EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005015 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7519 bases
Position: chrLG18:20719492-20727010
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007358	zf-C2H2	PF00096.26	1.9e-29	1	5
ENSPREP00000007358	zf-C2H2	PF00096.26	1.9e-29	2	5
ENSPREP00000007358	zf-C2H2	PF00096.26	1.9e-29	3	5
ENSPREP00000007358	zf-C2H2	PF00096.26	1.9e-29	4	5
ENSPREP00000007358	zf-C2H2	PF00096.26	1.9e-29	5	5
ENSPREP00000007319	zf-C2H2	PF00096.26	1.1e-23	1	4
ENSPREP00000007319	zf-C2H2	PF00096.26	1.1e-23	2	4
ENSPREP00000007319	zf-C2H2	PF00096.26	1.1e-23	3	4
ENSPREP00000007319	zf-C2H2	PF00096.26	1.1e-23	4	4
ENSPREP00000007402	zf-C2H2	PF00096.26	1.1e-17	1	3
ENSPREP00000007402	zf-C2H2	PF00096.26	1.1e-17	2	3
ENSPREP00000007402	zf-C2H2	PF00096.26	1.1e-17	3	3
ENSPREP00000007358	zf-met	PF12874.7	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007493	-	1173	-	ENSPREP00000007402	390 (aa)	-	-
ENSPRET00000007449	-	660	-	ENSPREP00000007358	219 (aa)	-	-
ENSPRET00000007411	-	756	-	ENSPREP00000007319	251 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005015	-	89	50.000	ENSPREG00000006461	-	99	41.379
ENSPREG00000005015	-	97	50.000	ENSPREG00000000449	-	64	50.000
ENSPREG00000005015	-	96	40.367	ENSPREG00000007135	-	64	45.324
ENSPREG00000005015	-	97	52.212	ENSPREG00000002664	-	99	54.194
ENSPREG00000005015	-	96	42.424	ENSPREG00000021718	gfi1b	53	44.037
ENSPREG00000005015	-	98	42.009	ENSPREG00000016270	-	89	47.205
ENSPREG00000005015	-	99	47.087	ENSPREG00000014127	-	95	44.262
ENSPREG00000005015	-	98	49.505	ENSPREG00000006537	-	98	48.649
ENSPREG00000005015	-	95	47.727	ENSPREG00000002637	-	96	50.000
ENSPREG00000005015	-	98	47.977	ENSPREG00000001952	-	98	47.977
ENSPREG00000005015	-	100	46.009	ENSPREG00000013780	-	99	46.479
ENSPREG00000005015	-	98	41.546	ENSPREG00000019161	-	91	58.696
ENSPREG00000005015	-	97	37.281	ENSPREG00000007146	-	68	38.421
ENSPREG00000005015	-	97	57.627	ENSPREG00000002548	-	83	57.627
ENSPREG00000005015	-	96	51.675	ENSPREG00000020014	-	99	55.414
ENSPREG00000005015	-	99	53.333	ENSPREG00000013112	-	89	59.574
ENSPREG00000005015	-	94	46.354	ENSPREG00000006360	-	96	47.857
ENSPREG00000005015	-	95	60.000	ENSPREG00000011439	-	97	58.537
ENSPREG00000005015	-	99	55.970	ENSPREG00000001743	-	78	55.556
ENSPREG00000005015	-	96	37.915	ENSPREG00000021246	-	91	42.105
ENSPREG00000005015	-	97	50.246	ENSPREG00000001823	-	93	46.154
ENSPREG00000005015	-	98	52.252	ENSPREG00000002181	-	94	52.252
ENSPREG00000005015	-	97	47.328	ENSPREG00000014348	-	94	43.651
ENSPREG00000005015	-	97	49.065	ENSPREG00000015421	-	98	50.323
ENSPREG00000005015	-	98	43.478	ENSPREG00000017631	znf668	80	40.741
ENSPREG00000005015	-	95	50.355	ENSPREG00000016220	-	89	44.375
ENSPREG00000005015	-	97	58.621	ENSPREG00000013476	-	97	58.599
ENSPREG00000005015	-	95	41.346	ENSPREG00000015226	-	99	44.086
ENSPREG00000005015	-	95	45.033	ENSPREG00000003650	-	82	46.809
ENSPREG00000005015	-	99	54.206	ENSPREG00000003894	-	96	53.247
ENSPREG00000005015	-	98	59.346	ENSPREG00000004672	-	94	53.913
ENSPREG00000005015	-	96	44.059	ENSPREG00000002642	-	99	47.917
ENSPREG00000005015	-	95	50.000	ENSPREG00000000733	-	86	52.941
ENSPREG00000005015	-	95	43.860	ENSPREG00000023113	si:ch211-166g5.4	69	43.860
ENSPREG00000005015	-	99	40.909	ENSPREG00000001386	-	88	43.716
ENSPREG00000005015	-	98	42.697	ENSPREG00000021924	-	79	41.053
ENSPREG00000005015	-	90	63.291	ENSPREG00000003816	-	90	55.714
ENSPREG00000005015	-	98	53.043	ENSPREG00000001713	-	93	54.386
ENSPREG00000005015	-	98	66.667	ENSPREG00000014800	-	98	57.792
ENSPREG00000005015	-	96	47.368	ENSPREG00000014105	-	81	45.312
ENSPREG00000005015	-	95	52.500	ENSPREG00000009488	-	95	52.500
ENSPREG00000005015	-	97	35.047	ENSPREG00000014898	-	69	36.364
ENSPREG00000005015	-	96	47.899	ENSPREG00000015689	-	86	42.157
ENSPREG00000005015	-	97	47.642	ENSPREG00000014340	-	74	47.642
ENSPREG00000005015	-	89	33.636	ENSPREG00000008907	-	67	34.783
ENSPREG00000005015	-	98	52.083	ENSPREG00000001441	-	98	52.941
ENSPREG00000005015	-	95	59.574	ENSPREG00000014028	-	99	51.829
ENSPREG00000005015	-	96	44.712	ENSPREG00000003523	-	87	40.659
ENSPREG00000005015	-	93	36.029	ENSPREG00000018985	scrt1b	78	36.029
ENSPREG00000005015	-	96	49.239	ENSPREG00000000451	-	73	49.239
ENSPREG00000005015	-	94	48.826	ENSPREG00000013699	-	83	45.070
ENSPREG00000005015	-	97	45.161	ENSPREG00000003193	-	99	45.161
ENSPREG00000005015	-	96	50.235	ENSPREG00000019972	-	99	53.704
ENSPREG00000005015	-	95	39.831	ENSPREG00000008528	SNAI2	67	38.824
ENSPREG00000005015	-	96	52.830	ENSPREG00000021537	-	98	51.923
ENSPREG00000005015	-	95	45.283	ENSPREG00000013719	-	96	43.125
ENSPREG00000005015	-	97	41.566	ENSPREG00000016129	-	89	46.053
ENSPREG00000005015	-	98	40.323	ENSPREG00000016249	-	78	43.506
ENSPREG00000005015	-	98	57.843	ENSPREG00000015286	-	99	55.128
ENSPREG00000005015	-	97	44.134	ENSPREG00000000153	-	97	43.411
ENSPREG00000005015	-	97	49.246	ENSPREG00000014360	-	92	45.714
ENSPREG00000005015	-	95	40.719	ENSPREG00000005538	-	74	46.000
ENSPREG00000005015	-	94	49.138	ENSPREG00000016186	-	86	49.138
ENSPREG00000005015	-	99	42.012	ENSPREG00000018366	prdm5	85	43.671
ENSPREG00000005015	-	99	54.237	ENSPREG00000015017	-	100	53.409
ENSPREG00000005015	-	97	38.462	ENSPREG00000016858	ZNF319	95	35.784
ENSPREG00000005015	-	97	47.887	ENSPREG00000019990	-	89	53.846
ENSPREG00000005015	-	98	49.432	ENSPREG00000014373	-	99	47.020
ENSPREG00000005015	-	98	50.725	ENSPREG00000014945	-	99	50.725
ENSPREG00000005015	-	98	39.716	ENSPREG00000002582	-	79	39.310
ENSPREG00000005015	-	97	50.340	ENSPREG00000001774	-	99	41.509
ENSPREG00000005015	-	96	47.549	ENSPREG00000010437	-	79	47.668
ENSPREG00000005015	-	97	65.625	ENSPREG00000011741	-	96	57.055
ENSPREG00000005015	-	91	55.634	ENSPREG00000004725	-	82	49.123
ENSPREG00000005015	-	89	41.935	ENSPREG00000002603	-	89	41.935
ENSPREG00000005015	-	98	55.140	ENSPREG00000014477	-	95	53.302
ENSPREG00000005015	-	95	45.833	ENSPREG00000004006	-	72	44.286
ENSPREG00000005015	-	97	52.101	ENSPREG00000009372	-	95	47.552
ENSPREG00000005015	-	97	45.729	ENSPREG00000014330	-	92	47.742
ENSPREG00000005015	-	97	44.550	ENSPREG00000003483	-	94	49.057
ENSPREG00000005015	-	95	47.312	ENSPREG00000016593	-	79	46.053
ENSPREG00000005015	-	95	61.194	ENSPREG00000013154	-	96	61.194
ENSPREG00000005015	-	99	52.439	ENSPREG00000015342	-	99	52.439
ENSPREG00000005015	-	97	43.077	ENSPREG00000001514	zgc:113343	61	50.000
ENSPREG00000005015	-	96	47.619	ENSPREG00000000853	-	65	47.619
ENSPREG00000005015	-	98	51.598	ENSPREG00000004839	-	92	88.889
ENSPREG00000005015	-	95	50.000	ENSPREG00000002615	-	77	47.260
ENSPREG00000005015	-	95	40.541	ENSPREG00000007875	znf384l	56	43.478
ENSPREG00000005015	-	98	47.525	ENSPREG00000016308	-	96	43.590
ENSPREG00000005015	-	96	45.500	ENSPREG00000016144	-	95	45.161
ENSPREG00000005015	-	97	53.957	ENSPREG00000007431	-	99	60.000
ENSPREG00000005015	-	96	49.711	ENSPREG00000018011	-	93	48.810
ENSPREG00000005015	-	98	51.869	ENSPREG00000004745	-	81	51.869
ENSPREG00000005015	-	95	58.140	ENSPREG00000004746	-	99	58.140
ENSPREG00000005015	-	96	42.105	ENSPREG00000015132	-	80	39.610
ENSPREG00000005015	-	95	61.765	ENSPREG00000009495	-	93	52.326
ENSPREG00000005015	-	98	61.111	ENSPREG00000003614	-	99	59.677
ENSPREG00000005015	-	97	36.923	ENSPREG00000001101	znf319b	83	41.317
ENSPREG00000005015	-	97	48.624	ENSPREG00000017892	-	58	51.818
ENSPREG00000005015	-	96	52.764	ENSPREG00000000467	-	99	51.462
ENSPREG00000005015	-	99	50.704	ENSPREG00000014366	-	99	50.704
ENSPREG00000005015	-	96	50.000	ENSPREG00000013107	-	63	50.000
ENSPREG00000005015	-	96	47.222	ENSPREG00000015254	-	63	47.222
ENSPREG00000005015	-	97	43.256	ENSPREG00000003555	-	96	55.072
ENSPREG00000005015	-	96	50.935	ENSPREG00000000364	-	79	47.895
ENSPREG00000005015	-	97	48.000	ENSPREG00000013689	-	96	48.000
ENSPREG00000005015	-	97	48.113	ENSPREG00000010261	zbtb17	90	48.113
ENSPREG00000005015	-	96	48.344	ENSPREG00000019806	-	87	47.244
ENSPREG00000005015	-	97	45.078	ENSPREG00000013727	-	84	44.118
ENSPREG00000005015	-	96	62.000	ENSPREG00000004571	-	99	62.000
ENSPREG00000005015	-	95	32.367	ENSPREG00000016116	-	93	32.367
ENSPREG00000005015	-	95	65.625	ENSPREG00000012132	-	92	65.625
ENSPREG00000005015	-	95	56.566	ENSPREG00000008826	-	96	51.389
ENSPREG00000005015	-	95	46.860	ENSPREG00000013965	-	98	46.860
ENSPREG00000005015	-	89	56.716	ENSPREG00000004306	-	95	48.819
ENSPREG00000005015	-	95	39.130	ENSPREG00000020897	zbtb47b	52	39.130
ENSPREG00000005015	-	95	39.535	ENSPREG00000015352	-	70	43.382
ENSPREG00000005015	-	96	60.766	ENSPREG00000002681	-	97	54.194
ENSPREG00000005015	-	96	45.283	ENSPREG00000002696	-	95	45.946
ENSPREG00000005015	-	98	37.975	ENSPREG00000005852	zbtb41	54	39.535
ENSPREG00000005015	-	97	55.505	ENSPREG00000005144	-	99	55.906
ENSPREG00000005015	-	97	52.308	ENSPREG00000003393	-	99	49.342
ENSPREG00000005015	-	98	45.540	ENSPREG00000015081	-	91	47.418
ENSPREG00000005015	-	97	46.061	ENSPREG00000012539	-	90	47.368
ENSPREG00000005015	-	97	47.059	ENSPREG00000014851	-	81	46.835
ENSPREG00000005015	-	97	55.446	ENSPREG00000004728	-	83	52.353
ENSPREG00000005015	-	98	53.521	ENSPREG00000002715	-	98	50.000
ENSPREG00000005015	-	96	48.815	ENSPREG00000009121	-	85	45.902
ENSPREG00000005015	-	97	51.232	ENSPREG00000004036	-	90	54.545
ENSPREG00000005015	-	99	51.869	ENSPREG00000003217	-	91	51.934
ENSPREG00000005015	-	96	45.320	ENSPREG00000003213	-	90	43.114
ENSPREG00000005015	-	98	48.768	ENSPREG00000016204	-	77	43.871
ENSPREG00000005015	-	96	47.619	ENSPREG00000007997	GFI1	51	47.619
ENSPREG00000005015	-	96	45.283	ENSPREG00000015247	-	94	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005015	-	94	42.400	ENSACLG00000026130	-	52	44.048	Astatotilapia_calliptera
ENSPREG00000005015	-	96	56.522	ENSDARG00000104407	BX649453.1	91	48.634	Danio_rerio
ENSPREG00000005015	-	70	44.348	ENSDARG00000114793	CU182823.4	80	47.619	Danio_rerio
ENSPREG00000005015	-	54	51.299	ENSDARG00000103721	si:dkey-122c11.7	89	47.619	Danio_rerio
ENSPREG00000005015	-	94	52.632	ENSDARG00000091393	si:ch211-161m3.6	71	56.489	Danio_rerio
ENSPREG00000005015	-	97	51.961	ENSDARG00000116177	znf1127	90	51.961	Danio_rerio
ENSPREG00000005015	-	95	52.137	ENSDARG00000075417	zgc:175107	80	52.137	Danio_rerio
ENSPREG00000005015	-	97	51.613	ENSDARG00000105137	zgc:173705	89	51.613	Danio_rerio
ENSPREG00000005015	-	97	51.152	ENSDARG00000096189	si:dkey-54j5.2	89	51.152	Danio_rerio
ENSPREG00000005015	-	96	46.948	ENSDARG00000103244	CABZ01081752.3	87	46.948	Danio_rerio
ENSPREG00000005015	-	97	49.573	ENSDARG00000098901	CABZ01002768.1	91	47.778	Danio_rerio
ENSPREG00000005015	-	97	48.969	ENSDARG00000092938	znf1047	80	50.667	Danio_rerio
ENSPREG00000005015	-	97	48.848	ENSDARG00000102600	CABZ01003344.1	80	50.000	Danio_rerio
ENSPREG00000005015	-	97	53.623	ENSDARG00000100001	znf1096	92	49.171	Danio_rerio
ENSPREG00000005015	-	98	48.848	ENSDARG00000114437	zgc:173705	83	48.848	Danio_rerio
ENSPREG00000005015	-	96	52.941	ENSDARG00000116920	BX465848.2	88	52.941	Danio_rerio
ENSPREG00000005015	-	54	51.299	ENSDARG00000112103	si:dkey-16p19.1	82	48.810	Danio_rerio
ENSPREG00000005015	-	97	51.613	ENSDARG00000115450	CABZ01012382.1	89	51.613	Danio_rerio
ENSPREG00000005015	-	97	50.230	ENSDARG00000109381	CU457778.2	90	50.000	Danio_rerio
ENSPREG00000005015	-	98	48.848	ENSDARG00000103495	zgc:173714	90	48.848	Danio_rerio
ENSPREG00000005015	-	97	48.848	ENSDARG00000091994	znf1048	92	47.753	Danio_rerio
ENSPREG00000005015	-	97	48.259	ENSDARG00000091477	znf1066	92	49.153	Danio_rerio
ENSPREG00000005015	-	97	53.043	ENSDARG00000098986	znf1040	80	50.331	Danio_rerio
ENSPREG00000005015	-	71	50.658	ENSDARG00000102561	AL645691.1	89	47.977	Danio_rerio
ENSPREG00000005015	-	97	52.074	ENSDARG00000112725	si:dkey-22h13.2	90	50.000	Danio_rerio
ENSPREG00000005015	-	95	48.780	ENSFHEG00000020010	-	70	41.463	Fundulus_heteroclitus
ENSPREG00000005015	-	97	52.174	ENSFHEG00000021020	-	79	51.381	Fundulus_heteroclitus
ENSPREG00000005015	-	97	51.136	ENSGMOG00000020024	-	100	51.136	Gadus_morhua
ENSPREG00000005015	-	98	46.212	ENSKMAG00000014002	si:ch211-79k12.2	79	44.094	Kryptolebias_marmoratus
ENSPREG00000005015	-	94	40.367	ENSKMAG00000011441	-	84	39.416	Kryptolebias_marmoratus
ENSPREG00000005015	-	94	42.400	ENSMZEG00005006464	-	52	44.048	Maylandia_zebra
ENSPREG00000005015	-	89	43.802	ENSNBRG00000019881	-	51	37.273	Neolamprologus_brichardi
ENSPREG00000005015	-	95	52.239	ENSORLG00000024194	-	55	54.023	Oryzias_latipes
ENSPREG00000005015	-	94	43.216	ENSORLG00000012434	znf1064	79	39.583	Oryzias_latipes
ENSPREG00000005015	-	87	39.837	ENSORLG00015013828	-	58	33.155	Oryzias_latipes_hsok
ENSPREG00000005015	-	97	48.305	ENSOMEG00000005928	-	72	41.509	Oryzias_melastigma
ENSPREG00000005015	-	95	54.098	ENSPFOG00000023266	-	72	46.154	Poecilia_formosa
ENSPREG00000005015	-	97	50.467	ENSPFOG00000003366	-	96	48.780	Poecilia_formosa
ENSPREG00000005015	-	91	50.459	ENSPFOG00000005998	-	65	35.577	Poecilia_formosa
ENSPREG00000005015	-	98	49.289	ENSPFOG00000022423	-	94	50.658	Poecilia_formosa
ENSPREG00000005015	-	90	58.333	ENSPLAG00000009861	-	75	48.454	Poecilia_latipinna
ENSPREG00000005015	-	94	44.041	ENSPLAG00000010547	-	98	40.000	Poecilia_latipinna
ENSPREG00000005015	-	96	44.167	ENSPLAG00000001674	-	50	39.597	Poecilia_latipinna
ENSPREG00000005015	-	95	44.275	ENSPLAG00000023537	-	82	41.558	Poecilia_latipinna
ENSPREG00000005015	-	88	44.595	ENSTRUG00000022969	-	71	44.595	Takifugu_rubripes
ENSPREG00000005015	-	98	47.093	ENSXETG00000031310	-	99	45.161	Xenopus_tropicalis
ENSPREG00000005015	-	94	44.286	ENSXCOG00000015435	-	84	55.556	Xiphophorus_couchianus
ENSPREG00000005015	-	94	45.946	ENSXCOG00000003499	-	96	47.403	Xiphophorus_couchianus
ENSPREG00000005015	-	96	40.476	ENSXMAG00000024816	-	93	39.877	Xiphophorus_maculatus