EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005285 (Gene tree)
Gene ID: 103477820
Gene Symbol: yrdc
Alias: -
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6722 bases
Position: chrLG16:8468284-8475005
Accession: 103477820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007749	Sua5_yciO_yrdC	PF01300.18	1.4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007841	-	804	XM_008431125	ENSPREP00000007749	267 (aa)	XP_008429347	UPI0004A2E90E

Gene Model

Click here to download ENSPREG00000005285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005285	yrdc	84	57.018	ENSG00000196449	YRDC	82	56.710	Homo_sapiens
ENSPREG00000005285	yrdc	100	77.528	ENSAPOG00000024293	yrdc	100	77.528	Acanthochromis_polyacanthus
ENSPREG00000005285	yrdc	67	62.295	ENSAMEG00000001173	YRDC	97	62.295	Ailuropoda_melanoleuca
ENSPREG00000005285	yrdc	98	79.693	ENSACIG00000017330	yrdc	98	79.693	Amphilophus_citrinellus
ENSPREG00000005285	yrdc	100	77.903	ENSAOCG00000021647	yrdc	100	77.903	Amphiprion_ocellaris
ENSPREG00000005285	yrdc	100	77.528	ENSAPEG00000006164	yrdc	100	77.528	Amphiprion_percula
ENSPREG00000005285	yrdc	99	75.564	ENSATEG00000010086	yrdc	100	75.564	Anabas_testudineus
ENSPREG00000005285	yrdc	71	62.371	ENSACAG00000017203	YRDC	99	59.330	Anolis_carolinensis
ENSPREG00000005285	yrdc	74	60.396	ENSANAG00000028788	-	86	60.396	Aotus_nancymaae
ENSPREG00000005285	yrdc	85	53.648	ENSANAG00000031052	-	84	53.648	Aotus_nancymaae
ENSPREG00000005285	yrdc	100	77.985	ENSACLG00000027775	yrdc	100	77.985	Astatotilapia_calliptera
ENSPREG00000005285	yrdc	91	68.033	ENSAMXG00000037791	yrdc	92	68.033	Astyanax_mexicanus
ENSPREG00000005285	yrdc	95	54.651	ENSBTAG00000006510	YRDC	92	54.651	Bos_taurus
ENSPREG00000005285	yrdc	81	34.259	WBGene00012997	Y48C3A.18	98	34.454	Caenorhabditis_elegans
ENSPREG00000005285	yrdc	97	51.894	ENSCJAG00000002078	YRDC	72	51.894	Callithrix_jacchus
ENSPREG00000005285	yrdc	91	54.032	ENSCAFG00000003253	YRDC	92	53.488	Canis_familiaris
ENSPREG00000005285	yrdc	84	56.332	ENSCAFG00020007843	YRDC	83	56.332	Canis_lupus_dingo
ENSPREG00000005285	yrdc	95	52.713	ENSCHIG00000007882	YRDC	92	52.713	Capra_hircus
ENSPREG00000005285	yrdc	62	61.176	ENSTSYG00000005555	YRDC	61	61.176	Carlito_syrichta
ENSPREG00000005285	yrdc	92	55.823	ENSCPOG00000036144	YRDC	88	55.823	Cavia_porcellus
ENSPREG00000005285	yrdc	97	51.515	ENSCCAG00000028891	YRDC	82	56.710	Cebus_capucinus
ENSPREG00000005285	yrdc	84	54.825	ENSCATG00000036928	YRDC	82	55.844	Cercocebus_atys
ENSPREG00000005285	yrdc	70	61.979	ENSCLAG00000015012	YRDC	88	53.414	Chinchilla_lanigera
ENSPREG00000005285	yrdc	84	54.825	ENSCSAG00000001116	YRDC	94	51.136	Chlorocebus_sabaeus
ENSPREG00000005285	yrdc	69	52.432	ENSCHOG00000005500	YRDC	88	52.432	Choloepus_hoffmanni
ENSPREG00000005285	yrdc	82	61.261	ENSCPBG00000018446	YRDC	95	61.261	Chrysemys_picta_bellii
ENSPREG00000005285	yrdc	75	49.765	ENSCING00000007564	-	98	49.765	Ciona_intestinalis
ENSPREG00000005285	yrdc	75	48.095	ENSCSAVG00000009982	-	98	48.095	Ciona_savignyi
ENSPREG00000005285	yrdc	84	54.825	ENSCANG00000031111	YRDC	94	51.136	Colobus_angolensis_palliatus
ENSPREG00000005285	yrdc	84	56.579	ENSCGRG00001014496	-	82	56.277	Cricetulus_griseus_chok1gshd
ENSPREG00000005285	yrdc	95	48.276	ENSCGRG00001000829	-	72	48.276	Cricetulus_griseus_chok1gshd
ENSPREG00000005285	yrdc	81	78.704	ENSCSEG00000019075	yrdc	79	78.704	Cynoglossus_semilaevis
ENSPREG00000005285	yrdc	100	83.146	ENSCVAG00000017355	yrdc	100	83.146	Cyprinodon_variegatus
ENSPREG00000005285	yrdc	88	68.376	ENSDARG00000041428	yrdc	98	68.376	Danio_rerio
ENSPREG00000005285	yrdc	70	44.330	ENSDNOG00000036198	-	94	44.330	Dasypus_novemcinctus
ENSPREG00000005285	yrdc	84	54.825	ENSDNOG00000038789	-	90	51.931	Dasypus_novemcinctus
ENSPREG00000005285	yrdc	69	62.963	ENSDORG00000008788	Yrdc	84	62.963	Dipodomys_ordii
ENSPREG00000005285	yrdc	76	46.890	FBgn0061361	CG33786	84	46.890	Drosophila_melanogaster
ENSPREG00000005285	yrdc	95	42.146	ENSETEG00000003442	YRDC	93	42.146	Echinops_telfairi
ENSPREG00000005285	yrdc	88	48.085	ENSEBUG00000014080	yrdc	99	48.085	Eptatretus_burgeri
ENSPREG00000005285	yrdc	75	61.951	ENSEASG00005012253	YRDC	88	55.020	Equus_asinus_asinus
ENSPREG00000005285	yrdc	84	58.333	ENSECAG00000022522	YRDC	88	55.422	Equus_caballus
ENSPREG00000005285	yrdc	100	66.052	ENSELUG00000018071	yrdc	89	66.052	Esox_lucius
ENSPREG00000005285	yrdc	84	56.579	ENSFCAG00000011018	YRDC	82	56.277	Felis_catus
ENSPREG00000005285	yrdc	71	64.767	ENSFALG00000000964	YRDC	90	63.959	Ficedula_albicollis
ENSPREG00000005285	yrdc	100	86.142	ENSFHEG00000001029	yrdc	99	86.531	Fundulus_heteroclitus
ENSPREG00000005285	yrdc	77	78.049	ENSGMOG00000015635	yrdc	99	78.049	Gadus_morhua
ENSPREG00000005285	yrdc	77	62.201	ENSGALG00000029001	YRDC	82	62.201	Gallus_gallus
ENSPREG00000005285	yrdc	100	95.131	ENSGAFG00000008396	yrdc	100	95.131	Gambusia_affinis
ENSPREG00000005285	yrdc	87	77.637	ENSGACG00000013878	yrdc	98	77.637	Gasterosteus_aculeatus
ENSPREG00000005285	yrdc	80	61.927	ENSGAGG00000014968	YRDC	94	61.927	Gopherus_agassizii
ENSPREG00000005285	yrdc	84	57.018	ENSGGOG00000007619	YRDC	82	56.710	Gorilla_gorilla
ENSPREG00000005285	yrdc	100	77.612	ENSHBUG00000009298	yrdc	100	77.612	Haplochromis_burtoni
ENSPREG00000005285	yrdc	92	55.020	ENSHGLG00000014075	YRDC	88	55.020	Heterocephalus_glaber_female
ENSPREG00000005285	yrdc	74	61.386	ENSHGLG00100002734	YRDC	73	61.386	Heterocephalus_glaber_male
ENSPREG00000005285	yrdc	98	64.751	ENSHCOG00000006598	yrdc	98	64.751	Hippocampus_comes
ENSPREG00000005285	yrdc	88	69.362	ENSIPUG00000014985	yrdc	97	69.362	Ictalurus_punctatus
ENSPREG00000005285	yrdc	92	54.217	ENSSTOG00000001643	YRDC	88	54.217	Ictidomys_tridecemlineatus
ENSPREG00000005285	yrdc	95	83.794	ENSKMAG00000013468	yrdc	95	83.794	Kryptolebias_marmoratus
ENSPREG00000005285	yrdc	99	80.827	ENSLBEG00000027501	yrdc	99	80.827	Labrus_bergylta
ENSPREG00000005285	yrdc	98	54.182	ENSLACG00000010689	YRDC	94	63.725	Latimeria_chalumnae
ENSPREG00000005285	yrdc	67	30.366	ENSLACG00000017624	si:ch211-153b23.3	58	30.366	Latimeria_chalumnae
ENSPREG00000005285	yrdc	87	66.102	ENSLOCG00000003321	yrdc	97	66.102	Lepisosteus_oculatus
ENSPREG00000005285	yrdc	85	56.710	ENSLAFG00000017556	YRDC	82	56.710	Loxodonta_africana
ENSPREG00000005285	yrdc	75	58.333	ENSMFAG00000003487	YRDC	96	59.804	Macaca_fascicularis
ENSPREG00000005285	yrdc	84	54.825	ENSMMUG00000005372	YRDC	70	51.136	Macaca_mulatta
ENSPREG00000005285	yrdc	84	54.825	ENSMNEG00000029348	YRDC	82	55.844	Macaca_nemestrina
ENSPREG00000005285	yrdc	52	62.238	ENSMLEG00000041122	YRDC	95	64.336	Mandrillus_leucophaeus
ENSPREG00000005285	yrdc	99	76.119	ENSMAMG00000007315	yrdc	100	76.119	Mastacembelus_armatus
ENSPREG00000005285	yrdc	100	77.985	ENSMZEG00005006948	yrdc	100	77.985	Maylandia_zebra
ENSPREG00000005285	yrdc	75	63.547	ENSMGAG00000002833	YRDC	99	63.547	Meleagris_gallopavo
ENSPREG00000005285	yrdc	84	57.018	ENSMICG00000031688	YRDC	82	56.710	Microcebus_murinus
ENSPREG00000005285	yrdc	86	43.162	ENSMOCG00000000164	-	83	43.038	Microtus_ochrogaster
ENSPREG00000005285	yrdc	100	76.030	ENSMMOG00000002119	yrdc	100	76.030	Mola_mola
ENSPREG00000005285	yrdc	75	61.463	ENSMODG00000017750	YRDC	73	61.463	Monodelphis_domestica
ENSPREG00000005285	yrdc	97	77.308	ENSMALG00000012471	yrdc	98	77.308	Monopterus_albus
ENSPREG00000005285	yrdc	79	56.744	MGP_CAROLIEiJ_G0026453	Yrdc	98	66.019	Mus_caroli
ENSPREG00000005285	yrdc	85	56.277	ENSMUSG00000028889	Yrdc	100	66.667	Mus_musculus
ENSPREG00000005285	yrdc	85	57.143	MGP_PahariEiJ_G0028784	Yrdc	100	66.667	Mus_pahari
ENSPREG00000005285	yrdc	85	56.277	MGP_SPRETEiJ_G0027432	Yrdc	82	56.277	Mus_spretus
ENSPREG00000005285	yrdc	75	59.512	ENSMPUG00000014542	YRDC	82	59.512	Mustela_putorius_furo
ENSPREG00000005285	yrdc	75	50.980	ENSMLUG00000028796	-	73	50.980	Myotis_lucifugus
ENSPREG00000005285	yrdc	70	59.896	ENSMLUG00000024310	-	94	59.896	Myotis_lucifugus
ENSPREG00000005285	yrdc	85	56.710	ENSMLUG00000000955	-	82	56.710	Myotis_lucifugus
ENSPREG00000005285	yrdc	75	60.488	ENSNGAG00000019099	Yrdc	73	60.488	Nannospalax_galili
ENSPREG00000005285	yrdc	99	77.736	ENSNBRG00000009475	yrdc	99	77.736	Neolamprologus_brichardi
ENSPREG00000005285	yrdc	84	57.018	ENSNLEG00000011665	YRDC	82	56.710	Nomascus_leucogenys
ENSPREG00000005285	yrdc	75	62.439	ENSMEUG00000005068	YRDC	95	62.439	Notamacropus_eugenii
ENSPREG00000005285	yrdc	84	57.456	ENSODEG00000007401	YRDC	100	65.714	Octodon_degus
ENSPREG00000005285	yrdc	89	84.034	ENSONIG00000016213	yrdc	100	84.034	Oreochromis_niloticus
ENSPREG00000005285	yrdc	85	57.143	ENSOCUG00000005384	YRDC	89	53.788	Oryctolagus_cuniculus
ENSPREG00000005285	yrdc	100	75.926	ENSORLG00000014393	yrdc	100	75.926	Oryzias_latipes
ENSPREG00000005285	yrdc	100	76.119	ENSORLG00020019663	yrdc	100	76.119	Oryzias_latipes_hni
ENSPREG00000005285	yrdc	100	76.119	ENSORLG00015004625	yrdc	100	76.119	Oryzias_latipes_hsok
ENSPREG00000005285	yrdc	100	74.906	ENSOMEG00000018550	yrdc	100	74.906	Oryzias_melastigma
ENSPREG00000005285	yrdc	85	55.844	ENSOGAG00000030474	YRDC	83	55.844	Otolemur_garnettii
ENSPREG00000005285	yrdc	85	55.844	ENSOARG00000019873	YRDC	82	55.844	Ovis_aries
ENSPREG00000005285	yrdc	51	65.957	ENSPPAG00000039722	-	95	65.957	Pan_paniscus
ENSPREG00000005285	yrdc	84	56.579	ENSPPRG00000007752	YRDC	82	56.277	Panthera_pardus
ENSPREG00000005285	yrdc	84	45.188	ENSPTIG00000019821	YRDC	96	45.188	Panthera_tigris_altaica
ENSPREG00000005285	yrdc	84	57.018	ENSPTRG00000000557	YRDC	82	56.710	Pan_troglodytes
ENSPREG00000005285	yrdc	84	54.825	ENSPANG00000006487	YRDC	71	51.136	Papio_anubis
ENSPREG00000005285	yrdc	97	64.259	ENSPKIG00000004574	yrdc	96	64.259	Paramormyrops_kingsleyae
ENSPREG00000005285	yrdc	82	59.459	ENSPSIG00000006483	YRDC	76	59.459	Pelodiscus_sinensis
ENSPREG00000005285	yrdc	95	73.228	ENSPMGG00000004184	yrdc	95	75.410	Periophthalmus_magnuspinnatus
ENSPREG00000005285	yrdc	63	59.884	ENSPEMG00000016985	Yrdc	75	59.884	Peromyscus_maniculatus_bairdii
ENSPREG00000005285	yrdc	64	55.367	ENSPMAG00000002905	yrdc	96	55.367	Petromyzon_marinus
ENSPREG00000005285	yrdc	90	54.032	ENSPCIG00000025731	YRDC	89	54.077	Phascolarctos_cinereus
ENSPREG00000005285	yrdc	100	97.753	ENSPFOG00000023097	yrdc	100	97.753	Poecilia_formosa
ENSPREG00000005285	yrdc	100	97.378	ENSPLAG00000020882	yrdc	100	97.378	Poecilia_latipinna
ENSPREG00000005285	yrdc	99	97.736	ENSPMEG00000013237	yrdc	100	97.736	Poecilia_mexicana
ENSPREG00000005285	yrdc	75	60.488	ENSPPYG00000001523	-	84	60.488	Pongo_abelii
ENSPREG00000005285	yrdc	87	56.170	ENSPCAG00000016850	YRDC	83	56.170	Procavia_capensis
ENSPREG00000005285	yrdc	84	57.018	ENSPCOG00000013214	YRDC	82	56.710	Propithecus_coquereli
ENSPREG00000005285	yrdc	92	54.217	ENSPVAG00000010147	YRDC	89	54.217	Pteropus_vampyrus
ENSPREG00000005285	yrdc	100	77.985	ENSPNYG00000013956	yrdc	100	77.985	Pundamilia_nyererei
ENSPREG00000005285	yrdc	84	71.556	ENSPNAG00000015625	yrdc	92	71.556	Pygocentrus_nattereri
ENSPREG00000005285	yrdc	84	56.388	ENSRNOG00000025424	Yrdc	82	55.844	Rattus_norvegicus
ENSPREG00000005285	yrdc	84	55.263	ENSRBIG00000032289	YRDC	94	51.515	Rhinopithecus_bieti
ENSPREG00000005285	yrdc	82	54.148	ENSRROG00000039370	YRDC	78	55.459	Rhinopithecus_roxellana
ENSPREG00000005285	yrdc	72	61.421	ENSSBOG00000018937	YRDC	84	61.421	Saimiri_boliviensis_boliviensis
ENSPREG00000005285	yrdc	52	63.889	ENSSHAG00000013957	-	97	63.889	Sarcophilus_harrisii
ENSPREG00000005285	yrdc	81	69.266	ENSSFOG00015006128	yrdc	94	69.266	Scleropages_formosus
ENSPREG00000005285	yrdc	89	79.412	ENSSMAG00000005195	yrdc	97	77.734	Scophthalmus_maximus
ENSPREG00000005285	yrdc	53	32.450	ENSSDUG00000006736	-	77	32.450	Seriola_dumerili
ENSPREG00000005285	yrdc	99	78.788	ENSSDUG00000009775	yrdc	99	78.788	Seriola_dumerili
ENSPREG00000005285	yrdc	99	78.788	ENSSLDG00000003196	yrdc	99	78.788	Seriola_lalandi_dorsalis
ENSPREG00000005285	yrdc	80	60.829	ENSSPUG00000003946	YRDC	84	60.829	Sphenodon_punctatus
ENSPREG00000005285	yrdc	100	76.404	ENSSPAG00000012559	yrdc	100	76.404	Stegastes_partitus
ENSPREG00000005285	yrdc	84	57.895	ENSSSCG00000040425	YRDC	88	55.020	Sus_scrofa
ENSPREG00000005285	yrdc	53	66.438	ENSTGUG00000001507	YRDC	99	66.438	Taeniopygia_guttata
ENSPREG00000005285	yrdc	94	69.804	ENSTRUG00000005923	yrdc	94	70.196	Takifugu_rubripes
ENSPREG00000005285	yrdc	56	61.039	ENSTBEG00000008863	YRDC	98	61.039	Tupaia_belangeri
ENSPREG00000005285	yrdc	51	66.667	ENSTTRG00000013538	-	95	66.667	Tursiops_truncatus
ENSPREG00000005285	yrdc	73	62.312	ENSUAMG00000006150	YRDC	98	62.312	Ursus_americanus
ENSPREG00000005285	yrdc	85	44.156	ENSVPAG00000006642	YRDC	97	44.156	Vicugna_pacos
ENSPREG00000005285	yrdc	76	65.385	ENSXETG00000014420	yrdc	87	65.385	Xenopus_tropicalis
ENSPREG00000005285	yrdc	89	93.697	ENSXCOG00000000829	yrdc	100	93.697	Xiphophorus_couchianus
ENSPREG00000005285	yrdc	100	95.880	ENSXMAG00000014606	yrdc	95	95.880	Xiphophorus_maculatus