EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000004954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5027 bases
Position: chrKK215998.1:21-5047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007190	RVT_1	PF00078.27	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007281	-	5027	-	ENSPREP00000007190	1528 (aa)	-	-

Gene Model

Click here to download ENSPREG00000004954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000004954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000004954	-	50	38.889	ENSPREG00000005745	-	73	41.600
ENSPREG00000004954	-	99	55.577	ENSPREG00000000390	-	99	55.612
ENSPREG00000004954	-	58	30.909	ENSPREG00000003809	-	67	30.909
ENSPREG00000004954	-	53	38.053	ENSPREG00000005134	-	66	38.053
ENSPREG00000004954	-	55	36.889	ENSPREG00000004621	-	55	36.889
ENSPREG00000004954	-	50	33.412	ENSPREG00000013866	-	55	32.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000004954	-	58	40.812	ENSAPOG00000012135	-	75	40.787	Acanthochromis_polyacanthus
ENSPREG00000004954	-	61	39.639	ENSAPOG00000008045	-	94	39.532	Acanthochromis_polyacanthus
ENSPREG00000004954	-	91	34.170	ENSACLG00000026879	-	90	33.983	Astatotilapia_calliptera
ENSPREG00000004954	-	99	49.507	ENSACLG00000013572	-	99	49.167	Astatotilapia_calliptera
ENSPREG00000004954	-	58	38.165	ENSACLG00000027730	-	75	38.165	Astatotilapia_calliptera
ENSPREG00000004954	-	94	33.932	ENSACLG00000024091	-	94	33.667	Astatotilapia_calliptera
ENSPREG00000004954	-	99	48.642	ENSACLG00000002180	-	99	48.642	Astatotilapia_calliptera
ENSPREG00000004954	-	50	38.743	ENSACLG00000008862	-	99	38.743	Astatotilapia_calliptera
ENSPREG00000004954	-	72	39.638	ENSACLG00000014619	-	74	39.638	Astatotilapia_calliptera
ENSPREG00000004954	-	100	51.873	ENSACLG00000017808	-	99	51.436	Astatotilapia_calliptera
ENSPREG00000004954	-	63	58.152	ENSACLG00000018181	-	99	58.152	Astatotilapia_calliptera
ENSPREG00000004954	-	57	38.222	ENSACLG00000010042	-	69	38.222	Astatotilapia_calliptera
ENSPREG00000004954	-	94	34.065	ENSACLG00000025719	-	94	33.800	Astatotilapia_calliptera
ENSPREG00000004954	-	94	33.932	ENSACLG00000009628	-	94	33.667	Astatotilapia_calliptera
ENSPREG00000004954	-	53	39.951	ENSACLG00000007343	-	97	40.196	Astatotilapia_calliptera
ENSPREG00000004954	-	97	57.778	ENSACLG00000018060	-	99	57.778	Astatotilapia_calliptera
ENSPREG00000004954	-	90	35.223	ENSACLG00000017161	-	88	35.152	Astatotilapia_calliptera
ENSPREG00000004954	-	72	39.638	ENSACLG00000019876	-	74	39.638	Astatotilapia_calliptera
ENSPREG00000004954	-	100	51.810	ENSACLG00000000499	-	99	51.373	Astatotilapia_calliptera
ENSPREG00000004954	-	100	51.873	ENSACLG00000014870	-	99	51.436	Astatotilapia_calliptera
ENSPREG00000004954	-	99	51.866	ENSACLG00000027291	-	99	51.366	Astatotilapia_calliptera
ENSPREG00000004954	-	89	51.659	ENSAMXG00000038578	-	99	51.232	Astyanax_mexicanus
ENSPREG00000004954	-	50	57.143	ENSAMXG00000043892	-	95	57.106	Astyanax_mexicanus
ENSPREG00000004954	-	70	43.997	ENSAMXG00000041112	-	94	45.126	Astyanax_mexicanus
ENSPREG00000004954	-	58	38.618	ENSAMXG00000038169	-	67	39.071	Astyanax_mexicanus
ENSPREG00000004954	-	99	50.122	ENSAMXG00000031698	-	99	49.573	Astyanax_mexicanus
ENSPREG00000004954	-	96	51.143	ENSAMXG00000040892	-	95	50.515	Astyanax_mexicanus
ENSPREG00000004954	-	69	35.932	ENSAMXG00000030987	-	70	36.415	Astyanax_mexicanus
ENSPREG00000004954	-	92	49.563	ENSAMXG00000030902	-	99	49.291	Astyanax_mexicanus
ENSPREG00000004954	-	56	36.554	ENSCPBG00000011626	-	99	36.554	Chrysemys_picta_bellii
ENSPREG00000004954	-	53	87.255	ENSCVAG00000009912	-	99	86.978	Cyprinodon_variegatus
ENSPREG00000004954	-	74	54.443	ENSELUG00000000948	-	96	54.047	Esox_lucius
ENSPREG00000004954	-	50	39.689	ENSGAFG00000009062	-	98	39.610	Gambusia_affinis
ENSPREG00000004954	-	95	31.548	ENSGAGG00000022240	-	86	38.883	Gopherus_agassizii
ENSPREG00000004954	-	55	38.981	ENSGAGG00000012039	-	99	38.981	Gopherus_agassizii
ENSPREG00000004954	-	55	38.981	ENSGAGG00000020521	-	99	38.981	Gopherus_agassizii
ENSPREG00000004954	-	73	32.368	ENSGAGG00000025282	-	87	37.345	Gopherus_agassizii
ENSPREG00000004954	-	59	39.912	ENSGAGG00000014450	-	79	40.000	Gopherus_agassizii
ENSPREG00000004954	-	57	37.313	ENSIPUG00000000601	-	93	37.084	Ictalurus_punctatus
ENSPREG00000004954	-	52	39.317	ENSMAMG00000012310	-	99	38.981	Mastacembelus_armatus
ENSPREG00000004954	-	70	53.412	ENSMAMG00000018393	-	100	52.968	Mastacembelus_armatus
ENSPREG00000004954	-	70	55.586	ENSMZEG00005000633	-	99	55.597	Maylandia_zebra
ENSPREG00000004954	-	99	49.282	ENSORLG00000026873	-	99	48.447	Oryzias_latipes
ENSPREG00000004954	-	73	37.838	ENSORLG00000027831	-	80	37.725	Oryzias_latipes
ENSPREG00000004954	-	92	33.402	ENSORLG00000026665	-	77	39.343	Oryzias_latipes
ENSPREG00000004954	-	90	33.924	ENSORLG00000026546	-	88	33.758	Oryzias_latipes
ENSPREG00000004954	-	87	32.768	ENSORLG00000022369	-	92	32.389	Oryzias_latipes
ENSPREG00000004954	-	63	56.037	ENSORLG00000026676	-	98	55.704	Oryzias_latipes
ENSPREG00000004954	-	99	49.188	ENSORLG00000023181	-	99	48.593	Oryzias_latipes
ENSPREG00000004954	-	91	34.344	ENSORLG00000030265	-	82	39.957	Oryzias_latipes
ENSPREG00000004954	-	91	34.605	ENSORLG00000024220	-	88	34.248	Oryzias_latipes
ENSPREG00000004954	-	93	33.196	ENSORLG00000028609	-	93	32.837	Oryzias_latipes
ENSPREG00000004954	-	91	34.575	ENSORLG00000027568	-	75	39.957	Oryzias_latipes
ENSPREG00000004954	-	51	40.409	ENSORLG00000025478	-	97	40.409	Oryzias_latipes
ENSPREG00000004954	-	71	57.784	ENSORLG00000028632	-	99	56.960	Oryzias_latipes
ENSPREG00000004954	-	93	33.196	ENSORLG00000030542	-	93	32.837	Oryzias_latipes
ENSPREG00000004954	-	92	32.260	ENSORLG00000024904	-	91	32.145	Oryzias_latipes
ENSPREG00000004954	-	99	49.094	ENSORLG00000026629	-	99	48.405	Oryzias_latipes
ENSPREG00000004954	-	99	48.791	ENSORLG00000029675	-	99	48.817	Oryzias_latipes
ENSPREG00000004954	-	92	33.610	ENSORLG00000024233	-	91	33.495	Oryzias_latipes
ENSPREG00000004954	-	91	34.298	ENSORLG00000025739	-	82	39.957	Oryzias_latipes
ENSPREG00000004954	-	93	33.264	ENSORLG00000028795	-	93	32.972	Oryzias_latipes
ENSPREG00000004954	-	99	48.729	ENSORLG00000029874	-	99	48.630	Oryzias_latipes
ENSPREG00000004954	-	81	39.214	ENSORLG00020001422	-	80	39.043	Oryzias_latipes_hni
ENSPREG00000004954	-	91	34.485	ENSORLG00020008293	-	82	39.957	Oryzias_latipes_hni
ENSPREG00000004954	-	91	31.870	ENSORLG00020020268	-	90	31.754	Oryzias_latipes_hni
ENSPREG00000004954	-	92	32.260	ENSORLG00020014203	-	89	32.145	Oryzias_latipes_hni
ENSPREG00000004954	-	92	32.260	ENSORLG00020003869	-	89	32.145	Oryzias_latipes_hni
ENSPREG00000004954	-	93	33.265	ENSORLG00015018878	-	93	32.905	Oryzias_latipes_hsok
ENSPREG00000004954	-	93	33.402	ENSORLG00015017778	-	93	33.040	Oryzias_latipes_hsok
ENSPREG00000004954	-	93	33.908	ENSOMEG00000003712	-	93	33.743	Oryzias_melastigma
ENSPREG00000004954	-	95	50.101	ENSOMEG00000009987	-	95	49.933	Oryzias_melastigma
ENSPREG00000004954	-	55	37.485	ENSPSIG00000001658	-	94	37.720	Pelodiscus_sinensis
ENSPREG00000004954	-	58	38.514	ENSPSIG00000000353	-	74	38.514	Pelodiscus_sinensis
ENSPREG00000004954	-	51	36.573	ENSPSIG00000013781	-	100	36.573	Pelodiscus_sinensis
ENSPREG00000004954	-	72	39.885	ENSPSIG00000000994	-	79	39.885	Pelodiscus_sinensis
ENSPREG00000004954	-	88	32.610	ENSPSIG00000000767	-	82	37.578	Pelodiscus_sinensis
ENSPREG00000004954	-	91	33.169	ENSPSIG00000000489	-	94	33.356	Pelodiscus_sinensis
ENSPREG00000004954	-	81	32.556	ENSPMEG00000016355	-	73	37.097	Poecilia_mexicana
ENSPREG00000004954	-	53	39.681	ENSPMEG00000019585	-	99	39.312	Poecilia_mexicana
ENSPREG00000004954	-	83	33.079	ENSSDUG00000002460	-	99	32.702	Seriola_dumerili
ENSPREG00000004954	-	94	32.768	ENSXMAG00000026031	-	94	32.927	Xiphophorus_maculatus
ENSPREG00000004954	-	99	48.768	ENSXMAG00000023319	-	99	48.705	Xiphophorus_maculatus
ENSPREG00000004954	-	88	32.205	ENSXMAG00000030100	-	94	32.230	Xiphophorus_maculatus
ENSPREG00000004954	-	99	46.243	ENSXMAG00000026594	-	99	45.570	Xiphophorus_maculatus
ENSPREG00000004954	-	99	48.830	ENSXMAG00000021298	-	99	48.644	Xiphophorus_maculatus
ENSPREG00000004954	-	99	46.307	ENSXMAG00000021213	-	99	45.634	Xiphophorus_maculatus
ENSPREG00000004954	-	99	45.977	ENSXMAG00000023503	-	99	45.796	Xiphophorus_maculatus
ENSPREG00000004954	-	99	45.918	ENSXMAG00000023079	-	99	45.738	Xiphophorus_maculatus
ENSPREG00000004954	-	70	50.924	ENSXMAG00000030089	-	99	50.320	Xiphophorus_maculatus