EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005292 (Gene tree)
Gene ID: 103476005
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9027 bases
Position: chrLG14:15522003-15531029
Accession: 103476005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007720	zf-C2H2	PF00096.26	4.8e-18	1	2
ENSPREP00000007720	zf-C2H2	PF00096.26	4.8e-18	2	2
ENSPREP00000007720	zf-met	PF12874.7	1.3e-10	1	2
ENSPREP00000007720	zf-met	PF12874.7	1.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007812	-	7358	XM_008428021	ENSPREP00000007720	1210 (aa)	XP_008426243	UPI0004A4B362

Gene Model

Click here to download ENSPREG00000005292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005292	si:ch211-212k18.5	56	68.750	ENSPREG00000021908	sall2	55	49.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005292	si:ch211-212k18.5	72	67.568	ENSAPOG00000015347	sall2	55	67.568	Acanthochromis_polyacanthus
ENSPREG00000005292	si:ch211-212k18.5	99	74.288	ENSAPOG00000013387	si:ch211-212k18.5	99	73.786	Acanthochromis_polyacanthus
ENSPREG00000005292	si:ch211-212k18.5	80	80.000	ENSACIG00000019922	si:ch211-212k18.5	99	81.011	Amphilophus_citrinellus
ENSPREG00000005292	si:ch211-212k18.5	99	72.461	ENSAOCG00000010737	si:ch211-212k18.5	99	72.461	Amphiprion_ocellaris
ENSPREG00000005292	si:ch211-212k18.5	54	46.076	ENSAPEG00000020215	sall2	68	49.120	Amphiprion_percula
ENSPREG00000005292	si:ch211-212k18.5	99	72.705	ENSAPEG00000006751	si:ch211-212k18.5	99	72.705	Amphiprion_percula
ENSPREG00000005292	si:ch211-212k18.5	54	45.956	ENSATEG00000007303	sall2	63	67.568	Anabas_testudineus
ENSPREG00000005292	si:ch211-212k18.5	79	81.512	ENSATEG00000001254	si:ch211-212k18.5	99	81.744	Anabas_testudineus
ENSPREG00000005292	si:ch211-212k18.5	55	48.072	ENSACLG00000019867	sall2	61	45.408	Astatotilapia_calliptera
ENSPREG00000005292	si:ch211-212k18.5	99	72.578	ENSACLG00000009709	si:ch211-212k18.5	99	72.445	Astatotilapia_calliptera
ENSPREG00000005292	si:ch211-212k18.5	54	48.857	ENSAMXG00000020956	sall2	57	48.988	Astyanax_mexicanus
ENSPREG00000005292	si:ch211-212k18.5	95	56.518	ENSAMXG00000010979	si:ch211-212k18.5	99	54.913	Astyanax_mexicanus
ENSPREG00000005292	si:ch211-212k18.5	82	38.971	ENSCSEG00000021148	sall2	55	55.769	Cynoglossus_semilaevis
ENSPREG00000005292	si:ch211-212k18.5	99	68.204	ENSCSEG00000004426	si:ch211-212k18.5	99	68.042	Cynoglossus_semilaevis
ENSPREG00000005292	si:ch211-212k18.5	57	65.000	ENSCVAG00000006032	sall2	52	55.769	Cyprinodon_variegatus
ENSPREG00000005292	si:ch211-212k18.5	99	87.097	ENSCVAG00000007475	si:ch211-212k18.5	99	87.097	Cyprinodon_variegatus
ENSPREG00000005292	si:ch211-212k18.5	99	53.055	ENSDARG00000103316	si:ch211-212k18.5	99	52.016	Danio_rerio
ENSPREG00000005292	si:ch211-212k18.5	99	56.010	ENSELUG00000024534	si:ch211-212k18.5	99	55.476	Esox_lucius
ENSPREG00000005292	si:ch211-212k18.5	99	88.089	ENSFHEG00000017264	si:ch211-212k18.5	99	88.089	Fundulus_heteroclitus
ENSPREG00000005292	si:ch211-212k18.5	100	94.545	ENSGAFG00000003746	si:ch211-212k18.5	100	93.802	Gambusia_affinis
ENSPREG00000005292	si:ch211-212k18.5	71	44.246	ENSHBUG00000002882	sall2	55	45.408	Haplochromis_burtoni
ENSPREG00000005292	si:ch211-212k18.5	99	72.742	ENSHBUG00000019672	si:ch211-212k18.5	100	72.759	Haplochromis_burtoni
ENSPREG00000005292	si:ch211-212k18.5	98	58.828	ENSHCOG00000002842	si:ch211-212k18.5	99	57.692	Hippocampus_comes
ENSPREG00000005292	si:ch211-212k18.5	99	52.054	ENSIPUG00000002559	sall2	99	51.383	Ictalurus_punctatus
ENSPREG00000005292	si:ch211-212k18.5	56	69.697	ENSKMAG00000020172	sall2	50	55.102	Kryptolebias_marmoratus
ENSPREG00000005292	si:ch211-212k18.5	100	74.328	ENSKMAG00000019657	si:ch211-212k18.5	100	74.328	Kryptolebias_marmoratus
ENSPREG00000005292	si:ch211-212k18.5	100	69.112	ENSLBEG00000020887	si:ch211-212k18.5	99	68.923	Labrus_bergylta
ENSPREG00000005292	si:ch211-212k18.5	57	68.571	ENSMAMG00000016229	sall2	63	56.863	Mastacembelus_armatus
ENSPREG00000005292	si:ch211-212k18.5	70	85.047	ENSMAMG00000015887	si:ch211-212k18.5	99	84.346	Mastacembelus_armatus
ENSPREG00000005292	si:ch211-212k18.5	71	44.246	ENSMZEG00005012103	sall2	55	45.408	Maylandia_zebra
ENSPREG00000005292	si:ch211-212k18.5	99	72.660	ENSMZEG00005021214	si:ch211-212k18.5	99	72.527	Maylandia_zebra
ENSPREG00000005292	si:ch211-212k18.5	94	80.674	ENSMMOG00000012726	si:ch211-212k18.5	98	80.000	Mola_mola
ENSPREG00000005292	si:ch211-212k18.5	92	73.629	ENSMALG00000000979	si:ch211-212k18.5	97	73.473	Monopterus_albus
ENSPREG00000005292	si:ch211-212k18.5	97	67.253	ENSNBRG00000023948	si:ch211-212k18.5	99	66.639	Neolamprologus_brichardi
ENSPREG00000005292	si:ch211-212k18.5	55	44.805	ENSORLG00000026871	sall2	60	46.335	Oryzias_latipes
ENSPREG00000005292	si:ch211-212k18.5	99	69.950	ENSORLG00000030429	si:ch211-212k18.5	99	69.868	Oryzias_latipes
ENSPREG00000005292	si:ch211-212k18.5	99	69.594	ENSORLG00020008145	si:ch211-212k18.5	99	69.950	Oryzias_latipes_hni
ENSPREG00000005292	si:ch211-212k18.5	54	45.191	ENSORLG00020007873	sall2	60	46.073	Oryzias_latipes_hni
ENSPREG00000005292	si:ch211-212k18.5	99	68.931	ENSORLG00015004982	si:ch211-212k18.5	99	69.785	Oryzias_latipes_hsok
ENSPREG00000005292	si:ch211-212k18.5	54	44.796	ENSORLG00015002422	sall2	60	45.942	Oryzias_latipes_hsok
ENSPREG00000005292	si:ch211-212k18.5	99	68.822	ENSOMEG00000013949	si:ch211-212k18.5	99	70.337	Oryzias_melastigma
ENSPREG00000005292	si:ch211-212k18.5	54	45.684	ENSOMEG00000012904	sall2	61	45.722	Oryzias_melastigma
ENSPREG00000005292	si:ch211-212k18.5	71	50.484	ENSPKIG00000009207	sall2	67	44.360	Paramormyrops_kingsleyae
ENSPREG00000005292	si:ch211-212k18.5	94	64.921	ENSPMGG00000018714	si:ch211-212k18.5	99	64.454	Periophthalmus_magnuspinnatus
ENSPREG00000005292	si:ch211-212k18.5	75	46.988	ENSPFOG00000016504	sall2	60	47.500	Poecilia_formosa
ENSPREG00000005292	si:ch211-212k18.5	100	96.942	ENSPFOG00000023705	si:ch211-212k18.5	100	96.942	Poecilia_formosa
ENSPREG00000005292	si:ch211-212k18.5	75	47.333	ENSPLAG00000018320	sall2	51	49.153	Poecilia_latipinna
ENSPREG00000005292	si:ch211-212k18.5	100	97.025	ENSPLAG00000002577	si:ch211-212k18.5	100	97.025	Poecilia_latipinna
ENSPREG00000005292	si:ch211-212k18.5	100	96.942	ENSPMEG00000016395	si:ch211-212k18.5	100	96.942	Poecilia_mexicana
ENSPREG00000005292	si:ch211-212k18.5	75	47.067	ENSPMEG00000006335	sall2	51	49.153	Poecilia_mexicana
ENSPREG00000005292	si:ch211-212k18.5	99	69.130	ENSPNYG00000021576	si:ch211-212k18.5	99	68.602	Pundamilia_nyererei
ENSPREG00000005292	si:ch211-212k18.5	96	55.855	ENSPNAG00000006123	si:ch211-212k18.5	95	55.751	Pygocentrus_nattereri
ENSPREG00000005292	si:ch211-212k18.5	74	53.846	ENSSMAG00000014157	sall2	71	53.846	Scophthalmus_maximus
ENSPREG00000005292	si:ch211-212k18.5	100	70.837	ENSSMAG00000006241	si:ch211-212k18.5	99	70.488	Scophthalmus_maximus
ENSPREG00000005292	si:ch211-212k18.5	100	74.494	ENSSDUG00000006164	si:ch211-212k18.5	100	74.413	Seriola_dumerili
ENSPREG00000005292	si:ch211-212k18.5	100	76.194	ENSSLDG00000003393	si:ch211-212k18.5	99	76.094	Seriola_lalandi_dorsalis
ENSPREG00000005292	si:ch211-212k18.5	79	40.760	ENSSPAG00000023009	sall2	61	50.769	Stegastes_partitus
ENSPREG00000005292	si:ch211-212k18.5	97	71.883	ENSSPAG00000013435	si:ch211-212k18.5	97	73.512	Stegastes_partitus
ENSPREG00000005292	si:ch211-212k18.5	58	45.935	ENSTRUG00000024556	sall2	51	47.475	Takifugu_rubripes
ENSPREG00000005292	si:ch211-212k18.5	87	75.913	ENSTRUG00000025082	si:ch211-212k18.5	98	74.429	Takifugu_rubripes
ENSPREG00000005292	si:ch211-212k18.5	99	92.167	ENSXCOG00000000762	si:ch211-212k18.5	100	92.238	Xiphophorus_couchianus
ENSPREG00000005292	si:ch211-212k18.5	99	94.583	ENSXMAG00000001461	si:ch211-212k18.5	100	94.467	Xiphophorus_maculatus