EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005195 (Gene tree)
Gene ID: 103472315
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 21317 bases
Position: chrLG11:12917856-12939172
Accession: 103472315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	1	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	2	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	3	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	4	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	5	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	6	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	7	8
ENSPREP00000007653	PUF	PF00806.19	1.5e-71	8	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	1	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	2	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	3	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	4	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	5	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	6	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	7	8
ENSPREP00000007617	PUF	PF00806.19	8.1e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007709	-	3503	XM_008421843	ENSPREP00000007617	1163 (aa)	XP_008420065	UPI0004A46FC5
ENSPRET00000007745	-	2793	-	ENSPREP00000007653	930 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005195	pum1	100	81.166	ENSG00000134644	PUM1	100	80.941	Homo_sapiens
ENSPREG00000005195	pum1	100	98.305	ENSAPOG00000021632	pum1	100	98.108	Acanthochromis_polyacanthus
ENSPREG00000005195	pum1	100	80.895	ENSAMEG00000017656	PUM1	97	74.380	Ailuropoda_melanoleuca
ENSPREG00000005195	pum1	100	97.334	ENSACIG00000021013	pum1	100	97.334	Amphilophus_citrinellus
ENSPREG00000005195	pum1	100	98.305	ENSAOCG00000003944	pum1	100	98.108	Amphiprion_ocellaris
ENSPREG00000005195	pum1	100	98.305	ENSAPEG00000014550	pum1	100	98.108	Amphiprion_percula
ENSPREG00000005195	pum1	100	98.305	ENSATEG00000016004	pum1	100	98.072	Anabas_testudineus
ENSPREG00000005195	pum1	100	81.598	ENSAPLG00000009351	PUM1	100	74.938	Anas_platyrhynchos
ENSPREG00000005195	pum1	100	80.923	ENSACAG00000000682	PUM1	98	76.242	Anolis_carolinensis
ENSPREG00000005195	pum1	100	80.947	ENSANAG00000027865	PUM1	100	80.817	Aotus_nancymaae
ENSPREG00000005195	pum1	92	97.653	ENSACLG00000019354	pum1	100	97.653	Astatotilapia_calliptera
ENSPREG00000005195	pum1	100	85.049	ENSAMXG00000020607	pum1	96	81.949	Astyanax_mexicanus
ENSPREG00000005195	pum1	100	81.409	ENSBTAG00000018979	PUM1	100	81.088	Bos_taurus
ENSPREG00000005195	pum1	100	81.189	ENSCJAG00000006035	PUM1	100	80.941	Callithrix_jacchus
ENSPREG00000005195	pum1	100	79.344	ENSCAFG00000011205	PUM1	57	88.023	Canis_familiaris
ENSPREG00000005195	pum1	91	81.091	ENSCAFG00020024616	PUM1	98	79.181	Canis_lupus_dingo
ENSPREG00000005195	pum1	100	81.409	ENSCHIG00000012952	PUM1	100	76.722	Capra_hircus
ENSPREG00000005195	pum1	100	80.751	ENSTSYG00000008868	PUM1	100	81.928	Carlito_syrichta
ENSPREG00000005195	pum1	100	80.630	ENSCPOG00000031613	PUM1	100	80.693	Cavia_porcellus
ENSPREG00000005195	pum1	94	90.843	ENSCATG00000017991	PUM1	93	91.325	Cercocebus_atys
ENSPREG00000005195	pum1	100	80.630	ENSCLAG00000007662	PUM1	100	80.693	Chinchilla_lanigera
ENSPREG00000005195	pum1	100	79.331	ENSCSAG00000001028	PUM1	100	73.361	Chlorocebus_sabaeus
ENSPREG00000005195	pum1	91	68.098	ENSCHOG00000010245	PUM1	93	65.459	Choloepus_hoffmanni
ENSPREG00000005195	pum1	100	80.727	ENSCPBG00000009288	PUM1	100	81.312	Chrysemys_picta_bellii
ENSPREG00000005195	pum1	100	80.970	ENSCANG00000042606	PUM1	100	80.941	Colobus_angolensis_palliatus
ENSPREG00000005195	pum1	100	80.900	ENSCGRG00001024949	Pum1	100	82.571	Cricetulus_griseus_chok1gshd
ENSPREG00000005195	pum1	100	80.900	ENSCGRG00000014197	Pum1	100	82.571	Cricetulus_griseus_crigri
ENSPREG00000005195	pum1	92	95.689	ENSCSEG00000015981	pum1	100	95.689	Cynoglossus_semilaevis
ENSPREG00000005195	pum1	100	98.305	ENSCVAG00000007043	pum1	100	98.194	Cyprinodon_variegatus
ENSPREG00000005195	pum1	100	86.903	ENSDARG00000099256	pum1	100	80.541	Danio_rerio
ENSPREG00000005195	pum1	100	81.477	ENSDNOG00000010939	PUM1	100	74.773	Dasypus_novemcinctus
ENSPREG00000005195	pum1	90	72.526	ENSETEG00000004355	PUM1	87	71.415	Echinops_telfairi
ENSPREG00000005195	pum1	100	81.091	ENSEASG00005010813	PUM1	100	74.421	Equus_asinus_asinus
ENSPREG00000005195	pum1	100	81.091	ENSECAG00000021369	PUM1	100	74.276	Equus_caballus
ENSPREG00000005195	pum1	79	89.556	ENSEEUG00000003871	PUM1	74	90.444	Erinaceus_europaeus
ENSPREG00000005195	pum1	100	90.678	ENSELUG00000002409	pum1	100	90.678	Esox_lucius
ENSPREG00000005195	pum1	100	81.039	ENSFCAG00000010374	PUM1	100	81.064	Felis_catus
ENSPREG00000005195	pum1	100	81.107	ENSFALG00000001214	PUM1	97	74.794	Ficedula_albicollis
ENSPREG00000005195	pum1	100	80.630	ENSFDAG00000011319	PUM1	100	80.693	Fukomys_damarensis
ENSPREG00000005195	pum1	100	90.444	ENSGMOG00000010491	pum1	100	91.297	Gadus_morhua
ENSPREG00000005195	pum1	96	89.940	ENSGALG00000042598	PUM1	99	89.940	Gallus_gallus
ENSPREG00000005195	pum1	100	99.398	ENSGAFG00000015617	pum1	100	99.398	Gambusia_affinis
ENSPREG00000005195	pum1	99	95.948	ENSGACG00000005717	pum1	100	95.690	Gasterosteus_aculeatus
ENSPREG00000005195	pum1	96	90.141	ENSGAGG00000001290	PUM1	99	90.141	Gopherus_agassizii
ENSPREG00000005195	pum1	100	80.970	ENSGGOG00000011983	PUM1	100	80.941	Gorilla_gorilla
ENSPREG00000005195	pum1	100	98.305	ENSHBUG00000018718	pum1	100	97.936	Haplochromis_burtoni
ENSPREG00000005195	pum1	100	80.606	ENSHGLG00000013819	Pum1	100	80.569	Heterocephalus_glaber_female
ENSPREG00000005195	pum1	100	80.606	ENSHGLG00100008621	Pum1	100	80.569	Heterocephalus_glaber_male
ENSPREG00000005195	pum1	92	90.338	ENSHCOG00000005149	pum1	100	89.024	Hippocampus_comes
ENSPREG00000005195	pum1	100	86.148	ENSIPUG00000020421	pum1	100	80.488	Ictalurus_punctatus
ENSPREG00000005195	pum1	100	80.970	ENSSTOG00000010757	PUM1	100	80.941	Ictidomys_tridecemlineatus
ENSPREG00000005195	pum1	100	80.727	ENSJJAG00000000530	Pum1	100	80.693	Jaculus_jaculus
ENSPREG00000005195	pum1	100	97.936	ENSKMAG00000003481	pum1	100	97.936	Kryptolebias_marmoratus
ENSPREG00000005195	pum1	100	97.458	ENSLBEG00000002527	pum1	100	96.819	Labrus_bergylta
ENSPREG00000005195	pum1	100	78.890	ENSLACG00000017188	PUM1	99	73.013	Latimeria_chalumnae
ENSPREG00000005195	pum1	100	85.749	ENSLOCG00000005210	pum1	99	81.250	Lepisosteus_oculatus
ENSPREG00000005195	pum1	100	80.872	ENSLAFG00000003178	PUM1	100	74.752	Loxodonta_africana
ENSPREG00000005195	pum1	100	80.727	ENSMFAG00000010291	PUM1	100	80.941	Macaca_fascicularis
ENSPREG00000005195	pum1	100	80.727	ENSMMUG00000013520	PUM1	100	80.941	Macaca_mulatta
ENSPREG00000005195	pum1	100	80.970	ENSMNEG00000034639	PUM1	100	80.941	Macaca_nemestrina
ENSPREG00000005195	pum1	100	80.970	ENSMLEG00000038743	PUM1	100	80.941	Mandrillus_leucophaeus
ENSPREG00000005195	pum1	100	97.458	ENSMAMG00000011606	pum1	100	97.248	Mastacembelus_armatus
ENSPREG00000005195	pum1	100	98.305	ENSMZEG00005005834	pum1	100	97.936	Maylandia_zebra
ENSPREG00000005195	pum1	100	81.818	ENSMGAG00000000724	PUM1	100	77.557	Meleagris_gallopavo
ENSPREG00000005195	pum1	100	80.680	ENSMAUG00000022090	Pum1	100	82.797	Mesocricetus_auratus
ENSPREG00000005195	pum1	94	89.423	ENSMICG00000012213	-	99	72.720	Microcebus_murinus
ENSPREG00000005195	pum1	100	80.848	ENSMICG00000007713	-	100	80.817	Microcebus_murinus
ENSPREG00000005195	pum1	100	80.704	ENSMOCG00000015463	Pum1	100	82.571	Microtus_ochrogaster
ENSPREG00000005195	pum1	92	97.349	ENSMMOG00000019817	pum1	100	71.667	Mola_mola
ENSPREG00000005195	pum1	100	80.387	ENSMODG00000017067	PUM1	100	74.523	Monodelphis_domestica
ENSPREG00000005195	pum1	85	98.072	ENSMALG00000016399	pum1	100	98.072	Monopterus_albus
ENSPREG00000005195	pum1	100	80.437	MGP_CAROLIEiJ_G0026549	Pum1	100	80.569	Mus_caroli
ENSPREG00000005195	pum1	100	80.316	ENSMUSG00000028580	Pum1	100	80.446	Mus_musculus
ENSPREG00000005195	pum1	100	80.316	MGP_PahariEiJ_G0028881	Pum1	100	80.446	Mus_pahari
ENSPREG00000005195	pum1	100	80.194	MGP_SPRETEiJ_G0027529	Pum1	100	80.322	Mus_spretus
ENSPREG00000005195	pum1	100	81.212	ENSMPUG00000015454	PUM1	100	74.421	Mustela_putorius_furo
ENSPREG00000005195	pum1	100	81.189	ENSMLUG00000006490	PUM1	100	74.194	Myotis_lucifugus
ENSPREG00000005195	pum1	100	80.970	ENSNGAG00000002378	Pum1	100	80.941	Nannospalax_galili
ENSPREG00000005195	pum1	100	95.638	ENSNBRG00000010689	pum1	100	98.500	Neolamprologus_brichardi
ENSPREG00000005195	pum1	100	79.394	ENSNLEG00000001151	PUM1	100	79.455	Nomascus_leucogenys
ENSPREG00000005195	pum1	75	77.759	ENSMEUG00000000976	-	67	80.228	Notamacropus_eugenii
ENSPREG00000005195	pum1	82	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSPREG00000005195	pum1	100	80.727	ENSODEG00000003465	PUM1	100	80.693	Octodon_degus
ENSPREG00000005195	pum1	100	98.305	ENSONIG00000002290	pum1	100	98.108	Oreochromis_niloticus
ENSPREG00000005195	pum1	83	66.928	ENSOANG00000004902	-	100	61.274	Ornithorhynchus_anatinus
ENSPREG00000005195	pum1	99	81.144	ENSOCUG00000008641	PUM1	99	74.316	Oryctolagus_cuniculus
ENSPREG00000005195	pum1	100	97.458	ENSORLG00000011482	pum1	100	96.915	Oryzias_latipes
ENSPREG00000005195	pum1	100	97.458	ENSORLG00020019461	pum1	100	96.915	Oryzias_latipes_hni
ENSPREG00000005195	pum1	100	96.915	ENSORLG00015011375	pum1	100	96.915	Oryzias_latipes_hsok
ENSPREG00000005195	pum1	100	76.932	ENSOGAG00000011063	PUM1	100	71.867	Otolemur_garnettii
ENSPREG00000005195	pum1	100	80.024	ENSOARG00000001899	PUM1	100	73.863	Ovis_aries
ENSPREG00000005195	pum1	100	80.970	ENSPPAG00000044003	PUM1	100	80.941	Pan_paniscus
ENSPREG00000005195	pum1	100	81.189	ENSPPRG00000001370	PUM1	100	81.064	Panthera_pardus
ENSPREG00000005195	pum1	100	80.947	ENSPTIG00000010798	PUM1	100	81.064	Panthera_tigris_altaica
ENSPREG00000005195	pum1	100	80.970	ENSPTRG00000000453	PUM1	100	80.941	Pan_troglodytes
ENSPREG00000005195	pum1	100	80.970	ENSPANG00000016338	PUM1	100	80.941	Papio_anubis
ENSPREG00000005195	pum1	95	92.771	ENSPKIG00000010578	pum1	100	77.935	Paramormyrops_kingsleyae
ENSPREG00000005195	pum1	100	81.917	ENSPSIG00000014118	PUM1	100	75.083	Pelodiscus_sinensis
ENSPREG00000005195	pum1	100	94.136	ENSPMGG00000005836	pum1	100	97.458	Periophthalmus_magnuspinnatus
ENSPREG00000005195	pum1	100	80.680	ENSPEMG00000010009	Pum1	100	82.797	Peromyscus_maniculatus_bairdii
ENSPREG00000005195	pum1	100	80.387	ENSPCIG00000014151	PUM1	100	80.841	Phascolarctos_cinereus
ENSPREG00000005195	pum1	94	100.000	ENSPFOG00000007289	pum1	99	98.765	Poecilia_formosa
ENSPREG00000005195	pum1	100	100.000	ENSPLAG00000007256	pum1	100	99.048	Poecilia_latipinna
ENSPREG00000005195	pum1	92	100.000	ENSPMEG00000019543	pum1	99	98.693	Poecilia_mexicana
ENSPREG00000005195	pum1	100	80.970	ENSPPYG00000001621	PUM1	100	73.052	Pongo_abelii
ENSPREG00000005195	pum1	81	91.975	ENSPCAG00000001979	PUM1	73	92.593	Procavia_capensis
ENSPREG00000005195	pum1	100	80.848	ENSPCOG00000004398	PUM1	100	80.817	Propithecus_coquereli
ENSPREG00000005195	pum1	100	78.303	ENSPVAG00000005207	PUM1	97	72.659	Pteropus_vampyrus
ENSPREG00000005195	pum1	100	98.305	ENSPNYG00000009518	pum1	100	98.022	Pundamilia_nyererei
ENSPREG00000005195	pum1	100	87.990	ENSPNAG00000026728	pum1	100	82.075	Pygocentrus_nattereri
ENSPREG00000005195	pum1	100	80.923	ENSRNOG00000011709	Pum1	100	74.089	Rattus_norvegicus
ENSPREG00000005195	pum1	100	80.970	ENSRBIG00000042521	PUM1	100	80.941	Rhinopithecus_bieti
ENSPREG00000005195	pum1	100	81.166	ENSRROG00000020156	PUM1	100	80.941	Rhinopithecus_roxellana
ENSPREG00000005195	pum1	100	80.872	ENSSBOG00000032037	PUM1	100	80.941	Saimiri_boliviensis_boliviensis
ENSPREG00000005195	pum1	100	80.387	ENSSHAG00000010918	PUM1	100	74.689	Sarcophilus_harrisii
ENSPREG00000005195	pum1	100	96.733	ENSSMAG00000010918	pum1	100	98.072	Scophthalmus_maximus
ENSPREG00000005195	pum1	100	98.022	ENSSDUG00000009021	pum1	100	98.022	Seriola_dumerili
ENSPREG00000005195	pum1	100	97.458	ENSSLDG00000009667	pum1	100	98.201	Seriola_lalandi_dorsalis
ENSPREG00000005195	pum1	97	80.803	ENSSARG00000003055	PUM1	90	78.305	Sorex_araneus
ENSPREG00000005195	pum1	100	81.576	ENSSPUG00000006267	PUM1	100	74.917	Sphenodon_punctatus
ENSPREG00000005195	pum1	100	98.305	ENSSPAG00000016636	pum1	100	98.194	Stegastes_partitus
ENSPREG00000005195	pum1	100	88.531	ENSSSCG00000003591	PUM1	95	88.934	Sus_scrofa
ENSPREG00000005195	pum1	100	97.077	ENSTRUG00000013121	pum1	100	98.375	Takifugu_rubripes
ENSPREG00000005195	pum1	100	95.983	ENSTNIG00000016983	pum1	99	95.983	Tetraodon_nigroviridis
ENSPREG00000005195	pum1	87	89.024	ENSTBEG00000013810	PUM1	89	89.024	Tupaia_belangeri
ENSPREG00000005195	pum1	91	86.842	ENSTTRG00000007436	PUM1	88	76.937	Tursiops_truncatus
ENSPREG00000005195	pum1	98	79.416	ENSUAMG00000018262	-	100	72.464	Ursus_americanus
ENSPREG00000005195	pum1	57	90.361	ENSUMAG00000009211	PUM1	57	91.325	Ursus_maritimus
ENSPREG00000005195	pum1	100	81.091	ENSVPAG00000005902	PUM1	92	81.436	Vicugna_pacos
ENSPREG00000005195	pum1	100	80.993	ENSVVUG00000014631	PUM1	100	76.642	Vulpes_vulpes
ENSPREG00000005195	pum1	100	76.513	ENSXETG00000012904	pum1	99	71.464	Xenopus_tropicalis
ENSPREG00000005195	pum1	100	99.153	ENSXMAG00000002945	pum1	100	98.836	Xiphophorus_maculatus