EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000004039 (Gene tree)
Gene ID: 103471246
Gene Symbol: rack1
Alias: gnb2l1|rack1|wu:fb80d08|wu:fk65d12
Full Name: receptor for activated C kinase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3991 bases
Position: chrLG10:26331334-26335324
Accession: 103471246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005808	eIF2A	PF08662.11	3.7e-06	1	1
ENSPREP00000005822	eIF2A	PF08662.11	5.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005902	-	828	-	ENSPREP00000005822	275 (aa)	-	-
ENSPRET00000005889	-	1870	XM_008420109	ENSPREP00000005808	317 (aa)	XP_008418331	UPI000443A811

Gene Model

Click here to download ENSPREG00000004039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000004039	rack1	98	30.702	ENSPREG00000022222	wdr5	87	30.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004039	rack1	96	82.383	ENSTSYG00000033831	-	100	73.477	Carlito_syrichta
ENSPREG00000004039	rack1	100	98.738	ENSMAMG00000007841	rack1	100	98.738	Mastacembelus_armatus
ENSPREG00000004039	rack1	100	100.000	ENSPFOG00000008165	rack1	98	100.000	Poecilia_formosa
ENSPREG00000004039	rack1	100	100.000	ENSPMEG00000019993	rack1	100	100.000	Poecilia_mexicana
ENSPREG00000004039	rack1	100	95.584	ENSPNAG00000000469	rack1	100	95.584	Pygocentrus_nattereri
ENSPREG00000004039	rack1	100	97.476	ENSSMAG00000003589	rack1	100	97.476	Scophthalmus_maximus
ENSPREG00000004039	rack1	100	95.584	ENSTRUG00000000550	rack1	100	95.584	Takifugu_rubripes