EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000004213 (Gene tree)
Gene ID: 103482173
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12269 bases
Position: chrLG19:28104487-28116755
Accession: 103482173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000006136	KH_1	PF00013.29	4.1e-17	1	1
ENSPREP00000006111	KH_1	PF00013.29	1.5e-13	1	1
ENSPREP00000006136	TUDOR	PF00567.24	7.6e-25	1	1
ENSPREP00000006111	TUDOR	PF00567.24	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000006220	-	1764	-	ENSPREP00000006136	587 (aa)	-	-
ENSPRET00000006195	-	1671	XM_008438164	ENSPREP00000006111	556 (aa)	XP_008436386	-

Gene Model

Click here to download ENSPREG00000004213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004213	tdrkh	100	67.458	ENSAPOG00000012653	tdrkh	100	69.534	Acanthochromis_polyacanthus
ENSPREG00000004213	tdrkh	90	70.019	ENSACIG00000010318	tdrkh	99	70.019	Amphilophus_citrinellus
ENSPREG00000004213	tdrkh	97	67.908	ENSAOCG00000020623	tdrkh	100	70.609	Amphiprion_ocellaris
ENSPREG00000004213	tdrkh	94	69.176	ENSAPEG00000018388	tdrkh	100	70.789	Amphiprion_percula
ENSPREG00000004213	tdrkh	100	69.898	ENSATEG00000023809	tdrkh	100	70.683	Anabas_testudineus
ENSPREG00000004213	tdrkh	94	66.727	ENSACLG00000003017	tdrkh	100	66.727	Astatotilapia_calliptera
ENSPREG00000004213	tdrkh	99	57.216	ENSAMXG00000011664	tdrkh	99	57.216	Astyanax_mexicanus
ENSPREG00000004213	tdrkh	96	62.143	ENSCSEG00000002894	tdrkh	100	62.321	Cynoglossus_semilaevis
ENSPREG00000004213	tdrkh	57	83.495	ENSCVAG00000020347	tdrkh	76	83.495	Cyprinodon_variegatus
ENSPREG00000004213	tdrkh	99	57.045	ENSDARG00000053474	tdrkh	99	57.045	Danio_rerio
ENSPREG00000004213	tdrkh	100	59.764	ENSELUG00000024537	tdrkh	100	59.764	Esox_lucius
ENSPREG00000004213	tdrkh	94	79.673	ENSFHEG00000003544	tdrkh	100	79.673	Fundulus_heteroclitus
ENSPREG00000004213	tdrkh	100	62.500	ENSGMOG00000009304	tdrkh	100	62.500	Gadus_morhua
ENSPREG00000004213	tdrkh	94	90.110	ENSGAFG00000010754	tdrkh	97	93.561	Gambusia_affinis
ENSPREG00000004213	tdrkh	100	65.758	ENSGACG00000015258	tdrkh	100	65.758	Gasterosteus_aculeatus
ENSPREG00000004213	tdrkh	94	66.727	ENSHBUG00000017609	tdrkh	100	66.727	Haplochromis_burtoni
ENSPREG00000004213	tdrkh	94	57.420	ENSIPUG00000009673	tdrkh	99	57.420	Ictalurus_punctatus
ENSPREG00000004213	tdrkh	95	68.036	ENSKMAG00000016638	tdrkh	94	68.393	Kryptolebias_marmoratus
ENSPREG00000004213	tdrkh	96	68.972	ENSLBEG00000027323	tdrkh	99	68.972	Labrus_bergylta
ENSPREG00000004213	tdrkh	92	49.910	ENSLOCG00000011381	tdrkh	97	49.910	Lepisosteus_oculatus
ENSPREG00000004213	tdrkh	94	69.259	ENSMAMG00000020343	tdrkh	100	69.259	Mastacembelus_armatus
ENSPREG00000004213	tdrkh	94	66.727	ENSMZEG00005006755	tdrkh	100	66.727	Maylandia_zebra
ENSPREG00000004213	tdrkh	98	65.432	ENSMMOG00000020663	tdrkh	96	65.961	Mola_mola
ENSPREG00000004213	tdrkh	94	68.649	ENSMALG00000015401	tdrkh	100	68.649	Monopterus_albus
ENSPREG00000004213	tdrkh	94	65.018	ENSNBRG00000023815	tdrkh	100	65.018	Neolamprologus_brichardi
ENSPREG00000004213	tdrkh	94	63.734	ENSORLG00000029204	tdrkh	99	63.734	Oryzias_latipes
ENSPREG00000004213	tdrkh	89	64.607	ENSORLG00020016168	tdrkh	99	64.607	Oryzias_latipes_hni
ENSPREG00000004213	tdrkh	92	63.433	ENSORLG00015014094	tdrkh	97	65.185	Oryzias_latipes_hsok
ENSPREG00000004213	tdrkh	95	66.004	ENSOMEG00000015063	tdrkh	93	66.004	Oryzias_melastigma
ENSPREG00000004213	tdrkh	94	54.240	ENSPKIG00000017597	tdrkh	100	54.240	Paramormyrops_kingsleyae
ENSPREG00000004213	tdrkh	93	61.319	ENSPMGG00000019362	tdrkh	94	66.476	Periophthalmus_magnuspinnatus
ENSPREG00000004213	tdrkh	100	93.599	ENSPFOG00000013032	tdrkh	100	93.599	Poecilia_formosa
ENSPREG00000004213	tdrkh	94	93.040	ENSPLAG00000004193	tdrkh	97	96.591	Poecilia_latipinna
ENSPREG00000004213	tdrkh	94	93.407	ENSPMEG00000016502	tdrkh	97	97.159	Poecilia_mexicana
ENSPREG00000004213	tdrkh	93	65.809	ENSPNYG00000022818	tdrkh	97	68.587	Pundamilia_nyererei
ENSPREG00000004213	tdrkh	99	56.345	ENSPNAG00000008783	tdrkh	99	56.345	Pygocentrus_nattereri
ENSPREG00000004213	tdrkh	93	51.565	ENSSFOG00015001048	tdrkh	97	52.015	Scleropages_formosus
ENSPREG00000004213	tdrkh	97	66.132	ENSSMAG00000001532	tdrkh	100	68.817	Scophthalmus_maximus
ENSPREG00000004213	tdrkh	94	70.213	ENSSDUG00000013393	tdrkh	100	70.745	Seriola_dumerili
ENSPREG00000004213	tdrkh	100	69.682	ENSSLDG00000017418	tdrkh	100	71.099	Seriola_lalandi_dorsalis
ENSPREG00000004213	tdrkh	100	69.440	ENSSPAG00000006435	tdrkh	100	70.968	Stegastes_partitus
ENSPREG00000004213	tdrkh	90	66.355	ENSTRUG00000006644	tdrkh	97	66.355	Takifugu_rubripes
ENSPREG00000004213	tdrkh	94	63.734	ENSTNIG00000003157	tdrkh	99	64.452	Tetraodon_nigroviridis
ENSPREG00000004213	tdrkh	100	93.506	ENSXCOG00000016972	tdrkh	100	98.387	Xiphophorus_couchianus
ENSPREG00000004213	tdrkh	94	89.134	ENSXMAG00000014756	tdrkh	95	94.716	Xiphophorus_maculatus