EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000004161 (Gene tree)
Gene ID: 103459267
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 583-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4064 bases
Position: chrLG23:5348869-5352932
Accession: 103459267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000005973	zf-C2H2	PF00096.26	3.4e-20	1	3
ENSPREP00000005973	zf-C2H2	PF00096.26	3.4e-20	2	3
ENSPREP00000005973	zf-C2H2	PF00096.26	3.4e-20	3	3
ENSPREP00000005983	zf-C2H2	PF00096.26	3.4e-20	1	3
ENSPREP00000005983	zf-C2H2	PF00096.26	3.4e-20	2	3
ENSPREP00000005983	zf-C2H2	PF00096.26	3.4e-20	3	3
ENSPREP00000005973	zf-met	PF12874.7	1.5e-06	1	1
ENSPREP00000005983	zf-met	PF12874.7	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000006064	-	1890	-	ENSPREP00000005983	629 (aa)	-	-
ENSPRET00000006054	-	1887	XM_008400687	ENSPREP00000005973	628 (aa)	XP_008398909	UPI0004A28DD9

Gene Model

Click here to download ENSPREG00000004161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000004161	-	61	40.991	ENSPREG00000013780	-	95	39.153
ENSPREG00000004161	-	74	38.136	ENSPREG00000011812	-	68	38.136
ENSPREG00000004161	-	51	34.562	ENSPREG00000000364	-	85	34.562
ENSPREG00000004161	-	57	39.264	ENSPREG00000018011	-	65	39.264
ENSPREG00000004161	-	50	33.491	ENSPREG00000003894	-	96	39.189
ENSPREG00000004161	-	51	36.667	ENSPREG00000015081	-	90	36.667
ENSPREG00000004161	-	99	36.530	ENSPREG00000007146	-	98	36.530
ENSPREG00000004161	-	97	35.417	ENSPREG00000007135	-	94	35.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004161	-	57	39.378	ENSAPOG00000021496	-	51	39.378	Acanthochromis_polyacanthus
ENSPREG00000004161	-	100	97.293	ENSGAFG00000016139	-	100	97.293	Gambusia_affinis
ENSPREG00000004161	-	55	35.802	ENSIPUG00000009577	-	68	35.802	Ictalurus_punctatus
ENSPREG00000004161	-	54	62.573	ENSMALG00000014761	-	99	62.573	Monopterus_albus
ENSPREG00000004161	-	99	62.679	ENSORLG00000014311	-	99	62.679	Oryzias_latipes
ENSPREG00000004161	-	99	62.998	ENSORLG00020016116	-	99	62.998	Oryzias_latipes_hni
ENSPREG00000004161	-	99	61.882	ENSORLG00015014797	-	99	61.882	Oryzias_latipes_hsok
ENSPREG00000004161	-	100	95.290	ENSPFOG00000004204	-	100	95.290	Poecilia_formosa
ENSPREG00000004161	-	100	97.611	ENSPLAG00000022088	-	94	97.611	Poecilia_latipinna
ENSPREG00000004161	-	100	97.611	ENSPMEG00000001411	-	94	97.611	Poecilia_mexicana
ENSPREG00000004161	-	96	66.722	ENSPNYG00000020534	-	99	66.445	Pundamilia_nyererei
ENSPREG00000004161	-	100	97.930	ENSXMAG00000011035	-	100	97.930	Xiphophorus_maculatus