EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000004937 (Gene tree)
Gene ID: 103474767
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9154 bases
Position: chrLG13:21201145-21210298
Accession: 103474767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007235	SRP54	PF00448.22	1e-47	1	1
ENSPREP00000007205	SRP54	PF00448.22	1.3e-47	1	1
ENSPREP00000007235	SRP54_N	PF02881.19	2.2e-09	1	1
ENSPREP00000007205	SRP54_N	PF02881.19	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007327	-	1758	-	ENSPREP00000007235	585 (aa)	-	-
ENSPRET00000007296	-	1968	XM_008425978	ENSPREP00000007205	650 (aa)	XP_008424200	UPI0004A2D880

Gene Model

Click here to download ENSPREG00000004937's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004937	srpra	100	68.835	ENSG00000182934	SRPRA	100	68.278	Homo_sapiens
ENSPREG00000004937	srpra	100	90.154	ENSAPOG00000017588	srpra	100	90.154	Acanthochromis_polyacanthus
ENSPREG00000004937	srpra	100	69.219	ENSAMEG00000000117	SRPRA	100	68.778	Ailuropoda_melanoleuca
ENSPREG00000004937	srpra	100	84.923	ENSACIG00000021588	srpra	100	86.000	Amphilophus_citrinellus
ENSPREG00000004937	srpra	100	90.308	ENSAOCG00000018884	srpra	100	90.308	Amphiprion_ocellaris
ENSPREG00000004937	srpra	100	90.308	ENSAPEG00000022286	srpra	100	86.847	Amphiprion_percula
ENSPREG00000004937	srpra	100	86.196	ENSATEG00000023578	srpra	95	94.545	Anabas_testudineus
ENSPREG00000004937	srpra	94	71.890	ENSAPLG00000016079	SRPRA	99	71.405	Anas_platyrhynchos
ENSPREG00000004937	srpra	100	71.128	ENSACAG00000000108	SRPRA	100	70.420	Anolis_carolinensis
ENSPREG00000004937	srpra	100	68.477	ENSANAG00000020346	SRPRA	100	68.477	Aotus_nancymaae
ENSPREG00000004937	srpra	100	87.231	ENSACLG00000000518	srpra	100	87.077	Astatotilapia_calliptera
ENSPREG00000004937	srpra	100	73.573	ENSAMXG00000009975	srpra	96	93.016	Astyanax_mexicanus
ENSPREG00000004937	srpra	100	69.231	ENSBTAG00000014105	SRPRA	100	69.369	Bos_taurus
ENSPREG00000004937	srpra	99	49.017	WBGene00009521	F38A1.8	99	48.499	Caenorhabditis_elegans
ENSPREG00000004937	srpra	100	68.079	ENSCJAG00000008752	SRPRA	100	68.594	Callithrix_jacchus
ENSPREG00000004937	srpra	100	67.927	ENSCAFG00000010474	SRPRA	100	67.119	Canis_familiaris
ENSPREG00000004937	srpra	100	69.592	ENSCAFG00020010608	SRPRA	100	68.778	Canis_lupus_dingo
ENSPREG00000004937	srpra	100	69.803	ENSCHIG00000012423	SRPRA	100	68.741	Capra_hircus
ENSPREG00000004937	srpra	100	70.940	ENSTSYG00000005187	SRPRA	100	87.937	Carlito_syrichta
ENSPREG00000004937	srpra	94	70.415	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSPREG00000004937	srpra	100	68.731	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSPREG00000004937	srpra	100	68.939	ENSCCAG00000025602	SRPRA	100	68.487	Cebus_capucinus
ENSPREG00000004937	srpra	100	68.778	ENSCATG00000039354	SRPRA	100	68.223	Cercocebus_atys
ENSPREG00000004937	srpra	100	69.044	ENSCLAG00000016839	SRPRA	100	69.062	Chinchilla_lanigera
ENSPREG00000004937	srpra	100	68.627	ENSCSAG00000002271	SRPRA	100	67.825	Chlorocebus_sabaeus
ENSPREG00000004937	srpra	53	87.755	ENSCHOG00000010015	-	72	87.755	Choloepus_hoffmanni
ENSPREG00000004937	srpra	100	71.064	ENSCPBG00000011128	SRPRA	100	71.214	Chrysemys_picta_bellii
ENSPREG00000004937	srpra	85	77.188	ENSCING00000008954	-	100	58.104	Ciona_intestinalis
ENSPREG00000004937	srpra	96	77.812	ENSCSAVG00000005602	-	100	59.164	Ciona_savignyi
ENSPREG00000004937	srpra	100	68.778	ENSCANG00000032337	SRPRA	100	68.223	Colobus_angolensis_palliatus
ENSPREG00000004937	srpra	100	69.242	ENSCGRG00001017670	Srpr	100	69.231	Cricetulus_griseus_chok1gshd
ENSPREG00000004937	srpra	100	69.242	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSPREG00000004937	srpra	100	84.839	ENSCSEG00000002374	srpra	100	84.380	Cynoglossus_semilaevis
ENSPREG00000004937	srpra	100	90.658	ENSCVAG00000019881	srpra	100	90.812	Cyprinodon_variegatus
ENSPREG00000004937	srpra	100	77.710	ENSDARG00000061124	srpra	100	77.710	Danio_rerio
ENSPREG00000004937	srpra	100	68.460	ENSDNOG00000010821	SRPRA	100	67.713	Dasypus_novemcinctus
ENSPREG00000004937	srpra	100	69.171	ENSDORG00000016719	Srpr	100	69.375	Dipodomys_ordii
ENSPREG00000004937	srpra	99	51.368	FBgn0010391	Gtp-bp	100	52.194	Drosophila_melanogaster
ENSPREG00000004937	srpra	100	68.030	ENSETEG00000013956	SRPRA	100	67.134	Echinops_telfairi
ENSPREG00000004937	srpra	55	83.025	ENSEBUG00000002602	srpra	93	73.267	Eptatretus_burgeri
ENSPREG00000004937	srpra	100	69.062	ENSEASG00005022980	SRPRA	100	68.438	Equus_asinus_asinus
ENSPREG00000004937	srpra	100	69.062	ENSECAG00000014692	SRPRA	100	68.438	Equus_caballus
ENSPREG00000004937	srpra	100	64.431	ENSEEUG00000007920	SRPRA	100	64.275	Erinaceus_europaeus
ENSPREG00000004937	srpra	100	84.251	ENSELUG00000017643	srpra	100	83.896	Esox_lucius
ENSPREG00000004937	srpra	100	70.136	ENSFCAG00000011274	-	100	68.778	Felis_catus
ENSPREG00000004937	srpra	80	64.860	ENSFCAG00000030894	-	99	63.178	Felis_catus
ENSPREG00000004937	srpra	99	69.102	ENSFALG00000005048	SRPRA	99	68.341	Ficedula_albicollis
ENSPREG00000004937	srpra	100	68.701	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSPREG00000004937	srpra	100	93.702	ENSFHEG00000016959	srpra	100	93.702	Fundulus_heteroclitus
ENSPREG00000004937	srpra	100	81.595	ENSGMOG00000013244	srpra	100	81.442	Gadus_morhua
ENSPREG00000004937	srpra	100	72.121	ENSGALG00000030759	SRPRA	100	71.818	Gallus_gallus
ENSPREG00000004937	srpra	100	96.462	ENSGAFG00000000453	srpra	100	96.462	Gambusia_affinis
ENSPREG00000004937	srpra	100	83.155	ENSGACG00000006550	srpra	100	82.923	Gasterosteus_aculeatus
ENSPREG00000004937	srpra	100	71.514	ENSGAGG00000021157	SRPRA	100	71.664	Gopherus_agassizii
ENSPREG00000004937	srpra	100	68.835	ENSGGOG00000012962	SRPRA	100	68.278	Gorilla_gorilla
ENSPREG00000004937	srpra	100	87.077	ENSHBUG00000000119	srpra	100	86.923	Haplochromis_burtoni
ENSPREG00000004937	srpra	100	68.701	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSPREG00000004937	srpra	100	68.701	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSPREG00000004937	srpra	100	85.605	ENSHCOG00000010749	srpra	100	85.911	Hippocampus_comes
ENSPREG00000004937	srpra	94	74.557	ENSIPUG00000000867	srpra	99	75.487	Ictalurus_punctatus
ENSPREG00000004937	srpra	100	68.589	ENSSTOG00000009897	SRPRA	100	68.835	Ictidomys_tridecemlineatus
ENSPREG00000004937	srpra	100	68.545	ENSJJAG00000020272	Srpr	100	69.219	Jaculus_jaculus
ENSPREG00000004937	srpra	100	89.417	ENSKMAG00000002280	srpra	100	90.184	Kryptolebias_marmoratus
ENSPREG00000004937	srpra	100	87.711	ENSLBEG00000009608	srpra	100	87.865	Labrus_bergylta
ENSPREG00000004937	srpra	93	76.904	ENSLACG00000017781	SRPRA	100	71.171	Latimeria_chalumnae
ENSPREG00000004937	srpra	100	76.596	ENSLOCG00000002733	srpra	100	76.292	Lepisosteus_oculatus
ENSPREG00000004937	srpra	100	68.127	ENSLAFG00000010252	SRPRA	100	67.551	Loxodonta_africana
ENSPREG00000004937	srpra	100	68.778	ENSMFAG00000032606	SRPRA	100	67.976	Macaca_fascicularis
ENSPREG00000004937	srpra	100	68.778	ENSMMUG00000007938	SRPRA	100	67.976	Macaca_mulatta
ENSPREG00000004937	srpra	100	68.892	ENSMNEG00000030709	SRPRA	100	68.333	Macaca_nemestrina
ENSPREG00000004937	srpra	100	68.778	ENSMLEG00000043404	SRPRA	100	68.223	Mandrillus_leucophaeus
ENSPREG00000004937	srpra	100	85.385	ENSMAMG00000000473	srpra	100	86.154	Mastacembelus_armatus
ENSPREG00000004937	srpra	100	87.231	ENSMZEG00005013432	srpra	100	87.077	Maylandia_zebra
ENSPREG00000004937	srpra	94	71.521	ENSMGAG00000000732	SRPRA	100	71.197	Meleagris_gallopavo
ENSPREG00000004937	srpra	100	69.242	ENSMAUG00000015648	Srpr	100	68.858	Mesocricetus_auratus
ENSPREG00000004937	srpra	100	68.477	ENSMICG00000015981	SRPRA	100	67.372	Microcebus_murinus
ENSPREG00000004937	srpra	100	68.939	ENSMOCG00000008311	Srpr	100	69.014	Microtus_ochrogaster
ENSPREG00000004937	srpra	100	81.422	ENSMMOG00000005019	srpra	100	80.291	Mola_mola
ENSPREG00000004937	srpra	100	69.499	ENSMODG00000004576	-	100	68.285	Monodelphis_domestica
ENSPREG00000004937	srpra	100	88.462	ENSMALG00000011343	srpra	100	88.462	Monopterus_albus
ENSPREG00000004937	srpra	100	68.835	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSPREG00000004937	srpra	100	69.484	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSPREG00000004937	srpra	100	69.033	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSPREG00000004937	srpra	100	66.089	MGP_SPRETEiJ_G0033075	Srpr	100	65.945	Mus_spretus
ENSPREG00000004937	srpra	100	68.986	ENSMPUG00000006626	SRPRA	100	68.627	Mustela_putorius_furo
ENSPREG00000004937	srpra	100	69.605	ENSMLUG00000017334	SRPRA	100	69.797	Myotis_lucifugus
ENSPREG00000004937	srpra	100	68.437	ENSNGAG00000015686	Srpr	100	68.594	Nannospalax_galili
ENSPREG00000004937	srpra	100	86.462	ENSNBRG00000017311	srpra	100	86.308	Neolamprologus_brichardi
ENSPREG00000004937	srpra	99	65.145	ENSNLEG00000007467	SRPRA	100	68.196	Nomascus_leucogenys
ENSPREG00000004937	srpra	94	68.429	ENSMEUG00000004956	SRPRA	100	67.147	Notamacropus_eugenii
ENSPREG00000004937	srpra	100	65.165	ENSOPRG00000013160	SRPRA	100	64.743	Ochotona_princeps
ENSPREG00000004937	srpra	100	69.347	ENSODEG00000004730	SRPRA	100	68.125	Octodon_degus
ENSPREG00000004937	srpra	100	86.769	ENSONIG00000005324	srpra	100	86.615	Oreochromis_niloticus
ENSPREG00000004937	srpra	100	68.778	ENSOCUG00000017057	SRPRA	100	68.778	Oryctolagus_cuniculus
ENSPREG00000004937	srpra	100	85.692	ENSORLG00000014676	srpra	100	85.077	Oryzias_latipes
ENSPREG00000004937	srpra	100	85.692	ENSORLG00020009240	srpra	100	85.077	Oryzias_latipes_hni
ENSPREG00000004937	srpra	100	85.385	ENSORLG00015015405	srpra	100	84.769	Oryzias_latipes_hsok
ENSPREG00000004937	srpra	100	86.154	ENSOMEG00000005872	srpra	100	85.538	Oryzias_melastigma
ENSPREG00000004937	srpra	100	69.415	ENSOGAG00000008926	SRPRA	100	68.366	Otolemur_garnettii
ENSPREG00000004937	srpra	100	66.768	ENSOARG00000012397	SRPRA	100	66.512	Ovis_aries
ENSPREG00000004937	srpra	100	68.835	ENSPPAG00000030813	SRPRA	100	68.278	Pan_paniscus
ENSPREG00000004937	srpra	100	70.136	ENSPPRG00000001542	SRPRA	100	68.778	Panthera_pardus
ENSPREG00000004937	srpra	100	69.985	ENSPTIG00000006989	SRPRA	100	68.627	Panthera_tigris_altaica
ENSPREG00000004937	srpra	100	68.835	ENSPTRG00000028360	SRPRA	100	68.278	Pan_troglodytes
ENSPREG00000004937	srpra	100	68.778	ENSPANG00000010858	SRPRA	100	67.976	Papio_anubis
ENSPREG00000004937	srpra	100	74.848	ENSPKIG00000016106	srpra	100	75.994	Paramormyrops_kingsleyae
ENSPREG00000004937	srpra	94	70.994	ENSPSIG00000012009	SRPRA	100	71.200	Pelodiscus_sinensis
ENSPREG00000004937	srpra	100	84.227	ENSPMGG00000001393	srpra	100	82.848	Periophthalmus_magnuspinnatus
ENSPREG00000004937	srpra	100	69.091	ENSPEMG00000018279	Srpr	100	69.171	Peromyscus_maniculatus_bairdii
ENSPREG00000004937	srpra	99	63.037	ENSPMAG00000009559	srpra	99	62.940	Petromyzon_marinus
ENSPREG00000004937	srpra	100	69.102	ENSPCIG00000010207	SRPRA	100	68.741	Phascolarctos_cinereus
ENSPREG00000004937	srpra	100	97.846	ENSPFOG00000003114	srpra	100	97.846	Poecilia_formosa
ENSPREG00000004937	srpra	100	97.846	ENSPLAG00000007323	srpra	100	97.846	Poecilia_latipinna
ENSPREG00000004937	srpra	100	97.692	ENSPMEG00000015658	srpra	100	97.692	Poecilia_mexicana
ENSPREG00000004937	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSPREG00000004937	srpra	63	90.698	ENSPCAG00000003801	-	63	90.698	Procavia_capensis
ENSPREG00000004937	srpra	100	68.326	ENSPCOG00000025726	SRPRA	100	67.771	Propithecus_coquereli
ENSPREG00000004937	srpra	100	69.149	ENSPVAG00000000993	SRPRA	100	69.014	Pteropus_vampyrus
ENSPREG00000004937	srpra	100	87.231	ENSPNYG00000012371	srpra	100	87.077	Pundamilia_nyererei
ENSPREG00000004937	srpra	100	79.294	ENSPNAG00000013476	srpra	100	79.294	Pygocentrus_nattereri
ENSPREG00000004937	srpra	100	68.652	ENSRNOG00000010543	Srpra	100	69.231	Rattus_norvegicus
ENSPREG00000004937	srpra	100	69.033	ENSRBIG00000008702	SRPRA	100	67.976	Rhinopithecus_bieti
ENSPREG00000004937	srpra	100	68.778	ENSRROG00000029494	SRPRA	100	68.175	Rhinopithecus_roxellana
ENSPREG00000004937	srpra	58	41.061	YDR292C	-	52	41.945	Saccharomyces_cerevisiae
ENSPREG00000004937	srpra	100	68.326	ENSSBOG00000035892	SRPRA	100	68.326	Saimiri_boliviensis_boliviensis
ENSPREG00000004937	srpra	94	68.821	ENSSHAG00000009168	SRPRA	100	67.690	Sarcophilus_harrisii
ENSPREG00000004937	srpra	100	78.859	ENSSFOG00015008837	srpra	100	79.766	Scleropages_formosus
ENSPREG00000004937	srpra	100	82.102	ENSSMAG00000002783	srpra	100	81.773	Scophthalmus_maximus
ENSPREG00000004937	srpra	100	89.094	ENSSDUG00000013920	srpra	100	88.075	Seriola_dumerili
ENSPREG00000004937	srpra	100	88.940	ENSSLDG00000008601	srpra	93	88.940	Seriola_lalandi_dorsalis
ENSPREG00000004937	srpra	82	85.366	ENSSARG00000012434	SRPRA	86	85.366	Sorex_araneus
ENSPREG00000004937	srpra	100	68.524	ENSSPUG00000018221	SRPRA	100	68.263	Sphenodon_punctatus
ENSPREG00000004937	srpra	100	90.337	ENSSPAG00000005103	srpra	100	90.337	Stegastes_partitus
ENSPREG00000004937	srpra	100	69.894	ENSSSCG00000015227	SRPRA	100	69.159	Sus_scrofa
ENSPREG00000004937	srpra	94	69.021	ENSTGUG00000000815	SRPRA	100	68.218	Taeniopygia_guttata
ENSPREG00000004937	srpra	100	85.407	ENSTRUG00000006856	srpra	100	84.769	Takifugu_rubripes
ENSPREG00000004937	srpra	100	79.035	ENSTNIG00000010316	srpra	100	79.186	Tetraodon_nigroviridis
ENSPREG00000004937	srpra	100	69.003	ENSTTRG00000001558	SRPRA	100	68.919	Tursiops_truncatus
ENSPREG00000004937	srpra	100	68.919	ENSUAMG00000005510	SRPRA	100	68.692	Ursus_americanus
ENSPREG00000004937	srpra	89	72.304	ENSUMAG00000002269	SRPRA	100	63.328	Ursus_maritimus
ENSPREG00000004937	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSPREG00000004937	srpra	100	69.592	ENSVVUG00000020094	SRPRA	100	68.477	Vulpes_vulpes
ENSPREG00000004937	srpra	100	60.241	ENSXETG00000003920	srpra	100	61.070	Xenopus_tropicalis
ENSPREG00000004937	srpra	87	97.898	ENSXCOG00000001286	srpra	100	97.898	Xiphophorus_couchianus
ENSPREG00000004937	srpra	100	96.000	ENSXMAG00000028401	srpra	100	96.000	Xiphophorus_maculatus