EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1377 bases
Position: chrLG20:419147-420523
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007440	RVT_1	PF00078.27	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007531	-	1377	-	ENSPREP00000007440	458 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005117	-	93	94.118	ENSPREG00000006650	-	78	94.118
ENSPREG00000005117	-	93	34.014	ENSPREG00000006496	-	58	34.014
ENSPREG00000005117	-	93	89.882	ENSPREG00000006122	-	55	89.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005117	-	62	33.684	ENSAPOG00000008925	-	79	33.684	Acanthochromis_polyacanthus
ENSPREG00000005117	-	64	39.748	ENSAPEG00000006765	-	74	31.601	Amphiprion_percula
ENSPREG00000005117	-	89	31.757	ENSACLG00000012278	-	56	31.757	Astatotilapia_calliptera
ENSPREG00000005117	-	66	37.864	ENSACLG00000021935	-	94	37.864	Astatotilapia_calliptera
ENSPREG00000005117	-	66	38.065	ENSACLG00000006549	-	85	38.065	Astatotilapia_calliptera
ENSPREG00000005117	-	64	37.460	ENSACLG00000006798	-	100	37.460	Astatotilapia_calliptera
ENSPREG00000005117	-	81	30.481	ENSACLG00000001380	-	60	30.481	Astatotilapia_calliptera
ENSPREG00000005117	-	55	30.279	ENSACLG00000013847	-	57	30.279	Astatotilapia_calliptera
ENSPREG00000005117	-	82	64.752	ENSACLG00000020385	-	67	64.752	Astatotilapia_calliptera
ENSPREG00000005117	-	63	38.983	ENSACLG00000010403	-	95	38.983	Astatotilapia_calliptera
ENSPREG00000005117	-	93	35.455	ENSAMXG00000033197	-	59	35.682	Astyanax_mexicanus
ENSPREG00000005117	-	64	40.264	ENSAMXG00000043469	-	65	40.264	Astyanax_mexicanus
ENSPREG00000005117	-	94	31.643	ENSAMXG00000038480	-	69	31.643	Astyanax_mexicanus
ENSPREG00000005117	-	92	34.565	ENSAMXG00000041896	-	65	34.565	Astyanax_mexicanus
ENSPREG00000005117	-	66	34.641	ENSAMXG00000038502	-	62	34.641	Astyanax_mexicanus
ENSPREG00000005117	-	61	54.286	ENSAMXG00000029182	-	72	54.286	Astyanax_mexicanus
ENSPREG00000005117	-	56	30.469	ENSAMXG00000031032	-	67	30.469	Astyanax_mexicanus
ENSPREG00000005117	-	94	32.252	ENSAMXG00000030761	-	65	32.252	Astyanax_mexicanus
ENSPREG00000005117	-	93	37.723	ENSAMXG00000035923	-	57	37.723	Astyanax_mexicanus
ENSPREG00000005117	-	64	39.189	ENSCPBG00000001369	-	53	39.189	Chrysemys_picta_bellii
ENSPREG00000005117	-	59	40.659	ENSCPBG00000001687	-	91	40.659	Chrysemys_picta_bellii
ENSPREG00000005117	-	64	36.455	ENSCPBG00000001119	-	65	37.793	Chrysemys_picta_bellii
ENSPREG00000005117	-	76	43.164	ENSCVAG00000001415	-	100	43.164	Cyprinodon_variegatus
ENSPREG00000005117	-	65	30.233	ENSEBUG00000001810	-	79	30.233	Eptatretus_burgeri
ENSPREG00000005117	-	52	35.769	ENSGAFG00000008149	-	92	35.769	Gambusia_affinis
ENSPREG00000005117	-	81	34.301	ENSGAGG00000007173	-	55	34.301	Gopherus_agassizii
ENSPREG00000005117	-	64	41.554	ENSGAGG00000013650	-	53	41.554	Gopherus_agassizii
ENSPREG00000005117	-	54	36.400	ENSGAGG00000022000	-	89	36.400	Gopherus_agassizii
ENSPREG00000005117	-	59	40.659	ENSGAGG00000022131	-	91	40.659	Gopherus_agassizii
ENSPREG00000005117	-	61	32.982	ENSHBUG00000009088	-	77	32.982	Haplochromis_burtoni
ENSPREG00000005117	-	66	37.540	ENSHBUG00000016445	-	58	37.540	Haplochromis_burtoni
ENSPREG00000005117	-	66	34.853	ENSIPUG00000003645	-	63	34.853	Ictalurus_punctatus
ENSPREG00000005117	-	64	38.199	ENSKMAG00000010799	-	89	38.199	Kryptolebias_marmoratus
ENSPREG00000005117	-	64	33.670	ENSKMAG00000007574	-	58	33.670	Kryptolebias_marmoratus
ENSPREG00000005117	-	66	36.304	ENSLBEG00000003912	-	78	36.304	Labrus_bergylta
ENSPREG00000005117	-	91	30.822	ENSLACG00000008450	-	53	30.822	Latimeria_chalumnae
ENSPREG00000005117	-	64	34.884	ENSLACG00000001892	-	87	34.884	Latimeria_chalumnae
ENSPREG00000005117	-	57	30.855	ENSLACG00000002249	-	100	30.855	Latimeria_chalumnae
ENSPREG00000005117	-	95	31.707	ENSLACG00000012109	-	70	31.707	Latimeria_chalumnae
ENSPREG00000005117	-	81	33.158	ENSMAMG00000019918	-	57	33.158	Mastacembelus_armatus
ENSPREG00000005117	-	96	59.817	ENSMAMG00000021634	-	62	59.817	Mastacembelus_armatus
ENSPREG00000005117	-	89	58.191	ENSMAMG00000004646	-	85	58.191	Mastacembelus_armatus
ENSPREG00000005117	-	93	33.125	ENSMAMG00000016004	-	72	33.125	Mastacembelus_armatus
ENSPREG00000005117	-	96	60.046	ENSMZEG00005008378	-	57	60.046	Maylandia_zebra
ENSPREG00000005117	-	68	36.905	ENSMZEG00005017878	-	52	36.905	Maylandia_zebra
ENSPREG00000005117	-	50	34.199	ENSMALG00000020245	-	84	34.199	Monopterus_albus
ENSPREG00000005117	-	57	40.000	ENSMALG00000005075	-	81	40.000	Monopterus_albus
ENSPREG00000005117	-	60	38.869	ENSNBRG00000002791	-	92	38.869	Neolamprologus_brichardi
ENSPREG00000005117	-	64	33.784	ENSNBRG00000002477	-	87	33.784	Neolamprologus_brichardi
ENSPREG00000005117	-	55	40.392	ENSONIG00000018991	-	89	40.392	Oreochromis_niloticus
ENSPREG00000005117	-	93	31.809	ENSORLG00000029184	-	60	31.809	Oryzias_latipes
ENSPREG00000005117	-	64	33.445	ENSORLG00000027231	-	57	33.445	Oryzias_latipes
ENSPREG00000005117	-	93	33.542	ENSORLG00000025268	-	58	33.542	Oryzias_latipes
ENSPREG00000005117	-	62	32.982	ENSORLG00000027869	-	62	32.982	Oryzias_latipes
ENSPREG00000005117	-	92	31.568	ENSORLG00000024878	-	50	31.568	Oryzias_latipes
ENSPREG00000005117	-	80	34.204	ENSORLG00000022742	-	98	34.204	Oryzias_latipes
ENSPREG00000005117	-	80	38.211	ENSORLG00000022411	-	97	38.211	Oryzias_latipes
ENSPREG00000005117	-	52	34.874	ENSORLG00020000154	-	58	34.874	Oryzias_latipes_hni
ENSPREG00000005117	-	65	68.581	ENSORLG00020002705	-	93	68.581	Oryzias_latipes_hni
ENSPREG00000005117	-	58	45.113	ENSORLG00020021288	-	83	45.113	Oryzias_latipes_hni
ENSPREG00000005117	-	64	38.796	ENSORLG00020016924	-	71	38.796	Oryzias_latipes_hni
ENSPREG00000005117	-	64	33.220	ENSORLG00020012706	-	74	33.220	Oryzias_latipes_hni
ENSPREG00000005117	-	64	31.438	ENSORLG00020009127	-	57	31.438	Oryzias_latipes_hni
ENSPREG00000005117	-	85	33.088	ENSORLG00020004454	-	98	33.088	Oryzias_latipes_hni
ENSPREG00000005117	-	94	49.083	ENSORLG00020016695	-	57	49.083	Oryzias_latipes_hni
ENSPREG00000005117	-	99	31.343	ENSORLG00015000379	-	70	31.343	Oryzias_latipes_hsok
ENSPREG00000005117	-	54	35.628	ENSORLG00015021822	-	67	35.827	Oryzias_latipes_hsok
ENSPREG00000005117	-	93	46.934	ENSORLG00015013109	-	67	46.934	Oryzias_latipes_hsok
ENSPREG00000005117	-	52	35.565	ENSORLG00015009803	-	50	35.565	Oryzias_latipes_hsok
ENSPREG00000005117	-	64	36.486	ENSORLG00015008138	-	56	36.486	Oryzias_latipes_hsok
ENSPREG00000005117	-	93	50.000	ENSOMEG00000013479	-	68	50.000	Oryzias_melastigma
ENSPREG00000005117	-	61	39.858	ENSOMEG00000007764	-	96	39.858	Oryzias_melastigma
ENSPREG00000005117	-	89	30.067	ENSPKIG00000012990	-	65	30.512	Paramormyrops_kingsleyae
ENSPREG00000005117	-	64	31.438	ENSPKIG00000007140	-	68	31.438	Paramormyrops_kingsleyae
ENSPREG00000005117	-	94	33.263	ENSPKIG00000003982	-	92	33.263	Paramormyrops_kingsleyae
ENSPREG00000005117	-	64	33.445	ENSPKIG00000005406	-	50	33.445	Paramormyrops_kingsleyae
ENSPREG00000005117	-	89	35.123	ENSPKIG00000004057	-	99	35.123	Paramormyrops_kingsleyae
ENSPREG00000005117	-	63	40.550	ENSPSIG00000001249	-	84	40.550	Pelodiscus_sinensis
ENSPREG00000005117	-	52	40.249	ENSPSIG00000000367	-	55	40.249	Pelodiscus_sinensis
ENSPREG00000005117	-	66	40.717	ENSPSIG00000000193	-	61	40.717	Pelodiscus_sinensis
ENSPREG00000005117	-	60	42.086	ENSPSIG00000014032	-	82	42.086	Pelodiscus_sinensis
ENSPREG00000005117	-	51	34.043	ENSPSIG00000000007	-	54	34.043	Pelodiscus_sinensis
ENSPREG00000005117	-	64	44.068	ENSPSIG00000001205	-	64	44.068	Pelodiscus_sinensis
ENSPREG00000005117	-	62	37.024	ENSPSIG00000002033	-	88	37.024	Pelodiscus_sinensis
ENSPREG00000005117	-	52	41.909	ENSPSIG00000001800	-	54	41.909	Pelodiscus_sinensis
ENSPREG00000005117	-	58	40.449	ENSPSIG00000001816	-	100	40.449	Pelodiscus_sinensis
ENSPREG00000005117	-	64	41.156	ENSPSIG00000001757	-	72	41.156	Pelodiscus_sinensis
ENSPREG00000005117	-	64	43.919	ENSPSIG00000001197	-	73	43.919	Pelodiscus_sinensis
ENSPREG00000005117	-	64	42.295	ENSPSIG00000000226	-	58	42.345	Pelodiscus_sinensis
ENSPREG00000005117	-	62	31.359	ENSPMEG00000018862	-	58	31.359	Poecilia_mexicana
ENSPREG00000005117	-	75	34.000	ENSPMEG00000019465	-	72	34.000	Poecilia_mexicana
ENSPREG00000005117	-	81	33.069	ENSPNAG00000010299	-	69	33.069	Pygocentrus_nattereri
ENSPREG00000005117	-	65	35.738	ENSPNAG00000009058	-	61	35.738	Pygocentrus_nattereri
ENSPREG00000005117	-	56	32.296	ENSPNAG00000015949	-	66	32.296	Pygocentrus_nattereri
ENSPREG00000005117	-	79	61.111	ENSSFOG00015015399	-	99	61.111	Scleropages_formosus
ENSPREG00000005117	-	75	31.429	ENSSFOG00015016168	-	74	31.429	Scleropages_formosus
ENSPREG00000005117	-	75	36.104	ENSSFOG00015024061	-	62	35.294	Scleropages_formosus
ENSPREG00000005117	-	56	35.521	ENSTRUG00000024970	-	84	35.521	Takifugu_rubripes
ENSPREG00000005117	-	66	37.582	ENSXMAG00000023507	-	59	37.582	Xiphophorus_maculatus
ENSPREG00000005117	-	89	30.414	ENSXMAG00000025957	-	67	30.414	Xiphophorus_maculatus
ENSPREG00000005117	-	59	38.014	ENSXMAG00000027711	-	87	38.014	Xiphophorus_maculatus