EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000003816 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2888 bases
Position: chrKK215856.1:4044-6931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005468	zf-C2H2	PF00096.26	7.2e-19	1	3
ENSPREP00000005468	zf-C2H2	PF00096.26	7.2e-19	2	3
ENSPREP00000005468	zf-C2H2	PF00096.26	7.2e-19	3	3
ENSPREP00000005468	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005543	-	714	-	ENSPREP00000005468	210 (aa)	-	-

Gene Model

Click here to download ENSPREG00000003816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000003816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000003816	-	70	52.326	ENSPREG00000016204	-	64	55.696
ENSPREG00000003816	-	70	52.542	ENSPREG00000019161	-	91	50.820
ENSPREG00000003816	-	74	48.077	ENSPREG00000001101	znf319b	59	48.077
ENSPREG00000003816	-	66	52.577	ENSPREG00000009488	-	87	52.577
ENSPREG00000003816	-	81	58.228	ENSPREG00000015421	-	92	58.228
ENSPREG00000003816	-	50	55.696	ENSPREG00000002642	-	99	55.696
ENSPREG00000003816	-	73	50.000	ENSPREG00000012539	-	88	50.000
ENSPREG00000003816	-	87	56.962	ENSPREG00000003894	-	98	62.025
ENSPREG00000003816	-	84	59.494	ENSPREG00000001441	-	96	62.025
ENSPREG00000003816	-	73	50.000	ENSPREG00000014373	-	76	50.000
ENSPREG00000003816	-	83	66.667	ENSPREG00000004672	-	94	66.667
ENSPREG00000003816	-	93	48.148	ENSPREG00000016593	-	82	48.148
ENSPREG00000003816	-	73	48.101	ENSPREG00000000451	-	63	48.101
ENSPREG00000003816	-	70	52.727	ENSPREG00000013689	-	99	52.727
ENSPREG00000003816	-	99	52.308	ENSPREG00000007431	-	76	52.308
ENSPREG00000003816	-	78	62.025	ENSPREG00000015017	-	100	62.025
ENSPREG00000003816	-	58	33.333	ENSPREG00000021924	-	76	33.333
ENSPREG00000003816	-	86	57.692	ENSPREG00000013476	-	99	65.385
ENSPREG00000003816	-	66	55.769	ENSPREG00000008826	-	75	55.769
ENSPREG00000003816	-	72	66.667	ENSPREG00000013154	-	98	66.667
ENSPREG00000003816	-	84	83.146	ENSPREG00000004746	-	80	83.146
ENSPREG00000003816	-	90	58.228	ENSPREG00000014477	-	94	59.494
ENSPREG00000003816	-	99	53.165	ENSPREG00000015286	-	97	60.759
ENSPREG00000003816	-	100	41.667	ENSPREG00000020857	-	82	41.667
ENSPREG00000003816	-	100	60.759	ENSPREG00000014800	-	97	62.500
ENSPREG00000003816	-	82	58.904	ENSPREG00000002548	-	91	58.904
ENSPREG00000003816	-	83	65.823	ENSPREG00000011741	-	100	65.823
ENSPREG00000003816	-	51	59.259	ENSPREG00000004306	-	92	57.377
ENSPREG00000003816	-	82	59.494	ENSPREG00000011439	-	95	62.338
ENSPREG00000003816	-	72	47.368	ENSPREG00000013727	-	65	47.368
ENSPREG00000003816	-	69	52.727	ENSPREG00000013719	-	70	52.727
ENSPREG00000003816	-	77	53.165	ENSPREG00000014348	-	70	53.165
ENSPREG00000003816	-	82	57.692	ENSPREG00000009372	-	95	51.899
ENSPREG00000003816	-	73	56.962	ENSPREG00000004839	-	93	56.962
ENSPREG00000003816	-	90	55.714	ENSPREG00000005015	-	90	63.291
ENSPREG00000003816	-	81	45.570	ENSPREG00000003213	-	80	45.570
ENSPREG00000003816	-	82	63.291	ENSPREG00000015342	-	80	63.291
ENSPREG00000003816	-	86	60.000	ENSPREG00000002681	-	96	60.000
ENSPREG00000003816	-	100	46.835	ENSPREG00000004006	-	80	46.835
ENSPREG00000003816	-	69	63.291	ENSPREG00000004571	-	99	63.291
ENSPREG00000003816	-	84	30.000	ENSPREG00000021116	-	50	30.000
ENSPREG00000003816	-	74	57.143	ENSPREG00000009121	-	61	57.143
ENSPREG00000003816	-	100	70.588	ENSPREG00000009495	-	99	70.588
ENSPREG00000003816	-	83	59.494	ENSPREG00000005144	-	97	59.494
ENSPREG00000003816	-	82	69.620	ENSPREG00000013112	-	95	69.620
ENSPREG00000003816	-	76	55.128	ENSPREG00000002637	-	86	55.128
ENSPREG00000003816	-	79	56.962	ENSPREG00000004036	-	94	57.407
ENSPREG00000003816	-	93	59.740	ENSPREG00000002181	-	98	58.228
ENSPREG00000003816	-	73	56.410	ENSPREG00000014366	-	96	56.410
ENSPREG00000003816	-	78	54.430	ENSPREG00000002715	-	98	54.430
ENSPREG00000003816	-	80	58.228	ENSPREG00000002664	-	93	58.228
ENSPREG00000003816	-	86	69.620	ENSPREG00000003614	-	97	73.333
ENSPREG00000003816	-	71	53.846	ENSPREG00000014945	-	96	53.846
ENSPREG00000003816	-	85	53.846	ENSPREG00000016186	-	77	53.846
ENSPREG00000003816	-	82	65.385	ENSPREG00000012132	-	98	65.385
ENSPREG00000003816	-	69	55.696	ENSPREG00000014028	-	98	55.696
ENSPREG00000003816	-	70	49.383	ENSPREG00000019806	-	53	48.485
ENSPREG00000003816	-	92	52.564	ENSPREG00000013780	-	94	52.564
ENSPREG00000003816	-	73	56.962	ENSPREG00000000733	-	83	56.962
ENSPREG00000003816	-	99	57.692	ENSPREG00000002615	-	85	57.692
ENSPREG00000003816	-	69	85.484	ENSPREG00000004725	-	83	85.484
ENSPREG00000003816	-	66	55.696	ENSPREG00000001774	-	98	55.696
ENSPREG00000003816	-	69	54.430	ENSPREG00000018011	-	55	54.430
ENSPREG00000003816	-	84	48.101	ENSPREG00000002696	-	92	48.101
ENSPREG00000003816	-	99	49.367	ENSPREG00000006537	-	97	49.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000003816	-	69	53.165	ENSDARG00000102600	CABZ01003344.1	89	53.165	Danio_rerio
ENSPREG00000003816	-	69	59.322	ENSDARG00000100001	znf1096	70	59.322	Danio_rerio
ENSPREG00000003816	-	77	56.410	ENSDARG00000089715	si:cabz01054394.7	90	56.410	Danio_rerio
ENSPREG00000003816	-	69	53.165	ENSDARG00000091994	znf1048	65	53.165	Danio_rerio
ENSPREG00000003816	-	70	53.165	ENSDARG00000092938	znf1047	65	53.165	Danio_rerio
ENSPREG00000003816	-	62	60.759	ENSORLG00000024194	-	55	60.759	Oryzias_latipes
ENSPREG00000003816	-	79	52.000	ENSORLG00000012434	znf1064	77	52.000	Oryzias_latipes
ENSPREG00000003816	-	100	56.962	ENSPFOG00000023266	-	81	56.962	Poecilia_formosa
ENSPREG00000003816	-	99	56.410	ENSPFOG00000022423	-	92	56.410	Poecilia_formosa