089	zgc:171971	100	95.607	Poecilia_formosa
ENSPREG00000003755	-	88	39.678	ENSPFOG00000012698	polr3d	90	40.822	Poecilia_formosa
ENSPREG00000003755	-	99	79.016	ENSPLAG00000003645	zgc:171971	98	79.016	Poecilia_latipinna
ENSPREG00000003755	-	88	39.216	ENSPLAG00000008149	polr3d	90	40.548	Poecilia_latipinna
ENSPREG00000003755	-	88	39.106	ENSPMEG00000002702	polr3d	90	40.833	Poecilia_mexicana
ENSPREG00000003755	-	100	96.124	ENSPMEG00000016953	zgc:171971	100	96.124	Poecilia_mexicana
ENSPREG00000003755	-	97	37.590	ENSPPYG00000018419	POLR3D	98	38.313	Pongo_abelii
ENSPREG00000003755	-	88	37.088	ENSPCAG00000001971	POLR3D	89	37.912	Procavia_capensis
ENSPREG00000003755	-	97	40.338	ENSPCOG00000028134	POLR3D	98	40.580	Propithecus_coquereli
ENSPREG00000003755	-	97	37.441	ENSPVAG00000009873	POLR3D	98	37.143	Pteropus_vampyrus
ENSPREG00000003755	-	89	55.367	ENSPNYG00000008902	zgc:171971	89	56.780	Pundamilia_nyererei
ENSPREG00000003755	-	88	38.649	ENSPNYG00000016306	polr3d	90	38.378	Pundamilia_nyererei
ENSPREG00000003755	-	91	45.915	ENSPNAG00000018934	zgc:171971	89	45.217	Pygocentrus_nattereri
ENSPREG00000003755	-	89	37.105	ENSPNAG00000022324	polr3d	90	37.802	Pygocentrus_nattereri
ENSPREG00000003755	-	97	39.130	ENSRNOG00000010028	Polr3d	98	39.372	Rattus_norvegicus
ENSPREG00000003755	-	97	37.990	ENSRBIG00000035406	POLR3D	98	38.725	Rhinopithecus_bieti
ENSPREG00000003755	-	97	37.990	ENSRROG00000037278	POLR3D	98	38.725	Rhinopithecus_roxellana
ENSPREG00000003755	-	97	37.590	ENSSBOG00000024956	POLR3D	98	38.142	Saimiri_boliviensis_boliviensis
ENSPREG00000003755	-	82	36.207	ENSSHAG00000018257	POLR3D	99	36.494	Sarcophilus_harrisii
ENSPREG00000003755	-	97	35.181	ENSSFOG00015010611	polr3d	89	36.968	Scleropages_formosus
ENSPREG00000003755	-	83	46.341	ENSSFOG00015011547	zgc:171971	91	46.341	Scleropages_formosus
ENSPREG00000003755	-	98	38.060	ENSSMAG00000006271	polr3d	99	38.095	Scophthalmus_maximus
ENSPREG00000003755	-	99	54.637	ENSSMAG00000001465	zgc:171971	99	54.637	Scophthalmus_maximus
ENSPREG00000003755	-	99	58.250	ENSSDUG00000016019	zgc:171971	99	58.500	Seriola_dumerili
ENSPREG00000003755	-	87	37.135	ENSSDUG00000020718	polr3d	89	38.814	Seriola_dumerili
ENSPREG00000003755	-	87	37.401	ENSSLDG00000009643	polr3d	89	38.814	Seriola_lalandi_dorsalis
ENSPREG00000003755	-	99	58.500	ENSSLDG00000015968	zgc:171971	99	58.750	Seriola_lalandi_dorsalis
ENSPREG00000003755	-	88	37.666	ENSSARG00000012844	POLR3D	89	37.931	Sorex_araneus
ENSPREG00000003755	-	98	35.280	ENSSPUG00000000719	POLR3D	97	35.766	Sphenodon_punctatus
ENSPREG00000003755	-	100	51.128	ENSSPAG00000010384	zgc:171971	99	51.128	Stegastes_partitus
ENSPREG00000003755	-	89	38.525	ENSSPAG00000023326	polr3d	91	39.237	Stegastes_partitus
ENSPREG00000003755	-	97	39.467	ENSSSCG00000009622	POLR3D	89	40.053	Sus_scrofa
ENSPREG00000003755	-	89	37.127	ENSTRUG00000003555	polr3d	91	37.534	Takifugu_rubripes
ENSPREG00000003755	-	90	35.809	ENSTNIG00000006282	polr3d	91	36.885	Tetraodon_nigroviridis
ENSPREG00000003755	-	97	37.010	ENSTTRG00000012745	POLR3D	98	38.875	Tursiops_truncatus
ENSPREG00000003755	-	88	34.301	ENSUAMG00000026868	POLR3D	97	36.316	Ursus_americanus
ENSPREG00000003755	-	97	37.198	ENSUMAG00000005099	POLR3D	98	39.036	Ursus_maritimus
ENSPREG00000003755	-	97	39.036	ENSVVUG00000005290	POLR3D	98	39.609	Vulpes_vulpes
ENSPREG00000003755	-	88	36.267	ENSXETG00000010534	polr3d	91	36.267	Xenopus_tropicalis
ENSPREG00000003755	-	88	38.261	ENSXCOG00000015872	polr3d	89	39.193	Xiphophorus_couchianus
ENSPREG00000003755	-	100	93.282	ENSXMAG00000014555	-	100	93.282	Xiphophorus_maculatus
ENSPREG00000003755	-	88	39.496	ENSXMAG00000001872	polr3d	90	40.947	Xiphophorus_maculatus