EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000004099 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2762 bases
Position: chrLG18:4179140-4181901
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005884	zf-CCCH	PF00642.24	3.5e-29	1	3
ENSPREP00000005884	zf-CCCH	PF00642.24	3.5e-29	2	3
ENSPREP00000005884	zf-CCCH	PF00642.24	3.5e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000005965	-	909	-	ENSPREP00000005884	302 (aa)	-	-

Gene Model

Click here to download ENSPREG00000004099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004099	cth1	89	63.538	ENSAPOG00000012552	cth1	99	65.292	Acanthochromis_polyacanthus
ENSPREG00000004099	cth1	88	57.194	ENSACIG00000016026	cth1	99	56.426	Amphilophus_citrinellus
ENSPREG00000004099	cth1	99	63.226	ENSAOCG00000001644	cth1	99	64.217	Amphiprion_ocellaris
ENSPREG00000004099	cth1	99	63.226	ENSAPEG00000008930	cth1	99	64.217	Amphiprion_percula
ENSPREG00000004099	cth1	99	65.528	ENSATEG00000002281	cth1	97	65.217	Anabas_testudineus
ENSPREG00000004099	cth1	90	56.940	ENSACLG00000015353	cth1	100	56.997	Astatotilapia_calliptera
ENSPREG00000004099	cth1	93	54.575	ENSAMXG00000025717	cth1	97	55.921	Astyanax_mexicanus
ENSPREG00000004099	cth1	99	60.063	ENSCSEG00000014617	cth1	99	60.436	Cynoglossus_semilaevis
ENSPREG00000004099	cth1	97	69.024	ENSCVAG00000001680	cth1	63	69.435	Cyprinodon_variegatus
ENSPREG00000004099	cth1	90	50.519	ENSDARG00000057328	cth1	99	51.988	Danio_rerio
ENSPREG00000004099	cth1	95	51.543	ENSELUG00000012738	cth1	96	51.393	Esox_lucius
ENSPREG00000004099	cth1	100	70.288	ENSFHEG00000022665	cth1	99	71.565	Fundulus_heteroclitus
ENSPREG00000004099	cth1	99	57.413	ENSGMOG00000007360	cth1	99	57.098	Gadus_morhua
ENSPREG00000004099	cth1	100	83.810	ENSGAFG00000019288	cth1	99	83.810	Gambusia_affinis
ENSPREG00000004099	cth1	100	60.064	ENSGACG00000000802	cth1	99	60.064	Gasterosteus_aculeatus
ENSPREG00000004099	cth1	100	57.742	ENSHBUG00000014400	cth1	99	56.494	Haplochromis_burtoni
ENSPREG00000004099	cth1	99	50.667	ENSHCOG00000010276	cth1	99	50.000	Hippocampus_comes
ENSPREG00000004099	cth1	93	54.305	ENSIPUG00000018040	cth1	94	55.333	Ictalurus_punctatus
ENSPREG00000004099	cth1	100	61.613	ENSKMAG00000005944	cth1	99	62.581	Kryptolebias_marmoratus
ENSPREG00000004099	cth1	99	63.578	ENSLBEG00000019253	cth1	99	64.537	Labrus_bergylta
ENSPREG00000004099	cth1	68	50.485	ENSLOCG00000002047	cth1	97	50.990	Lepisosteus_oculatus
ENSPREG00000004099	cth1	99	48.370	ENSMAMG00000001525	cth1	99	46.612	Mastacembelus_armatus
ENSPREG00000004099	cth1	100	58.333	ENSMZEG00005022335	cth1	99	57.097	Maylandia_zebra
ENSPREG00000004099	cth1	94	63.487	ENSMMOG00000020518	cth1	100	64.474	Mola_mola
ENSPREG00000004099	cth1	99	51.491	ENSMALG00000020738	cth1	60	59.052	Monopterus_albus
ENSPREG00000004099	cth1	88	61.338	ENSNBRG00000022789	cth1	88	58.647	Neolamprologus_brichardi
ENSPREG00000004099	cth1	100	57.595	ENSONIG00000021318	cth1	99	54.545	Oreochromis_niloticus
ENSPREG00000004099	cth1	100	55.769	ENSORLG00000022847	cth1	99	57.692	Oryzias_latipes
ENSPREG00000004099	cth1	100	55.769	ENSORLG00020011979	cth1	99	57.372	Oryzias_latipes_hni
ENSPREG00000004099	cth1	100	56.410	ENSORLG00015013084	cth1	99	58.333	Oryzias_latipes_hsok
ENSPREG00000004099	cth1	94	57.439	ENSOMEG00000005809	cth1	81	59.247	Oryzias_melastigma
ENSPREG00000004099	cth1	92	50.321	ENSPKIG00000015883	cth1	96	51.118	Paramormyrops_kingsleyae
ENSPREG00000004099	cth1	99	59.878	ENSPMGG00000004275	cth1	100	60.185	Periophthalmus_magnuspinnatus
ENSPREG00000004099	cth1	100	93.377	ENSPFOG00000013583	cth1	93	93.377	Poecilia_formosa
ENSPREG00000004099	cth1	100	93.377	ENSPLAG00000018158	cth1	93	93.377	Poecilia_latipinna
ENSPREG00000004099	cth1	100	93.377	ENSPMEG00000005744	cth1	99	93.377	Poecilia_mexicana
ENSPREG00000004099	cth1	86	60.076	ENSPNYG00000016705	cth1	89	58.621	Pundamilia_nyererei
ENSPREG00000004099	cth1	96	52.351	ENSPNAG00000013147	cth1	92	54.576	Pygocentrus_nattereri
ENSPREG00000004099	cth1	86	57.455	ENSSFOG00015017190	cth1	87	55.596	Scleropages_formosus
ENSPREG00000004099	cth1	100	61.250	ENSSMAG00000007977	cth1	99	64.688	Scophthalmus_maximus
ENSPREG00000004099	cth1	100	64.220	ENSSDUG00000004321	cth1	99	64.832	Seriola_dumerili
ENSPREG00000004099	cth1	100	63.415	ENSSLDG00000004516	-	99	63.939	Seriola_lalandi_dorsalis
ENSPREG00000004099	cth1	100	63.415	ENSSLDG00000012760	cth1	99	63.939	Seriola_lalandi_dorsalis
ENSPREG00000004099	cth1	99	63.609	ENSSLDG00000010023	-	99	64.134	Seriola_lalandi_dorsalis
ENSPREG00000004099	cth1	100	63.057	ENSSPAG00000018659	cth1	99	66.561	Stegastes_partitus
ENSPREG00000004099	cth1	99	60.317	ENSTRUG00000012770	cth1	99	59.494	Takifugu_rubripes
ENSPREG00000004099	cth1	99	59.683	ENSTNIG00000000740	cth1	99	58.861	Tetraodon_nigroviridis
ENSPREG00000004099	cth1	82	77.016	ENSXCOG00000003710	cth1	88	76.707	Xiphophorus_couchianus
ENSPREG00000004099	cth1	100	86.262	ENSXMAG00000023885	cth1	99	86.262	Xiphophorus_maculatus