EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000004561 (Gene tree)
Gene ID: 103471089
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 11287 bases
Position: chrLG10:9646290-9657576
Accession: 103471089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000006585	SLBP_RNA_bind	PF15247.6	2.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000006672	-	4520	XM_008419887	ENSPREP00000006585	270 (aa)	XP_008418109	UPI0004A29DC6

Gene Model

Click here to download ENSPREG00000004561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004561	slbp	89	52.049	ENSG00000163950	SLBP	81	54.206	Homo_sapiens
ENSPREG00000004561	slbp	100	74.205	ENSAPOG00000004953	slbp	100	74.205	Acanthochromis_polyacanthus
ENSPREG00000004561	slbp	54	66.225	ENSAMEG00000016915	SLBP	88	54.460	Ailuropoda_melanoleuca
ENSPREG00000004561	slbp	93	74.031	ENSACIG00000022308	slbp	97	74.031	Amphilophus_citrinellus
ENSPREG00000004561	slbp	100	72.792	ENSAOCG00000024545	slbp	100	72.792	Amphiprion_ocellaris
ENSPREG00000004561	slbp	100	72.792	ENSAPEG00000017629	slbp	100	72.792	Amphiprion_percula
ENSPREG00000004561	slbp	98	76.087	ENSATEG00000016358	slbp	97	76.087	Anabas_testudineus
ENSPREG00000004561	slbp	76	49.048	ENSAPLG00000015989	-	88	51.905	Anas_platyrhynchos
ENSPREG00000004561	slbp	88	50.000	ENSANAG00000034769	SLBP	81	54.206	Aotus_nancymaae
ENSPREG00000004561	slbp	95	72.862	ENSACLG00000007036	-	96	72.862	Astatotilapia_calliptera
ENSPREG00000004561	slbp	99	55.714	ENSAMXG00000014527	slbp	98	55.714	Astyanax_mexicanus
ENSPREG00000004561	slbp	80	53.333	ENSBTAG00000001328	SLBP	90	48.905	Bos_taurus
ENSPREG00000004561	slbp	88	51.029	ENSCJAG00000001790	SLBP	82	49.407	Callithrix_jacchus
ENSPREG00000004561	slbp	72	56.500	ENSCAFG00000015016	SLBP	82	51.613	Canis_familiaris
ENSPREG00000004561	slbp	72	56.500	ENSCAFG00020012334	SLBP	82	51.613	Canis_lupus_dingo
ENSPREG00000004561	slbp	80	54.054	ENSCHIG00000019364	SLBP	90	49.446	Capra_hircus
ENSPREG00000004561	slbp	89	52.459	ENSTSYG00000000376	SLBP	81	53.271	Carlito_syrichta
ENSPREG00000004561	slbp	67	55.319	ENSCPOG00000000031	SLBP	81	50.813	Cavia_porcellus
ENSPREG00000004561	slbp	89	52.049	ENSCATG00000029173	SLBP	81	54.206	Cercocebus_atys
ENSPREG00000004561	slbp	58	63.354	ENSCLAG00000008157	SLBP	83	51.417	Chinchilla_lanigera
ENSPREG00000004561	slbp	65	48.315	ENSCSAG00000015628	SLBP	61	48.066	Chlorocebus_sabaeus
ENSPREG00000004561	slbp	89	52.632	ENSCPBG00000000746	SLBP	82	52.632	Chrysemys_picta_bellii
ENSPREG00000004561	slbp	76	54.808	ENSCANG00000041008	SLBP	87	54.028	Colobus_angolensis_palliatus
ENSPREG00000004561	slbp	80	54.505	ENSCGRG00001009760	-	85	50.965	Cricetulus_griseus_chok1gshd
ENSPREG00000004561	slbp	79	53.211	ENSCGRG00001012991	-	86	49.804	Cricetulus_griseus_chok1gshd
ENSPREG00000004561	slbp	80	54.505	ENSCGRG00000004506	Slbp	85	50.965	Cricetulus_griseus_crigri
ENSPREG00000004561	slbp	98	71.004	ENSCSEG00000020337	-	98	71.004	Cynoglossus_semilaevis
ENSPREG00000004561	slbp	100	78.467	ENSCVAG00000019592	-	100	78.832	Cyprinodon_variegatus
ENSPREG00000004561	slbp	96	56.134	ENSDARG00000100558	slbp	87	56.877	Danio_rerio
ENSPREG00000004561	slbp	72	56.039	ENSDNOG00000047539	SLBP	84	50.000	Dasypus_novemcinctus
ENSPREG00000004561	slbp	54	61.074	ENSDORG00000003028	Slbp	90	64.052	Dipodomys_ordii
ENSPREG00000004561	slbp	68	55.497	ENSETEG00000004641	SLBP	87	54.028	Echinops_telfairi
ENSPREG00000004561	slbp	51	58.865	ENSEASG00005022714	SLBP	86	52.432	Equus_asinus_asinus
ENSPREG00000004561	slbp	67	61.290	ENSECAG00000011689	SLBP	59	60.847	Equus_caballus
ENSPREG00000004561	slbp	98	57.401	ENSELUG00000012854	slbp	97	57.401	Esox_lucius
ENSPREG00000004561	slbp	72	54.040	ENSFCAG00000000169	SLBP	88	51.037	Felis_catus
ENSPREG00000004561	slbp	89	50.403	ENSFALG00000010003	-	84	50.403	Ficedula_albicollis
ENSPREG00000004561	slbp	68	60.000	ENSFDAG00000007592	SLBP	89	52.000	Fukomys_damarensis
ENSPREG00000004561	slbp	100	83.026	ENSFHEG00000007497	slbp	100	81.550	Fundulus_heteroclitus
ENSPREG00000004561	slbp	57	73.248	ENSGMOG00000015352	slbp	100	72.500	Gadus_morhua
ENSPREG00000004561	slbp	97	49.446	ENSGALG00000015712	SLBP	90	49.446	Gallus_gallus
ENSPREG00000004561	slbp	100	97.778	ENSGAFG00000019577	slbp	100	97.778	Gambusia_affinis
ENSPREG00000004561	slbp	92	67.451	ENSGACG00000019596	slbp	93	67.451	Gasterosteus_aculeatus
ENSPREG00000004561	slbp	74	57.692	ENSGAGG00000012096	SLBP	83	57.692	Gopherus_agassizii
ENSPREG00000004561	slbp	89	52.049	ENSGGOG00000003167	SLBP	81	54.206	Gorilla_gorilla
ENSPREG00000004561	slbp	95	73.234	ENSHBUG00000003338	-	96	73.234	Haplochromis_burtoni
ENSPREG00000004561	slbp	60	55.357	ENSHGLG00000010461	-	84	46.667	Heterocephalus_glaber_female
ENSPREG00000004561	slbp	64	51.705	ENSHGLG00000008313	-	84	44.355	Heterocephalus_glaber_female
ENSPREG00000004561	slbp	60	55.357	ENSHGLG00100014906	-	84	46.667	Heterocephalus_glaber_male
ENSPREG00000004561	slbp	64	52.273	ENSHGLG00100010510	-	84	45.161	Heterocephalus_glaber_male
ENSPREG00000004561	slbp	67	61.497	ENSHGLG00100014018	-	90	62.234	Heterocephalus_glaber_male
ENSPREG00000004561	slbp	98	70.301	ENSHCOG00000013425	slbp	97	70.301	Hippocampus_comes
ENSPREG00000004561	slbp	89	55.691	ENSIPUG00000016780	slbp	91	55.691	Ictalurus_punctatus
ENSPREG00000004561	slbp	73	57.711	ENSSTOG00000003262	SLBP	83	52.000	Ictidomys_tridecemlineatus
ENSPREG00000004561	slbp	76	56.459	ENSJJAG00000002394	-	82	50.612	Jaculus_jaculus
ENSPREG00000004561	slbp	85	47.826	ENSJJAG00000020549	-	82	52.439	Jaculus_jaculus
ENSPREG00000004561	slbp	100	75.986	ENSKMAG00000008187	slbp	99	75.986	Kryptolebias_marmoratus
ENSPREG00000004561	slbp	98	70.741	ENSLBEG00000024709	slbp	97	70.741	Labrus_bergylta
ENSPREG00000004561	slbp	92	48.855	ENSLACG00000014623	SLBP	87	50.198	Latimeria_chalumnae
ENSPREG00000004561	slbp	95	58.029	ENSLOCG00000011027	slbp	90	58.029	Lepisosteus_oculatus
ENSPREG00000004561	slbp	75	57.488	ENSLAFG00000012933	SLBP	83	56.604	Loxodonta_africana
ENSPREG00000004561	slbp	88	51.852	ENSMFAG00000030130	SLBP	74	50.777	Macaca_fascicularis
ENSPREG00000004561	slbp	89	50.598	ENSMMUG00000032303	SLBP	84	54.717	Macaca_mulatta
ENSPREG00000004561	slbp	51	51.678	ENSMNEG00000008082	SLBP	64	51.316	Macaca_nemestrina
ENSPREG00000004561	slbp	86	50.847	ENSMLEG00000024639	SLBP	76	54.717	Mandrillus_leucophaeus
ENSPREG00000004561	slbp	98	68.841	ENSMAMG00000001046	-	97	68.841	Mastacembelus_armatus
ENSPREG00000004561	slbp	95	73.234	ENSMZEG00005017261	-	96	73.234	Maylandia_zebra
ENSPREG00000004561	slbp	76	52.657	ENSMGAG00000013085	SLBP	87	53.140	Meleagris_gallopavo
ENSPREG00000004561	slbp	80	54.751	ENSMAUG00000009490	Slbp	85	51.163	Mesocricetus_auratus
ENSPREG00000004561	slbp	63	60.571	ENSMICG00000014244	SLBP	81	52.033	Microcebus_murinus
ENSPREG00000004561	slbp	76	55.450	ENSMOCG00000015826	Slbp	85	59.788	Microtus_ochrogaster
ENSPREG00000004561	slbp	91	65.726	ENSMMOG00000010181	slbp	93	65.726	Mola_mola
ENSPREG00000004561	slbp	72	57.767	ENSMODG00000004304	SLBP	88	52.549	Monodelphis_domestica
ENSPREG00000004561	slbp	100	72.535	ENSMALG00000013883	-	74	72.535	Monopterus_albus
ENSPREG00000004561	slbp	76	55.924	MGP_CAROLIEiJ_G0027117	Slbp	82	60.317	Mus_caroli
ENSPREG00000004561	slbp	76	55.924	ENSMUSG00000004642	Slbp	83	60.317	Mus_musculus
ENSPREG00000004561	slbp	76	55.924	MGP_PahariEiJ_G0016901	Slbp	82	60.317	Mus_pahari
ENSPREG00000004561	slbp	76	55.924	MGP_SPRETEiJ_G0028113	Slbp	83	60.317	Mus_spretus
ENSPREG00000004561	slbp	62	55.233	ENSMPUG00000011139	SLBP	79	54.857	Mustela_putorius_furo
ENSPREG00000004561	slbp	55	61.184	ENSMLUG00000004425	SLBP	64	56.954	Myotis_lucifugus
ENSPREG00000004561	slbp	76	54.976	ENSNGAG00000020799	Slbp	82	51.429	Nannospalax_galili
ENSPREG00000004561	slbp	87	73.790	ENSNBRG00000006044	-	94	73.790	Neolamprologus_brichardi
ENSPREG00000004561	slbp	89	50.598	ENSNLEG00000000048	SLBP	81	54.206	Nomascus_leucogenys
ENSPREG00000004561	slbp	53	67.123	ENSMEUG00000002501	SLBP	91	59.322	Notamacropus_eugenii
ENSPREG00000004561	slbp	58	64.596	ENSODEG00000012641	SLBP	85	51.822	Octodon_degus
ENSPREG00000004561	slbp	93	73.282	ENSONIG00000017469	-	94	73.282	Oreochromis_niloticus
ENSPREG00000004561	slbp	76	55.825	ENSOANG00000014243	SLBP	83	55.825	Ornithorhynchus_anatinus
ENSPREG00000004561	slbp	97	66.792	ENSORLG00000024887	-	96	66.792	Oryzias_latipes
ENSPREG00000004561	slbp	98	65.283	ENSORLG00020007798	slbp	96	65.779	Oryzias_latipes_hni
ENSPREG00000004561	slbp	98	65.414	ENSORLG00015016656	slbp	96	65.909	Oryzias_latipes_hsok
ENSPREG00000004561	slbp	98	64.286	ENSOMEG00000010818	slbp	97	65.038	Oryzias_melastigma
ENSPREG00000004561	slbp	89	53.279	ENSOGAG00000009750	SLBP	81	53.036	Otolemur_garnettii
ENSPREG00000004561	slbp	59	61.585	ENSOARG00000016090	SLBP	88	53.991	Ovis_aries
ENSPREG00000004561	slbp	89	52.049	ENSPPAG00000033300	SLBP	81	54.206	Pan_paniscus
ENSPREG00000004561	slbp	61	56.213	ENSPPRG00000016897	SLBP	89	51.626	Panthera_pardus
ENSPREG00000004561	slbp	88	51.852	ENSPTRG00000015832	SLBP	81	54.206	Pan_troglodytes
ENSPREG00000004561	slbp	89	49.801	ENSPANG00000004932	SLBP	81	54.206	Papio_anubis
ENSPREG00000004561	slbp	91	59.375	ENSPKIG00000006183	slbp	93	57.664	Paramormyrops_kingsleyae
ENSPREG00000004561	slbp	80	65.471	ENSPMGG00000017684	-	99	65.990	Periophthalmus_magnuspinnatus
ENSPREG00000004561	slbp	76	55.450	ENSPEMG00000018369	Slbp	82	51.613	Peromyscus_maniculatus_bairdii
ENSPREG00000004561	slbp	72	55.607	ENSPCIG00000013575	SLBP	70	50.951	Phascolarctos_cinereus
ENSPREG00000004561	slbp	100	99.630	ENSPFOG00000000462	slbp	100	99.630	Poecilia_formosa
ENSPREG00000004561	slbp	100	98.889	ENSPLAG00000008300	slbp	100	98.889	Poecilia_latipinna
ENSPREG00000004561	slbp	100	99.630	ENSPMEG00000020807	slbp	100	99.630	Poecilia_mexicana
ENSPREG00000004561	slbp	89	52.049	ENSPPYG00000014529	SLBP	81	51.822	Pongo_abelii
ENSPREG00000004561	slbp	92	52.362	ENSPCOG00000017399	SLBP	84	52.140	Propithecus_coquereli
ENSPREG00000004561	slbp	97	48.315	ENSPVAG00000002807	SLBP	90	48.148	Pteropus_vampyrus
ENSPREG00000004561	slbp	95	73.234	ENSPNYG00000005451	-	96	73.234	Pundamilia_nyererei
ENSPREG00000004561	slbp	100	54.064	ENSPNAG00000018503	slbp	100	54.064	Pygocentrus_nattereri
ENSPREG00000004561	slbp	76	55.924	ENSRNOG00000037162	Slbp	82	52.016	Rattus_norvegicus
ENSPREG00000004561	slbp	89	52.049	ENSRBIG00000039159	SLBP	81	54.206	Rhinopithecus_bieti
ENSPREG00000004561	slbp	89	52.049	ENSRROG00000030081	SLBP	83	51.822	Rhinopithecus_roxellana
ENSPREG00000004561	slbp	66	53.591	ENSSBOG00000033897	SLBP	86	52.717	Saimiri_boliviensis_boliviensis
ENSPREG00000004561	slbp	75	53.812	ENSSHAG00000013939	SLBP	84	49.632	Sarcophilus_harrisii
ENSPREG00000004561	slbp	98	56.777	ENSSFOG00015019429	slbp	97	56.777	Scleropages_formosus
ENSPREG00000004561	slbp	98	69.203	ENSSMAG00000016028	-	97	69.203	Scophthalmus_maximus
ENSPREG00000004561	slbp	100	75.725	ENSSDUG00000000855	-	100	75.725	Seriola_dumerili
ENSPREG00000004561	slbp	54	78.808	ENSSLDG00000022893	-	87	81.507	Seriola_lalandi_dorsalis
ENSPREG00000004561	slbp	93	55.078	ENSSLDG00000007554	-	83	54.297	Seriola_lalandi_dorsalis
ENSPREG00000004561	slbp	90	47.154	ENSSPUG00000016007	SLBP	87	50.000	Sphenodon_punctatus
ENSPREG00000004561	slbp	99	73.818	ENSSPAG00000004021	slbp	100	74.419	Stegastes_partitus
ENSPREG00000004561	slbp	73	57.426	ENSSSCG00000008676	SLBP	84	51.383	Sus_scrofa
ENSPREG00000004561	slbp	89	50.607	ENSTGUG00000010626	-	88	51.012	Taeniopygia_guttata
ENSPREG00000004561	slbp	98	70.522	ENSTRUG00000000688	slbp	97	71.375	Takifugu_rubripes
ENSPREG00000004561	slbp	91	68.548	ENSTNIG00000000484	-	98	68.548	Tetraodon_nigroviridis
ENSPREG00000004561	slbp	72	31.472	ENSTBEG00000004085	SLBP	88	31.276	Tupaia_belangeri
ENSPREG00000004561	slbp	54	66.000	ENSTTRG00000010901	-	88	54.067	Tursiops_truncatus
ENSPREG00000004561	slbp	54	61.333	ENSTTRG00000004010	-	91	56.024	Tursiops_truncatus
ENSPREG00000004561	slbp	67	61.290	ENSUAMG00000012990	SLBP	81	52.016	Ursus_americanus
ENSPREG00000004561	slbp	72	56.500	ENSVVUG00000015578	-	82	51.210	Vulpes_vulpes
ENSPREG00000004561	slbp	92	50.000	ENSXETG00000003876	slbp	87	50.000	Xenopus_tropicalis
ENSPREG00000004561	slbp	93	94.841	ENSXCOG00000008275	slbp	98	94.841	Xiphophorus_couchianus
ENSPREG00000004561	slbp	100	97.407	ENSXMAG00000001331	-	99	97.407	Xiphophorus_maculatus