EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005246 (Gene tree)
Gene ID: 103474775
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7781 bases
Position: chrLG13:21474000-21481780
Accession: 103474775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007678	HARE-HTH	PF05066.13	8.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007770	-	2305	XM_008425991	ENSPREP00000007678	546 (aa)	XP_008424213	UPI0004A4A9CE

Gene Model

Click here to download ENSPREG00000005246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005246	tbrg1	100	83.883	ENSAPOG00000017352	tbrg1	100	83.883	Acanthochromis_polyacanthus
ENSPREG00000005246	tbrg1	92	79.921	ENSACIG00000021274	tbrg1	94	79.921	Amphilophus_citrinellus
ENSPREG00000005246	tbrg1	100	83.516	ENSAOCG00000018605	tbrg1	100	83.516	Amphiprion_ocellaris
ENSPREG00000005246	tbrg1	100	83.516	ENSAPEG00000022443	tbrg1	100	83.516	Amphiprion_percula
ENSPREG00000005246	tbrg1	100	83.060	ENSATEG00000023537	tbrg1	100	83.060	Anabas_testudineus
ENSPREG00000005246	tbrg1	100	82.332	ENSACLG00000000281	tbrg1	100	82.332	Astatotilapia_calliptera
ENSPREG00000005246	tbrg1	97	67.712	ENSAMXG00000008381	tbrg1	91	70.138	Astyanax_mexicanus
ENSPREG00000005246	tbrg1	100	80.182	ENSCSEG00000002445	tbrg1	100	79.417	Cynoglossus_semilaevis
ENSPREG00000005246	tbrg1	100	90.476	ENSCVAG00000019626	tbrg1	100	89.377	Cyprinodon_variegatus
ENSPREG00000005246	tbrg1	94	70.312	ENSDARG00000074996	tbrg1	93	70.703	Danio_rerio
ENSPREG00000005246	tbrg1	91	47.835	ENSEBUG00000014060	tbrg1	90	47.151	Eptatretus_burgeri
ENSPREG00000005246	tbrg1	99	73.866	ENSELUG00000017458	tbrg1	99	73.866	Esox_lucius
ENSPREG00000005246	tbrg1	88	85.193	ENSFHEG00000004283	tbrg1	92	85.193	Fundulus_heteroclitus
ENSPREG00000005246	tbrg1	100	97.436	ENSGAFG00000000204	tbrg1	100	97.436	Gambusia_affinis
ENSPREG00000005246	tbrg1	100	82.332	ENSHBUG00000004935	tbrg1	100	82.332	Haplochromis_burtoni
ENSPREG00000005246	tbrg1	100	72.563	ENSHCOG00000010588	tbrg1	100	72.202	Hippocampus_comes
ENSPREG00000005246	tbrg1	93	70.039	ENSIPUG00000008697	tbrg1	93	69.620	Ictalurus_punctatus
ENSPREG00000005246	tbrg1	100	83.060	ENSKMAG00000002775	tbrg1	100	83.607	Kryptolebias_marmoratus
ENSPREG00000005246	tbrg1	99	81.536	ENSLBEG00000017559	tbrg1	94	82.515	Labrus_bergylta
ENSPREG00000005246	tbrg1	100	70.557	ENSLOCG00000003093	tbrg1	93	73.180	Lepisosteus_oculatus
ENSPREG00000005246	tbrg1	100	82.514	ENSMAMG00000000876	tbrg1	100	82.514	Mastacembelus_armatus
ENSPREG00000005246	tbrg1	100	82.332	ENSMZEG00005013545	tbrg1	92	82.332	Maylandia_zebra
ENSPREG00000005246	tbrg1	95	76.527	ENSMMOG00000005314	tbrg1	92	77.843	Mola_mola
ENSPREG00000005246	tbrg1	93	83.562	ENSMALG00000011630	tbrg1	99	83.562	Monopterus_albus
ENSPREG00000005246	tbrg1	98	81.262	ENSNBRG00000017490	tbrg1	100	81.262	Neolamprologus_brichardi
ENSPREG00000005246	tbrg1	100	82.514	ENSONIG00000005284	tbrg1	100	82.514	Oreochromis_niloticus
ENSPREG00000005246	tbrg1	100	78.689	ENSORLG00000014519	tbrg1	100	77.413	Oryzias_latipes
ENSPREG00000005246	tbrg1	100	77.778	ENSORLG00020009567	tbrg1	100	76.503	Oryzias_latipes_hni
ENSPREG00000005246	tbrg1	100	78.871	ENSORLG00015000448	tbrg1	100	77.596	Oryzias_latipes_hsok
ENSPREG00000005246	tbrg1	100	79.599	ENSOMEG00000006130	tbrg1	100	78.689	Oryzias_melastigma
ENSPREG00000005246	tbrg1	95	71.264	ENSPKIG00000012274	tbrg1	89	71.048	Paramormyrops_kingsleyae
ENSPREG00000005246	tbrg1	100	75.725	ENSPMGG00000015968	tbrg1	100	75.090	Periophthalmus_magnuspinnatus
ENSPREG00000005246	tbrg1	100	97.253	ENSPFOG00000004279	tbrg1	100	97.253	Poecilia_formosa
ENSPREG00000005246	tbrg1	100	97.619	ENSPLAG00000001227	tbrg1	100	97.619	Poecilia_latipinna
ENSPREG00000005246	tbrg1	100	97.070	ENSPMEG00000000955	tbrg1	100	97.070	Poecilia_mexicana
ENSPREG00000005246	tbrg1	88	81.289	ENSPNYG00000012625	tbrg1	100	81.289	Pundamilia_nyererei
ENSPREG00000005246	tbrg1	97	67.695	ENSPNAG00000028332	tbrg1	96	69.919	Pygocentrus_nattereri
ENSPREG00000005246	tbrg1	92	74.125	ENSSFOG00015009308	tbrg1	86	74.319	Scleropages_formosus
ENSPREG00000005246	tbrg1	100	80.586	ENSSMAG00000002529	tbrg1	100	80.586	Scophthalmus_maximus
ENSPREG00000005246	tbrg1	99	84.826	ENSSDUG00000013674	tbrg1	99	84.826	Seriola_dumerili
ENSPREG00000005246	tbrg1	93	83.527	ENSSLDG00000008932	tbrg1	98	83.527	Seriola_lalandi_dorsalis
ENSPREG00000005246	tbrg1	86	83.761	ENSSPAG00000004808	tbrg1	99	83.761	Stegastes_partitus
ENSPREG00000005246	tbrg1	95	76.775	ENSTRUG00000005960	tbrg1	98	76.967	Takifugu_rubripes
ENSPREG00000005246	tbrg1	100	96.886	ENSXMAG00000001551	tbrg1	100	96.886	Xiphophorus_maculatus