EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000004155 (Gene tree)
Gene ID: 103480110
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 17428 bases
Position: chrLG18:4192086-4209513
Accession: 103480110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005971	KH_1	PF00013.29	3.6e-06	1	1
ENSPREP00000005971	zf-CCHC	PF00098.23	0.00052	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000006052	-	4718	XM_008434928	ENSPREP00000005971	676 (aa)	XP_008433150	UPI0004A46106

Gene Model

Click here to download ENSPREG00000004155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004155	sf1	97	89.545	ENSAPOG00000012341	sf1	97	89.545	Acanthochromis_polyacanthus
ENSPREG00000004155	sf1	59	78.708	ENSAMEG00000017828	SF1	57	83.333	Ailuropoda_melanoleuca
ENSPREG00000004155	sf1	97	89.681	ENSAOCG00000010934	sf1	97	89.681	Amphiprion_ocellaris
ENSPREG00000004155	sf1	97	89.681	ENSAPEG00000009498	sf1	97	89.681	Amphiprion_percula
ENSPREG00000004155	sf1	67	88.596	ENSATEG00000001894	sf1	97	89.545	Anabas_testudineus
ENSPREG00000004155	sf1	59	78.708	ENSANAG00000026664	-	90	82.292	Aotus_nancymaae
ENSPREG00000004155	sf1	84	65.625	ENSANAG00000022607	-	88	74.263	Aotus_nancymaae
ENSPREG00000004155	sf1	68	83.624	ENSAMXG00000003630	sf1	86	84.475	Astyanax_mexicanus
ENSPREG00000004155	sf1	59	78.708	ENSBTAG00000001035	SF1	62	82.940	Bos_taurus
ENSPREG00000004155	sf1	59	78.708	ENSCJAG00000002780	SF1	75	69.380	Callithrix_jacchus
ENSPREG00000004155	sf1	59	78.708	ENSCAFG00000014239	SF1	58	82.940	Canis_familiaris
ENSPREG00000004155	sf1	59	78.708	ENSCAFG00020014381	SF1	58	82.940	Canis_lupus_dingo
ENSPREG00000004155	sf1	59	78.708	ENSCHIG00000025867	SF1	68	82.940	Capra_hircus
ENSPREG00000004155	sf1	59	77.644	ENSCAPG00000010762	SF1	66	83.289	Cavia_aperea
ENSPREG00000004155	sf1	59	77.698	ENSCPOG00000012290	SF1	69	83.289	Cavia_porcellus
ENSPREG00000004155	sf1	59	70.732	ENSCCAG00000023781	-	83	72.966	Cebus_capucinus
ENSPREG00000004155	sf1	59	78.708	ENSCCAG00000037881	SF1	90	82.292	Cebus_capucinus
ENSPREG00000004155	sf1	59	78.708	ENSCATG00000011564	SF1	90	82.292	Cercocebus_atys
ENSPREG00000004155	sf1	59	78.708	ENSCSAG00000007258	SF1	68	82.940	Chlorocebus_sabaeus
ENSPREG00000004155	sf1	56	73.434	ENSCHOG00000006008	SF1	66	77.716	Choloepus_hoffmanni
ENSPREG00000004155	sf1	60	56.057	ENSCING00000005564	-	83	55.896	Ciona_intestinalis
ENSPREG00000004155	sf1	51	57.951	ENSCSAVG00000009055	-	60	68.093	Ciona_savignyi
ENSPREG00000004155	sf1	59	78.708	ENSCANG00000042201	SF1	90	82.292	Colobus_angolensis_palliatus
ENSPREG00000004155	sf1	59	78.947	ENSCGRG00001003677	Sf1	65	83.465	Cricetulus_griseus_chok1gshd
ENSPREG00000004155	sf1	59	78.897	ENSCGRG00000001708	Sf1	68	83.820	Cricetulus_griseus_crigri
ENSPREG00000004155	sf1	97	87.595	ENSCSEG00000014375	sf1	94	87.860	Cynoglossus_semilaevis
ENSPREG00000004155	sf1	98	94.100	ENSCVAG00000001670	sf1	97	94.073	Cyprinodon_variegatus
ENSPREG00000004155	sf1	84	84.331	ENSDARG00000008188	sf1	97	85.129	Danio_rerio
ENSPREG00000004155	sf1	59	78.947	ENSDNOG00000001282	SF1	68	82.940	Dasypus_novemcinctus
ENSPREG00000004155	sf1	59	78.708	ENSDORG00000016334	Sf1	58	83.113	Dipodomys_ordii
ENSPREG00000004155	sf1	59	72.115	ENSETEG00000012830	SF1	51	75.603	Echinops_telfairi
ENSPREG00000004155	sf1	59	78.708	ENSEASG00005018272	SF1	68	82.940	Equus_asinus_asinus
ENSPREG00000004155	sf1	59	78.947	ENSECAG00000024544	SF1	68	83.202	Equus_caballus
ENSPREG00000004155	sf1	53	78.877	ENSEEUG00000001058	SF1	83	83.533	Erinaceus_europaeus
ENSPREG00000004155	sf1	78	77.180	ENSELUG00000013225	sf1	60	82.796	Esox_lucius
ENSPREG00000004155	sf1	59	78.708	ENSFCAG00000012231	SF1	75	69.020	Felis_catus
ENSPREG00000004155	sf1	59	78.657	ENSFDAG00000009833	SF1	66	83.289	Fukomys_damarensis
ENSPREG00000004155	sf1	97	91.641	ENSFHEG00000022656	sf1	97	89.666	Fundulus_heteroclitus
ENSPREG00000004155	sf1	71	78.542	ENSGMOG00000007469	sf1	60	93.009	Gadus_morhua
ENSPREG00000004155	sf1	91	98.049	ENSGAFG00000019284	sf1	100	98.049	Gambusia_affinis
ENSPREG00000004155	sf1	62	81.119	ENSGAGG00000021691	SF1	68	72.107	Gopherus_agassizii
ENSPREG00000004155	sf1	67	89.890	ENSHBUG00000011598	sf1	97	89.426	Haplochromis_burtoni
ENSPREG00000004155	sf1	59	78.708	ENSHGLG00000009541	SF1	65	82.940	Heterocephalus_glaber_female
ENSPREG00000004155	sf1	59	68.506	ENSHGLG00100008255	-	72	75.132	Heterocephalus_glaber_male
ENSPREG00000004155	sf1	59	78.657	ENSHGLG00100013879	-	66	83.289	Heterocephalus_glaber_male
ENSPREG00000004155	sf1	69	85.745	ENSHCOG00000011388	sf1	97	86.343	Hippocampus_comes
ENSPREG00000004155	sf1	63	69.476	ENSSTOG00000024353	-	67	72.846	Ictidomys_tridecemlineatus
ENSPREG00000004155	sf1	59	78.657	ENSSTOG00000009790	-	59	83.289	Ictidomys_tridecemlineatus
ENSPREG00000004155	sf1	59	78.947	ENSJJAG00000011788	Sf1	58	83.202	Jaculus_jaculus
ENSPREG00000004155	sf1	68	91.721	ENSKMAG00000005854	sf1	91	91.275	Kryptolebias_marmoratus
ENSPREG00000004155	sf1	83	88.387	ENSLBEG00000019836	sf1	72	88.696	Labrus_bergylta
ENSPREG00000004155	sf1	68	80.467	ENSLOCG00000002130	sf1	66	81.064	Lepisosteus_oculatus
ENSPREG00000004155	sf1	59	80.048	ENSLAFG00000007201	SF1	63	84.043	Loxodonta_africana
ENSPREG00000004155	sf1	59	78.708	ENSMFAG00000033122	SF1	90	82.292	Macaca_fascicularis
ENSPREG00000004155	sf1	59	78.708	ENSMMUG00000022606	SF1	90	83.333	Macaca_mulatta
ENSPREG00000004155	sf1	59	78.708	ENSMNEG00000037901	SF1	90	82.292	Macaca_nemestrina
ENSPREG00000004155	sf1	66	72.845	ENSMLEG00000040706	SF1	91	81.818	Mandrillus_leucophaeus
ENSPREG00000004155	sf1	67	90.351	ENSMAMG00000001780	sf1	97	90.303	Mastacembelus_armatus
ENSPREG00000004155	sf1	67	89.890	ENSMZEG00005009196	sf1	97	89.426	Maylandia_zebra
ENSPREG00000004155	sf1	59	78.947	ENSMAUG00000014064	Sf1	65	83.465	Mesocricetus_auratus
ENSPREG00000004155	sf1	59	78.708	ENSMICG00000001202	SF1	90	82.078	Microcebus_murinus
ENSPREG00000004155	sf1	59	78.947	ENSMOCG00000022038	Sf1	65	83.202	Microtus_ochrogaster
ENSPREG00000004155	sf1	67	86.184	ENSMMOG00000020474	sf1	66	86.404	Mola_mola
ENSPREG00000004155	sf1	59	78.759	ENSMODG00000029407	SF1	80	83.598	Monodelphis_domestica
ENSPREG00000004155	sf1	67	84.430	ENSMALG00000020521	sf1	72	84.430	Monopterus_albus
ENSPREG00000004155	sf1	59	78.947	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSPREG00000004155	sf1	59	78.947	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSPREG00000004155	sf1	59	78.947	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSPREG00000004155	sf1	59	78.947	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSPREG00000004155	sf1	59	78.947	ENSMPUG00000012684	SF1	58	83.333	Mustela_putorius_furo
ENSPREG00000004155	sf1	59	78.708	ENSMLUG00000015217	-	59	81.606	Myotis_lucifugus
ENSPREG00000004155	sf1	62	75.057	ENSMLUG00000029800	-	64	79.265	Myotis_lucifugus
ENSPREG00000004155	sf1	59	78.947	ENSNGAG00000005550	Sf1	65	83.202	Nannospalax_galili
ENSPREG00000004155	sf1	59	78.708	ENSNLEG00000005236	-	90	82.292	Nomascus_leucogenys
ENSPREG00000004155	sf1	58	78.832	ENSMEUG00000013424	SF1	68	83.827	Notamacropus_eugenii
ENSPREG00000004155	sf1	53	78.877	ENSOPRG00000005008	SF1	66	83.832	Ochotona_princeps
ENSPREG00000004155	sf1	67	89.670	ENSONIG00000015728	sf1	97	89.275	Oreochromis_niloticus
ENSPREG00000004155	sf1	59	78.708	ENSOCUG00000026486	SF1	59	83.333	Oryctolagus_cuniculus
ENSPREG00000004155	sf1	69	87.846	ENSORLG00000011853	sf1	66	89.427	Oryzias_latipes
ENSPREG00000004155	sf1	69	87.633	ENSORLG00020011834	sf1	66	89.207	Oryzias_latipes_hni
ENSPREG00000004155	sf1	68	88.621	ENSORLG00015012855	sf1	66	88.987	Oryzias_latipes_hsok
ENSPREG00000004155	sf1	68	89.278	ENSOMEG00000005210	sf1	97	89.362	Oryzias_melastigma
ENSPREG00000004155	sf1	59	78.708	ENSOGAG00000016196	SF1	58	82.940	Otolemur_garnettii
ENSPREG00000004155	sf1	59	78.708	ENSOARG00000009166	SF1	65	82.940	Ovis_aries
ENSPREG00000004155	sf1	59	79.277	ENSPPAG00000002799	-	90	83.333	Pan_paniscus
ENSPREG00000004155	sf1	59	78.708	ENSPPRG00000013566	SF1	57	84.488	Panthera_pardus
ENSPREG00000004155	sf1	59	78.708	ENSPTIG00000016141	SF1	67	82.507	Panthera_tigris_altaica
ENSPREG00000004155	sf1	60	78.873	ENSPTRG00000003846	SF1	90	82.292	Pan_troglodytes
ENSPREG00000004155	sf1	59	78.708	ENSPANG00000020754	SF1	90	82.292	Papio_anubis
ENSPREG00000004155	sf1	59	78.947	ENSPEMG00000010463	Sf1	65	83.465	Peromyscus_maniculatus_bairdii
ENSPREG00000004155	sf1	59	78.947	ENSPCIG00000018173	SF1	60	83.202	Phascolarctos_cinereus
ENSPREG00000004155	sf1	100	98.373	ENSPFOG00000013683	sf1	100	98.373	Poecilia_formosa
ENSPREG00000004155	sf1	93	98.413	ENSPLAG00000018076	sf1	96	98.413	Poecilia_latipinna
ENSPREG00000004155	sf1	100	98.521	ENSPMEG00000005726	sf1	100	98.521	Poecilia_mexicana
ENSPREG00000004155	sf1	59	78.708	ENSPPYG00000003098	-	70	82.940	Pongo_abelii
ENSPREG00000004155	sf1	59	78.469	ENSPCAG00000013631	SF1	75	68.689	Procavia_capensis
ENSPREG00000004155	sf1	59	78.708	ENSPCOG00000027546	SF1	90	82.078	Propithecus_coquereli
ENSPREG00000004155	sf1	59	78.947	ENSPVAG00000016938	SF1	75	70.495	Pteropus_vampyrus
ENSPREG00000004155	sf1	67	89.890	ENSPNYG00000004673	sf1	97	89.426	Pundamilia_nyererei
ENSPREG00000004155	sf1	68	82.035	ENSPNAG00000013072	sf1	97	83.535	Pygocentrus_nattereri
ENSPREG00000004155	sf1	59	78.947	ENSRNOG00000021085	Sf1	60	83.548	Rattus_norvegicus
ENSPREG00000004155	sf1	59	78.708	ENSRBIG00000042818	SF1	90	82.292	Rhinopithecus_bieti
ENSPREG00000004155	sf1	59	78.708	ENSRROG00000045655	SF1	91	81.818	Rhinopithecus_roxellana
ENSPREG00000004155	sf1	85	63.011	ENSSBOG00000022267	-	88	69.110	Saimiri_boliviensis_boliviensis
ENSPREG00000004155	sf1	70	71.869	ENSSHAG00000006841	SF1	68	84.946	Sarcophilus_harrisii
ENSPREG00000004155	sf1	71	80.290	ENSSFOG00015021978	sf1	66	81.798	Scleropages_formosus
ENSPREG00000004155	sf1	84	85.420	ENSSMAG00000007549	sf1	70	88.478	Scophthalmus_maximus
ENSPREG00000004155	sf1	67	89.497	ENSSDUG00000003903	sf1	98	89.844	Seriola_dumerili
ENSPREG00000004155	sf1	59	74.341	ENSSARG00000008180	SF1	71	78.515	Sorex_araneus
ENSPREG00000004155	sf1	59	78.788	ENSSPUG00000012907	SF1	58	86.761	Sphenodon_punctatus
ENSPREG00000004155	sf1	97	89.681	ENSSPAG00000019060	sf1	97	89.681	Stegastes_partitus
ENSPREG00000004155	sf1	59	78.708	ENSSSCG00000013021	SF1	68	82.940	Sus_scrofa
ENSPREG00000004155	sf1	72	71.591	ENSTNIG00000004820	sf1	72	76.215	Tetraodon_nigroviridis
ENSPREG00000004155	sf1	59	73.464	ENSTBEG00000013133	SF1	62	66.595	Tupaia_belangeri
ENSPREG00000004155	sf1	59	74.101	ENSTTRG00000008857	SF1	68	78.515	Tursiops_truncatus
ENSPREG00000004155	sf1	59	80.779	ENSUMAG00000007268	SF1	69	83.113	Ursus_maritimus
ENSPREG00000004155	sf1	59	78.708	ENSVVUG00000028585	SF1	68	82.940	Vulpes_vulpes
ENSPREG00000004155	sf1	85	72.945	ENSXETG00000008434	sf1	62	84.807	Xenopus_tropicalis
ENSPREG00000004155	sf1	71	92.153	ENSXCOG00000003704	sf1	94	92.153	Xiphophorus_couchianus
ENSPREG00000004155	sf1	100	98.225	ENSXMAG00000007822	sf1	100	98.225	Xiphophorus_maculatus